New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4601057 =104 (1.000)8 (0.080) 5/168 NT 7.5% coding (461/540 nt) dnaT DNA biosynthesis protein (primosomal protein I)
?NC_000913 4601089 = 98 (1.000)coding (429/540 nt) dnaT DNA biosynthesis protein (primosomal protein I)
Rejected: Frequency below cutoff threshold.

Only 100 of 147 total aligned reads displayed.

CCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAGCG  >  NC_000913/4600991‑4601186
                                                                                                  |                                                                                                 
gcctcattcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtt                                                                                                  >  1:2057845‑M1/67‑100 (MQ=255)
 cTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGttt                                                                                                 >  1:476503/1‑100 (MQ=255)
 cTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGttt                                                                                                 >  2:162258/1‑100 (MQ=255)
  tggtggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGtttt                                                                                                <  1:1153560/100‑1 (MQ=255)
    cattcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttg                                                                                              >  2:1362287‑M1/63‑100 (MQ=255)
    cattcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttg                                                                                              >  1:1790426‑M1/63‑100 (MQ=255)
     tggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGttttttt                                                                                             >  1:2690844/1‑98 (MQ=255)
     tggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgt                                                                                             <  1:2330851/100‑1 (MQ=255)
     tggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgt                                                                                             <  1:2355826/100‑1 (MQ=255)
     attcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGATTttgt                                                                                             >  1:304056‑M1/62‑100 (MQ=255)
      ggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgtt                                                                                            >  2:1673336/1‑100 (MQ=255)
      ggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgtt                                                                                            <  1:2782271/100‑1 (MQ=255)
      ggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgtt                                                                                            <  2:688946/100‑1 (MQ=255)
      ggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgtt                                                                                            <  2:295751/100‑1 (MQ=255)
      ggAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgtt                                                                                            <  1:2408345/100‑1 (MQ=255)
       tcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaactggcgcgcatcctgcaaatcggtcgtgccagTTTttgtt                                                                                            >  2:2697580‑M2/92‑99 (MQ=255)
       tcattgcctactggcaggcggaaggtaaagtctttcaccatgtgcagtggcaacaaaaaCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTttgttg                                                                                           >  1:793669‑M1/60‑100 (MQ=255)
          tttGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCa                                                                                        >  2:1900505/1‑100 (MQ=255)
           ttGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCAc                                                                                       <  2:379737/100‑1 (MQ=255)
               cTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGca                                                                                   >  1:2601621/1‑100 (MQ=255)
               cTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGca                                                                                   >  2:1323529/1‑100 (MQ=255)
                   cAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATg                                                                               <  2:573848/100‑1 (MQ=255)
                    aGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATgg                                                                              <  1:617329/100‑1 (MQ=255)
                    aGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCACTTTTTGTCGCCACTGCACATg                                                                               <  1:2169297/99‑1 (MQ=255)
                     ggTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                                                             <  2:2159618/100‑1 (MQ=255)
                     ggTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                                                             >  2:1600789/1‑100 (MQ=255)
                     ggTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                                                             <  1:1985019/100‑1 (MQ=255)
                      gtgcGCTGACGGGATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGt                                                                             <  1:1147329/96‑1 (MQ=255)
                      gTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTg                                                                            <  1:1200520/100‑1 (MQ=255)
                      gTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTg                                                                            <  2:259424/100‑1 (MQ=255)
                      gTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGAACGACCGATTTGCAGGCTGCGCACCAGTTTTTGTTGCCACTGCACATGGTg                                                                            >  1:1332408/1‑100 (MQ=255)
                        tCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGaa                                                                          <  1:794544/100‑1 (MQ=255)
                        tCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGaa                                                                          <  2:2331235/100‑1 (MQ=255)
                         cGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTTTTTCTATTTCACATGGTGaa                                                                          >  1:301201/1‑99 (MQ=255)
                             gACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACt                                                                     >  1:2084834/1‑100 (MQ=255)
                              aCCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACtt                                                                    <  2:1187760/100‑1 (MQ=255)
                               ccGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACttt                                                                   >  2:2288395/1‑100 (MQ=255)
                               ccGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACttt                                                                   >  2:2648955/1‑100 (MQ=255)
                               ccGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACctt                                                                   >  2:1323151/1‑100 (MQ=255)
                                cGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTa                                                                  <  2:1392526/100‑1 (MQ=255)
                                cGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTa                                                                  >  2:1097401/1‑100 (MQ=255)
                                 gTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTAc                                                                 <  1:2367848/100‑1 (MQ=255)
                                   aTTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCt                                                               >  1:1490937/1‑100 (MQ=255)
                                      cacaTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTcc                                                            >  1:2329043/1‑100 (MQ=255)
                                        caTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGc                                                          >  1:2111639/1‑100 (MQ=255)
                                         aTCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGcc                                                         <  2:1474744/100‑1 (MQ=255)
                                           ctcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTg                                                       <  2:1730316/100‑1 (MQ=255)
                                            tcGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGcc                                                         <  1:1902599/97‑1 (MQ=255)
                                             cGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGcc                                                     <  2:2382716/100‑1 (MQ=255)
                                             cGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGcc                                                     <  2:2647487/100‑1 (MQ=255)
                                             cGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGcc                                                     <  2:897793/100‑1 (MQ=255)
                                             cGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGcc                                                     <  1:2060594/100‑1 (MQ=255)
                                             cGTTCCGGCAGTCCGCCGTTGCTGGCACGACCTGTTTGCAGGCTGCGCGCCAGTCTTTGTTGCCCCTGCACATGGTGAAAGACTTTTCCTCTcgcccgcc                                                     <  1:168297/100‑1 (MQ=255)
                                                  cGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                                                <  2:2817208/100‑1 (MQ=255)
                                                  cGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAg                                                >  1:1977047/1‑100 (MQ=255)
                                                    gCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGc                                              <  1:745910/100‑1 (MQ=255)
                                                     cAGTCCGCCGTTGCTTGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCa                                             <  1:2540140/100‑1 (MQ=255)
                                                         ccgccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatga                                         >  2:1370212/1‑100 (MQ=255)
                                                          cgccgTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaa                                        >  2:210487/1‑100 (MQ=255)
                                                          aacaaaaaCTGGCACGACCGATTTGCAGGATGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatga                                         >  2:2697580‑M1/9‑99 (MQ=255)
                                                           acaaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaat                                       >  2:135004‑M2/40‑100 (MQ=255)
                                                           acaaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaat                                       >  2:1664913‑M2/40‑100 (MQ=255)
                                                            caaaaactggcgcgcagcctgcaaatcggtcgtgccagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCaatgaatg                                      >  1:1790426‑M2/39‑100 (MQ=255)
                                                              gTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAg                                    <  1:1413164/100‑1 (MQ=255)
                                                              gTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAg                                    >  1:1515420/1‑100 (MQ=255)
                                                              gTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAg                                    <  1:99902/100‑1 (MQ=255)
                                                                tGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGc                                  <  2:2456707/100‑1 (MQ=255)
                                                                  cTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTTTTTTTTTTTCACATGGAGAAAGACTTTACATTCCGTCTTCCAGTAAGCAATGAATGAGGc                                  >  1:1423210/1‑98 (MQ=255)
                                                                  CTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCa                                <  2:451227‑M1/100‑1 (MQ=255)
                                                                    GGCACGACCGATTTGCGGGCTGCCCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTGTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                              >  1:2724234‑M1/1‑100 (MQ=255)
                                                                    GGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                              >  1:2625687‑M1/1‑100 (MQ=255)
                                                                    GGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                              <  2:205339‑M1/100‑1 (MQ=255)
                                                                    GGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                              <  2:2122562‑M1/100‑1 (MQ=255)
                                                                    GGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                              <  2:1715476‑M1/100‑1 (MQ=255)
                                                                    GGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGt                              <  2:1016854‑M1/100‑1 (MQ=255)
                                                                     gctccaCCGATTTGCTGTCTGCGCGCCAGTTTTGGTTGCCACTGGACATTGTGTAAGATTTTACCTTACGCCTGCCAGTAGGCAATGAATGAGGCCAGt                              <  1:676142/94‑1 (MQ=255)
                                                                     GCACGACCGATTTGCAGGCTGCGCGCCAGCTTTTGTTGCCACTGCACATGGTGAAAGACTAGACCTTCCGCCTGCCAGTAGGCAATGAATGAGGTCAg                               <  1:1865462‑M1/98‑1 (MQ=255)
                                                                      CACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTc                            >  2:2430018‑M1/1‑100 (MQ=255)
                                                                      CACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTc                            <  2:720900‑M1/100‑1 (MQ=255)
                                                                        cGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGttctt                          >  2:146474/1‑100 (MQ=255)
                                                                         gACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGttcttc                         <  1:205338/100‑1 (MQ=255)
                                                                         gACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGttcttc                         <  2:1516810/100‑1 (MQ=255)
                                                                          aCCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCg                        >  2:188959/1‑100 (MQ=255)
                                                                          aCCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCg                        >  2:188490/1‑100 (MQ=255)
                                                                           ccGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCgg                       >  1:2887482/1‑100 (MQ=255)
                                                                            cGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggt                      <  2:1032892/100‑1 (MQ=255)
                                                                            cGATGTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGCCTTGACCTTCCGCCTTCCAGTAGGCAATGAAGGATGCCAGTTCTTCg                        <  1:2004467/98‑1 (MQ=255)
                                                                             gATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggtg                     >  1:2834494/1‑100 (MQ=255)
                                                                              aTTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCggtgg                    <  2:1515426/100‑1 (MQ=255)
                                                                                ttGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTc                  <  2:2485356/100‑1 (MQ=255)
                                                                                          cgcgcCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGctctc        >  2:532955/1‑100 (MQ=255)
                                                                                           gcgcCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGctctct       <  2:1713622/100‑1 (MQ=255)
                                                                                            cgcCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCtt      >  1:1681323/1‑100 (MQ=255)
                                                                                            cgcCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCtt      <  2:531068/100‑1 (MQ=255)
                                                                                            cgcCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCtt      <  1:307360/100‑1 (MQ=255)
                                                                                            cgcCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCtt      <  2:1139477/100‑1 (MQ=255)
                                                                                              ccagTTTTTGTTGCCACTGCACATGGTCAAAGGCTTTACCTTCCGCCTGCCAGTAGGCCATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAg    <  1:1367308‑M2/96‑1 (MQ=255)
                                                                                               cagTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAgc   <  2:2837930‑M2/97‑1 (MQ=255)
                                                                                                agTTTTTGTTGCCACTGCTCATGGTGCAAGACTTTTCCTTACGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAgcg  <  2:2001724‑M2/98‑1 (MQ=255)
                                                                                                agTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAgcg  >  2:291030‑M2/3‑100 (MQ=255)
                                                                                                  |                                                                                                 
CCTGGTGGAATTTGGCTGTCAGGTTCGCTGACCGTATTCACATCTCGTTTCGGCAGTCCGCCGTTGCTGGCACGACCGATTTGCAGGCTGCGCGCCAGTTTTTGTTGCCACTGCACATGGTGAAAGACTTTACCTTCCGCCTGCCAGTAGGCAATGAATGAGGCCAGTTCTTCGGTGGTCACCGGCTCTCTTAGCG  >  NC_000913/4600991‑4601186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.