BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4557049 =	115 (1.110)	9 (0.100)	8/162	NT	8.2%	coding (57/393 nt)	iraD	RpoS stabilzer after DNA damage, anti‑RssB factor
*	?	NC_000913	4557077 =	97 (1.030)	9 (0.100)	8/162	NT	8.2%	coding (85/393 nt)	iraD	RpoS stabilzer after DNA damage, anti‑RssB factor
Rejected: Frequency below cutoff threshold.

Only 100 of 140 total aligned reads displayed.

TCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCT  >  NC_000913/4556978‑4557174

tCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAtc                                                                                                   >  1:577554/1‑100 (MQ=255)

  aGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGAtctc                                                                                                 <  2:1101638/100‑1 (MQ=255)

   ggAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATctcc                                                                                                >  1:198567/1‑100 (MQ=255)

   ggAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATctcc                                                                                                <  1:1861612/100‑1 (MQ=255)

   cactcgggcatgcctgaaacaagtaatgacggtaatgccgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGAtct                                                                                                  >  1:2024900‑M1/69‑98 (MQ=255)

   cactcgggcatgcctgaaacaagtaatgacggtaatgccgaatgaggagaattaaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGATctcc                                                                                                >  1:1867808‑M1/69‑100 (MQ=255)

     aGTGCGCAAAATGATGTGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATctcctc                                                                                              <  1:2497445/100‑1 (MQ=255)

        gcgcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCAct                                                                                           >  2:2832783/1‑100 (MQ=255)

          gcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCActct                                                                                         >  2:1193365/1‑100 (MQ=255)

          gcAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCActct                                                                                         >  2:1741310/1‑100 (MQ=255)

            aaaaTGATGCGACCATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATACAACGTCATCTCTGCGTCAATCGGCATGCAGCGATCTCCTCACCCttt                                                                                       >  1:725773/1‑100 (MQ=255)

            aaaaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCttt                                                                                       >  1:781613/1‑100 (MQ=255)

             aaaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCtttt                                                                                      <  1:1354980/100‑1 (MQ=255)

              aaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTTCTCACTCttttt                                                                                     <  1:1346992/100‑1 (MQ=255)

              aaTGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCttttt                                                                                     <  2:2126355/100‑1 (MQ=255)

               attatgAGACAATCACTTCAAGCTATTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCttttt                                                                                     <  1:1986330/96‑1 (MQ=255)

                tgatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTaa                                                                                   <  2:2652818/100‑1 (MQ=255)

                 gatgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAt                                                                                  <  2:2359275/100‑1 (MQ=255)

                  atgCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAAtt                                                                                 >  2:672402/1‑100 (MQ=255)

                    gCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATtct                                                                               >  2:407188/1‑100 (MQ=255)

                     cGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCCATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTCTTTAATtctc                                                                              >  1:1699688/1‑100 (MQ=255)

                      gACAATCACTTCTGGTGGTTTTGCCTGAAATTTCAGGCAGTGTAGCGTCATCGTTGTGTAGATCGGTATGCAGTGATCTCGTCACTCTTTTGGATTctcc                                                                             <  1:371406/100‑1 (MQ=255)

                      gACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTctcc                                                                             <  2:2114880/100‑1 (MQ=255)

                       aCAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTctcct                                                                            <  2:2577865/100‑1 (MQ=255)

                        cAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTTCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTctcctc                                                                           <  1:1271284/100‑1 (MQ=255)

                        cAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTctcctc                                                                           <  1:483393/100‑1 (MQ=255)

                         aaTCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCa                                                                          >  1:2304914/1‑100 (MQ=255)

                           tCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCAtt                                                                        >  1:206718/1‑100 (MQ=255)

                            cACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTc                                                                       <  2:425867/100‑1 (MQ=255)

                              cTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCgg                                                                     >  1:288224/1‑100 (MQ=255)

                              cTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCg                                                                      >  1:2511404/1‑99 (MQ=255)

                               ttCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGc                                                                    <  2:1913131/100‑1 (MQ=255)

                                tCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTTTTTTTCCTCTTTCCGc                                                                    >  1:2146980/1‑99 (MQ=255)

                                tCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCa                                                                   >  1:1032710/1‑100 (MQ=255)

                                tCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCa                                                                   >  1:2588940/1‑100 (MQ=255)

                                 cAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCAt                                                                  >  1:356568/1‑100 (MQ=255)

                                   ggCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTa                                                                >  2:631088/1‑100 (MQ=255)

                                   ggCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTa                                                                >  2:768957/1‑100 (MQ=255)

                                   ggCTGTTCTACCCAAAATTTCAAGCAATAAAACTTCCTCGCTGCGTAAATCGGTTTGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGc                                                                    <  1:1141527/96‑1 (MQ=255)

                                      tGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCg                                                             <  2:947580/100‑1 (MQ=255)

                                      tGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCg                                                             <  1:2119151/100‑1 (MQ=255)

                                        ttttACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGt                                                            <  2:1152207/99‑1 (MQ=255)

                                         tttACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCa                                                          >  2:2123794/1‑100 (MQ=255)

                                         tttACCGGAAATTTTAAACAATAAAACGTTATCGCTTCATAAATCGGTATTCTGCAATCTCCTTACTCTTTTTAATACTCCTCATTCGGCATTAACGTc                                                           <  1:825470/99‑1 (MQ=255)

                                              cTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACt                                                     >  2:921961/1‑100 (MQ=255)

                                              cTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACt                                                     >  2:2798846/1‑100 (MQ=255)

                                              cTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACt                                                     >  2:2138008/1‑100 (MQ=255)

                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                    >  1:1236701/1‑100 (MQ=255)

                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                    >  1:1338504/1‑100 (MQ=255)

                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                    >  2:1926213/1‑100 (MQ=255)

                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                    >  1:2464992/1‑100 (MQ=255)

                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                    <  2:2096566/100‑1 (MQ=255)

                                               tGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACtt                                                    <  2:2096607/100‑1 (MQ=255)

                                                gAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCACTCGGCATTACCGTCATTACTTg                                                   <  1:1015979/100‑1 (MQ=255)

                                                    tttCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTc                                               >  1:1809433/1‑100 (MQ=255)

                                                    tttCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTc                                               >  1:2213174/1‑100 (MQ=255)

                                                    tttCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTc                                               <  2:2551887/100‑1 (MQ=255)

                                                     ttCAGGCAAGACAACATCATCGCTGCGTCAATCGGTATGCAGCGGACTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCa                                              >  1:1478300/1‑100 (MQ=255)

                                                     cttccgatctAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTc                                               <  2:806877/90‑1 (MQ=255)

                                                      tCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAg                                             >  1:1476378/1‑100 (MQ=255)

                                                      tCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTGTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGttt                                                <  1:78996/97‑1 (MQ=255)

                                                       taaaaagagtgaggagATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAgg                                            >  2:2567835‑M1/17‑100 (MQ=255)

                                                        aGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGc                                           <  2:2022975/100‑1 (MQ=255)

                                                         ggCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCa                                          <  2:2893002/100‑1 (MQ=255)

                                                          gCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTTCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCACGc                                           <  1:136199/98‑1 (MQ=255)

                                                           cAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATg                                        <  2:2387923/100‑1 (MQ=255)

                                                           cAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATg                                        >  2:2331433/1‑100 (MQ=255)

                                                           cAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACGCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATg                                        <  2:1032713/100‑1 (MQ=255)

                                                               gtgaggagatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTATTTCTTTTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGccc                                     >  1:1990126‑M2/37‑99 (MQ=255)

                                                               aaaaCGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAgatcggaaga                                    >  1:806874/1‑91 (MQ=255)

                                                               aaaaCGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCg                                    <  2:47828/100‑1 (MQ=255)

                                                               aaaaCGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCg                                    <  1:2832764/100‑1 (MQ=255)

                                                                 gaggagatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAg                                  >  2:2739994‑M2/35‑100 (MQ=255)

                                                                  aCGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGt                                 >  1:2033946/1‑100 (MQ=255)

                                                                   ggagatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg                                >  1:1867808‑M2/33‑100 (MQ=255)

                                                                   cGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTg                                >  2:2001495/1‑100 (MQ=255)

                                                                     agatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGc                              >  1:1784588‑M2/31‑100 (MQ=255)

                                                                      gatcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCa                             >  2:1998620‑M2/30‑100 (MQ=255)

                                                                      cATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCa                             >  1:2448223/1‑100 (MQ=255)

                                                                        tcgctgcataccgatttacgcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTTATTACTTGTTTCAGGCATGCCCGCGTGGCAAg                           >  1:871979‑M2/28‑100 (MQ=255)

                                                                         CGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGt                          >  2:1734237‑M1/1‑100 (MQ=255)

                                                                            TGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCa                       >  1:1390640‑M1/1‑100 (MQ=255)

                                                                            TGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCa                       <  1:253867‑M1/100‑1 (MQ=255)

                                                                            TGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCa                       >  1:2655898‑M1/1‑100 (MQ=255)

                                                                             GCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCa                       >  2:842588‑M1/1‑99 (MQ=255)

                                                                              CGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATa                     <  1:2000397‑M1/100‑1 (MQ=255)

                                                                               gTAAATCGGTATGAAGCGGTCTACTGACGCTTTTTAATTATACTCATTCGGCATTACCGTCATTACTTGTGTCAGGGCTGACCGAATGTCAATTGAATa                     >  1:2387194/1‑99 (MQ=255)

                                                                                 aaaTCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAAcc                  <  1:1029403/100‑1 (MQ=255)

                                                                                   aTCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTTATTCGGCATTACCGCCATTATTTGTTTCCGGCATTCCCGAGTGGCAAGTGCATATCCCg                >  1:2127513/1‑100 (MQ=255)

                                                                                   aTCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAAc                   <  1:1204180/97‑1 (MQ=255)

                                                                                   aTCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCg                >  1:2400726/1‑100 (MQ=255)

                                                                                           gcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTTTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACaa        >  1:1709279‑M2/9‑100 (MQ=255)

                                                                                           gcagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACaa        >  2:1931722‑M2/9‑100 (MQ=255)

                                                                                            cagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACaaa       >  1:340347‑M2/8‑100 (MQ=255)

                                                                                            cagcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACaaa       >  2:212504‑M2/8‑100 (MQ=255)

                                                                                             agcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAAc      <  1:2789057‑M2/94‑1 (MQ=255)

                                                                                             agcgatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAAc      <  1:2254554‑M2/94‑1 (MQ=255)

                                                                                                gatCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACAtc   <  2:2818467‑M2/97‑1 (MQ=255)

                                                                                                 atCTCCTCACTCTTTTCAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACAtct  <  1:1704966‑M2/98‑1 (MQ=255)

                                                                                                  tCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACAtc   <  1:1116863‑M2/97‑1 (MQ=255)

TCAGGAGTGCGCAAAATGATGCGACAATCACTTCAGGCTGTTTTACCTGAAATTTCAGGCAATAAAACGTCATCGCTGCGTAAATCGGTATGCAGCGATCTCCTCACTCTTTTTAATTCTCCTCATTCGGCATTACCGTCATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCT  >  NC_000913/4556978‑4557174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.