New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4326031 =212 (2.040)70 (0.730) 9/164 NT 26.7% noncoding (230/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 4326213 = 189 (1.980)noncoding (412/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 381 total aligned reads displayed.

AGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGAT  >  NC_000913/4326114‑4326312
                                                                                                   |                                                                                                   
aGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa                                                                                                     >  1:1767728/1‑100 (MQ=38)
aGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa                                                                                                     <  2:1355284/100‑1 (MQ=38)
aGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATa                                                                                                     <  2:128222/100‑1 (MQ=35)
   cgcgCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGa                                                                                                  <  2:2488186/100‑1 (MQ=38)
   cgcgCAAGCGCCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAg                                                                                                   <  1:2110100/99‑1 (MQ=25)
    gcgcACGCGCCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAc                                                                                                 <  2:144327/100‑1 (MQ=255)
     cgcAAGCGTCGTATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAAGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcg                                                                                                >  1:1529659/1‑100 (MQ=255)
      gcAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgc                                                                                               >  2:2900543/1‑100 (MQ=38)
      gcAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAGTTGTAGGCCTGATAAGAcgc                                                                                               >  1:781056/1‑100 (MQ=38)
       cAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgcg                                                                                              >  1:86947/1‑100 (MQ=35)
       cAAGCGTAGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGAcgcg                                                                                              <  2:292027/100‑1 (MQ=25)
        aaGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACgcgc                                                                                             <  2:1195052/100‑1 (MQ=35)
         cgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgccgactgcctgatAAGACGCGCa                                                                                            >  2:1516208‑M2/91‑100 (MQ=255)
         aGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGCTAAGAcgc                                                                                               >  1:1264148/1‑97 (MQ=18)
          gCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCaa                                                                                           >  1:334582/1‑100 (MQ=32)
           cGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAg                                                                                          >  1:504999/1‑100 (MQ=33)
            gTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGc                                                                                         >  2:2061799/1‑100 (MQ=33)
             tCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCg                                                                                        <  2:239408/100‑1 (MQ=33)
              cGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt                                                                                       >  1:145023/1‑100 (MQ=33)
              cGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGt                                                                                       >  1:2809756/1‑100 (MQ=33)
               gCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCCAGCGTc                                                                                      >  2:1686138/1‑100 (MQ=18)
               gCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc                                                                                      <  2:1812933/100‑1 (MQ=32)
               gCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTc                                                                                      <  2:2159003/100‑1 (MQ=33)
               gCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTAGTAGGCCTGATAGGACGCGCAAGCGt                                                                                       >  1:276640/1‑99 (MQ=16)
                cATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg                                                                                     >  2:440561/1‑100 (MQ=33)
                cATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCg                                                                                     <  2:2298018/100‑1 (MQ=33)
                   caggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatACGACGCGCGCGCGTCGCAt                                                                                  >  1:1149569‑M2/81‑100 (MQ=255)
                    aGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATc                                                                                 >  2:550911/1‑100 (MQ=32)
                    aGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATc                                                                                 <  2:2738779/100‑1 (MQ=32)
                    aGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATc                                                                                 >  2:1456018/1‑100 (MQ=32)
                     ggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCa                                                                                <  2:2127300‑M2/22‑1 (MQ=255)
                     ggCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGTATTTGGAGGCCTGAAAAGACGCGCAAGCGTCGCAt                                                                                  >  1:1971180/1‑98 (MQ=255)
                     ggCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                >  2:190945/1‑100 (MQ=33)
                     ggCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                >  2:887236/1‑100 (MQ=33)
                     ggCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                >  1:2254190/1‑100 (MQ=33)
                     ggCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                                                                                <  1:2869849/100‑1 (MQ=32)
                      gCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAg                                                                               >  2:1004816/1‑100 (MQ=33)
                       cctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatGCGACGCGCAAGCGTCGCATCAgg                                                                              <  2:1380387‑M2/24‑1 (MQ=255)
                       cAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg                                                                              >  2:2796166/1‑100 (MQ=32)
                        ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCAGGc                                                                             <  2:2408199‑M2/25‑1 (MQ=255)
                        ctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  2:690015‑M2/25‑1 (MQ=255)
                        ccgatctttcccgcaccatccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  1:581638‑M2/25‑1 (MQ=255)
                        caacacattcccgcgccatccgtagcccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGc                                                                             <  2:1901084‑M2/25‑1 (MQ=255)
                        aGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGCGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc                                                                             >  1:1395242/1‑100 (MQ=17)
                         gTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCa                                                                            >  2:2430497/1‑100 (MQ=32)
                         gTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCa                                                                            >  1:1006498/1‑100 (MQ=32)
                          acaagttcccgcaccctccggaggccggataaggcgtttacgccgcatccggcaacagtgccaacggcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  1:2530970‑M2/27‑1 (MQ=255)
                          acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  1:2358384‑M2/27‑1 (MQ=255)
                          acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  2:1297739‑M2/27‑1 (MQ=255)
                          acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  2:840087‑M2/27‑1 (MQ=255)
                          acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCAGGCAg                                                                           <  2:164281‑M2/27‑1 (MQ=255)
                          acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  2:465745‑M2/27‑1 (MQ=255)
                           caattccccgccccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  1:2414460‑M2/27‑1 (MQ=255)
                            aaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAg                                                                           <  1:620279‑M2/27‑1 (MQ=255)
                            aaattcccgcaccatccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTc                                                                         <  2:1873924‑M2/29‑1 (MQ=255)
                            aaatgcccccaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCAGGc                                                                             <  2:1696520‑M2/25‑1 (MQ=255)
                              attcccgcgccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCgg                                                                       <  1:2024096‑M2/31‑1 (MQ=255)
                              attcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCGAGCGTCGCATCAGGCAGTCgg                                                                       <  2:2207361‑M2/31‑1 (MQ=255)
                               ttcccgcaccatccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactgcctgatAAGACGCGCAAGCGTCGCATCaggcagatcgg                                                                      >  2:581641‑M2/69‑95 (MQ=255)
                                   cgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactgcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTTGGcactg                                                                  <  1:1651264‑M2/36‑3 (MQ=255)
                                                                           ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGGCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAg                          <  1:1381062/100‑1 (MQ=11)
                                                                           ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAg                          >  2:2563202/1‑100 (MQ=11)
                                                                            gTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAgg                         <  2:2474052/100‑1 (MQ=31)
                                                                            gTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAgg                         <  1:369154/100‑1 (MQ=31)
                                                                             tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAggg                        >  2:2523273/1‑100 (MQ=32)
                                                                              gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGt                       <  1:1602683/100‑1 (MQ=32)
                                                                               cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGACAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTg                      >  2:2097266/1‑100 (MQ=18)
                                                                                gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGc                     <  1:10816/100‑1 (MQ=33)
                                                                                gggAATTTGTAGGCCTGATAAGACGCGCAAGCGGCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTCCGGAGGGAGc                     >  1:1917512/1‑100 (MQ=255)
                                                                                 ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAGCGCCTTATCCGGCCTACGGAggg                        >  1:391081/1‑96 (MQ=17)
                                                                                 ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCg                    <  2:1754657/100‑1 (MQ=33)
                                                                                 ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCg                    >  2:2755642/1‑100 (MQ=33)
                                                                                  gAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGcgcg                    >  1:2437556/1‑99 (MQ=17)
                                                                                    aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                 <  2:1730885/100‑1 (MQ=33)
                                                                                    aTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                 <  2:1061226/100‑1 (MQ=33)
                                                                                     tttGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                 >  2:1033691/1‑99 (MQ=33)
                                                                                      ttGTAGGCCTGTTAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa                 <  1:1500873/98‑1 (MQ=18)
                                                                                        gtcggCCGGAAAAGACGCGCAAGCACCGCCTTACCCAGTCGGCCCCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt             <  1:466511/97‑1 (MQ=11)
                                                                                        gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt             >  2:722074/1‑100 (MQ=33)
                                                                                         tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCAGCGTAAACGCCTTATCCGGCCTACGGAGTGTGCGGGAAttag            <  2:1976131/100‑3 (MQ=255)
                                                                                          aGGCCTGAGAGGACGCGCAAGCGTCGCATCAGGCAGTCGGCACGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGt           <  1:1303561/100‑1 (MQ=255)
                                                                                           ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTCAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTg            >  1:561967/1‑98 (MQ=17)
                                                                                           ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa          >  1:2913037/1‑100 (MQ=32)
                                                                                            gcctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg         <  1:722071‑M2/93‑1 (MQ=255)
                                                                                             cctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        <  2:2019103‑M2/94‑1 (MQ=255)
                                                                                             cctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        <  2:1927192‑M2/94‑1 (MQ=255)
                                                                                             cctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        >  2:354853‑M2/7‑100 (MQ=255)
                                                                                             cctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        <  1:2505129‑M2/94‑1 (MQ=255)
                                                                                             cctgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAgg        >  2:601000‑M2/7‑100 (MQ=255)
                                                                                             cctgacAAGGCGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGAGGGTGCGGGAATTTGTAg         <  1:1686814‑M2/93‑1 (MQ=255)
                                                                                               tgatAAGACGCGCACGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc      <  1:2666463‑M2/96‑1 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc      >  2:1081802‑M2/5‑100 (MQ=255)
                                                                                               tgatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGcc      >  2:2846729‑M2/5‑100 (MQ=255)
                                                                                                gatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt     <  2:2667136‑M2/97‑1 (MQ=255)
                                                                                                gatAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCt     >  2:1228993‑M2/4‑100 (MQ=255)
                                                                                                 atAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTg    >  1:1879379‑M2/3‑100 (MQ=255)
                                                                                                  tAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGa   >  2:1327534‑M2/2‑100 (MQ=255)
                                                                                                  tAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGa   >  2:1591717‑M2/2‑100 (MQ=255)
                                                                                                  tAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGa   <  2:2343304‑M2/99‑1 (MQ=255)
                                                                                                   aaGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGAt  >  2:2589195/1‑100 (MQ=33)
                                                                                                   |                                                                                                   
AGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGAT  >  NC_000913/4326114‑4326312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.