| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3944978 | NA (NA) | 54 (0.560) | 14/166 | NT | 65.1% | noncoding (1275/2904 nt) | rrlC | 23S ribosomal RNA of rrnC operon |
| ? | NC_000913 | = 4038811 | 31 (0.300) | noncoding (1293/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon | |||||
Only 100 of 140 total aligned reads displayed.
GCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGTCGATGGGAAACAGGTTAA > NC_000913/4038712‑4038910 | cGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTc < 2:919786/100‑1 (MQ=33) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg > 2:383465/1‑100 (MQ=33) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg > 2:2639344/1‑100 (MQ=33) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg > 2:2347996/1‑100 (MQ=33) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg < 2:2118255/100‑1 (MQ=32) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg > 2:706233/1‑100 (MQ=32) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg > 1:2411778/1‑100 (MQ=33) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCg > 2:833552/1‑100 (MQ=33) gTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCT < 1:2104136‑M2/98‑1 (MQ=255) tCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGcc < 2:356961/100‑1 (MQ=33) tCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGcc < 2:2215756/100‑1 (MQ=33) cTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCg < 2:2680127/100‑1 (MQ=33) cTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCg < 2:597271/100‑1 (MQ=32) tGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCgg > 2:570027/1‑100 (MQ=33) tGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCgg > 1:523379/1‑100 (MQ=33) gTAAGCCTGTGACGGTGTGATGTGAGGCCTGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGa < 2:1267341/100‑1 (MQ=255) gTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGa > 2:288406/1‑100 (MQ=32) gTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGa < 2:531351/100‑1 (MQ=33) gTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGa > 1:275375/1‑100 (MQ=32) gTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGa > 2:1346563/1‑100 (MQ=33) tAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGaa < 1:1464231/100‑1 (MQ=32) tAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGaa > 2:611954/1‑100 (MQ=33) aaGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAg < 1:2568899/100‑1 (MQ=32) aaGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAg > 1:1088206/1‑100 (MQ=33) aaGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAg < 2:1411373/100‑1 (MQ=33) aGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCTCGCTCGCCGGAAGa > 1:404343/1‑100 (MQ=18) aGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTttatcgttac < 2:2192561‑M2/100‑11 (MQ=255) aGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGa < 2:98144/100‑1 (MQ=33) aGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGa > 2:2560065/1‑100 (MQ=32) aGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGa > 2:2215719/1‑100 (MQ=33) gCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAc > 2:2083226/1‑100 (MQ=33) ccTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGGCCGCTCGCCGGAAGAcc > 2:1172025/1‑100 (MQ=17) ccTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAcc > 2:1906532/1‑100 (MQ=32) tgtgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCaa > 1:2314307/1‑100 (MQ=32) gtgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAg > 1:450716/1‑100 (MQ=31) tgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAgg < 1:2007478/100‑1 (MQ=11) tgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAgg < 2:264040/100‑1 (MQ=11) tgAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAgg < 1:1364750/100‑1 (MQ=11) aaGTAACGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatacctcacagtacaccttcacagg < 1:903895‑M2/100‑70 (MQ=255) aGTAACGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcagg < 1:1643500‑M2/99‑70 (MQ=255) gatctgataaaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggct > 1:751157‑M2/6‑29 (MQ=255) gTAACGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggct < 2:2336416‑M2/100‑72 (MQ=255) gTAACGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatacctcacagtacaccttcacaggct < 2:702113‑M2/100‑72 (MQ=255) aaCGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatacctcacagtacaccttcacaggctta < 2:535537‑M2/100‑74 (MQ=255) aCGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttac < 1:1142216‑M2/100‑75 (MQ=255) aCGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttac < 1:1951579‑M2/100‑75 (MQ=255) aCGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggcttac < 2:1298443‑M2/100‑75 (MQ=255) cGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtccgcattcgcacttcttatacctccaccatgcctcacagcacaccttcacaggcttaca < 1:364021‑M2/100‑76 (MQ=255) cGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttaca < 1:1971820‑M2/100‑76 (MQ=255) cGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttaca < 1:162125‑M2/100‑76 (MQ=255) cGATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttaca < 2:644418‑M2/100‑76 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatccctccagcatgcctcacagcacaccttcgcaggcttacag < 2:1005281‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacag < 1:2404385‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacag < 2:1560453‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacag < 2:1776596‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacag < 1:2609374‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggcttacag < 2:1466747‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggctagatc < 2:751160‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatacctcacagtacaccttcacaggcttacag < 2:442744‑M2/100‑77 (MQ=255) gATAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatacctcacagtacaccttcacaggcttacag < 1:942588‑M2/100‑77 (MQ=255) aTAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacaga < 1:609419‑M2/100‑78 (MQ=255) aTAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggcttacaga < 1:238807‑M2/100‑78 (MQ=255) aTAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcagtcgcacttctgatacctccagcatagctcacagcacaccttcgcaggcttacaga < 1:2619132‑M2/100‑78 (MQ=255) tAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggcttacagaa < 1:2868753‑M2/100‑79 (MQ=255) tAAAGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatacctcacagtacaccttcacaggcttacagaa < 1:557839‑M2/100‑79 (MQ=255) aaaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaac > 2:1699476‑M2/1‑21 (MQ=255) aaaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaac < 1:1699469‑M2/100‑80 (MQ=255) aaaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaagcttacagaa < 2:146671‑M2/99‑79 (MQ=255) aaaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatacctcacagtacaccttcacaggcttacagaac < 2:1870571‑M2/100‑80 (MQ=255) aaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacggcacaccttcacaggcttacagaacg < 1:377728‑M2/100‑81 (MQ=255) aaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacg < 2:1365885‑M2/100‑81 (MQ=255) aaGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggcttacagaacg < 2:2641970‑M2/100‑81 (MQ=255) aGCGGGTGAAAAGCCCGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcacaggcttacagaacgc < 2:405719‑M2/100‑82 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcccttctgctacctccagcattcctcacagcacaccttcgcaggcttccagaacgctcccctaccca < 1:1595176‑M2/98‑93 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac < 2:2054901‑M2/100‑95 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac > 2:2006604‑M2/1‑6 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac > 2:1083069‑M2/1‑6 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac > 2:2852098‑M2/1‑6 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac > 2:1186478‑M2/1‑6 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac < 2:2026103‑M2/100‑95 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac > 2:2405155‑M2/1‑6 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaac > 2:1941839‑M2/1‑6 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcagccttacagaacgctcccctacccaac > 2:2168919‑M2/1‑6 (MQ=255) cccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgccccacagcacaccttcgcaggcttacagaacgctcccctacccaac > 2:1445461‑M2/1‑6 (MQ=255) cccGCTttatccttccttctgtcagcatccgcacttctgatacctccagcatgcctcacagcaagctttcgcaggcttacagaacgctcccctacccaac < 1:2393974‑M2/100‑95 (MQ=255) ccGCTttatcgttacttatttcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaaca > 1:2232232‑M2/1‑5 (MQ=255) ccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaaca < 2:1538701‑M2/100‑96 (MQ=255) ccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaaca < 2:1129966‑M2/100‑96 (MQ=255) ccGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacactcccctacccaaca > 2:307370‑M2/1‑5 (MQ=255) cGCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaa > 1:1140702‑M2/1‑4 (MQ=255) gCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaac > 2:2891448‑M2/1‑3 (MQ=255) gCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaac > 2:2581587‑M2/1‑3 (MQ=255) gCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaac > 2:499999‑M2/1‑3 (MQ=255) gCTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaac > 1:619776‑M2/1‑3 (MQ=255) cTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaacg > 2:1146597‑M2/1‑2 (MQ=255) cTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaacg < 2:1021784‑M2/100‑99 (MQ=255) cTttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaacg > 1:2439195‑M2/1‑2 (MQ=255) tttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaacgc > 2:2087789‑M2/1‑1 (MQ=255) tttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaacgc > 1:963149‑M2/1‑1 (MQ=255) tttatcgttacttatgtcagcattcgcacttctgatacctccagcatgcctcacagcacaccttcgcaggcttacagaacgctcccctacccaacaacgc < 1:762543‑M2/100‑100 (MQ=255) | GCGTTCTGTAAGCCTGTGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGTCGATGGGAAACAGGTTAA > NC_000913/4038712‑4038910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |