BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_000913	3,815,859	Δ82 bp	100%		[rph]–[rph]	[rph], [rph]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3815859	3815940	82	123 [0]	[2] 122	[rph]–[rph]	[rph], [rph]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3815858	0 (0.000)	100 (1.090)	63/158	NT	100%	pseudogene (24/48 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH
*	?	NC_000913	3815941 =	0 (0.000)	100 (1.090)	63/158	NT	100%	pseudogene (609/669 nt)	rph	ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH

Only 100 of 122 total aligned reads displayed.

CCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCG  >  NC_000913/3815842‑3816038

tggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcc                                                                                                   >  2:2289197‑M2/100‑100 (MQ=255)

 ggtttcatggcttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcc                                                                                                   <  1:785900‑M2/1‑1 (MQ=255)

 gatctcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCg                                                                                                  <  2:432375‑M2/2‑1 (MQ=255)

      catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgccgagatc                                                                                             >  1:432373‑M2/94‑95 (MQ=255)

      catgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTcccc                                                                                             <  2:1864097‑M2/7‑1 (MQ=255)

       atgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCt                                                                                            >  1:2695996‑M2/93‑100 (MQ=255)

       atgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCt                                                                                            >  2:2595091‑M2/93‑100 (MQ=255)

        tgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCt                                                                                            >  1:686257‑M2/92‑99 (MQ=255)

        tgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTg                                                                                           >  2:1611595‑M2/92‑100 (MQ=255)

        tgccttcgctcctcatcttacttttctaaagaaaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTg                                                                                           <  1:2834394‑M2/9‑1 (MQ=255)

         gccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGc                                                                                          <  2:611116‑M2/10‑1 (MQ=255)

          ccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcggtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                         >  2:2912343‑M2/90‑100 (MQ=255)

          ccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcggtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                         >  2:2913516‑M2/90‑100 (MQ=255)

          ccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                         >  2:949251‑M2/90‑100 (MQ=255)

          ccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCa                                                                                         >  2:1250724‑M2/90‑100 (MQ=255)

           cttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCTTCCCCTGCAc                                                                                        >  1:2435933‑M2/89‑100 (MQ=255)

           cttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCAc                                                                                        >  2:410562‑M2/89‑100 (MQ=255)

             tcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACtt                                                                                      >  1:69319‑M2/87‑100 (MQ=255)

              cgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTc                                                                                     >  1:872563‑M2/86‑100 (MQ=255)

                ctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCaa                                                                                   <  2:139993‑M2/17‑1 (MQ=255)

                  cctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatg                                                                                 >  2:2261446‑M2/82‑100 (MQ=255)

                      atcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgc                                                                             >  2:1861114‑M2/78‑100 (MQ=255)

                         ttacttttctacagacaaaaaacaggcgactcatcaggcgccttaaatatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGcc                                                                          <  1:1965616‑M2/26‑1 (MQ=255)

                          tacttttctacagacaaaaaaaaggcgactcataagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGcc                                                                          >  1:190775‑M2/74‑99 (MQ=255)

                           acttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCg                                                                        >  2:541012‑M2/73‑100 (MQ=255)

                             ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTc                                                                      >  2:1591240‑M2/71‑100 (MQ=255)

                                 ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTc                                                                   <  2:132434‑M2/33‑1 (MQ=255)

                                 ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                  >  2:448978‑M2/67‑100 (MQ=255)

                                 ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                  <  1:963573‑M2/34‑1 (MQ=255)

                                 ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCg                                                                  >  2:2067234‑M2/67‑100 (MQ=255)

                                  tacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCgg                                                                 >  1:118653‑M2/66‑100 (MQ=255)

                                   acagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCgg                                                                 <  2:1343938‑M2/35‑1 (MQ=255)

                                   acagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGt                                                                <  1:1820701‑M2/36‑1 (MQ=255)

                                   acaaacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGt                                                                <  1:2444171‑M2/36‑1 (MQ=255)

                                     agacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtca                                                              >  2:604564‑M2/63‑100 (MQ=255)

                                      gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcat                                                             >  2:44307‑M2/62‑100 (MQ=255)

                                      gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcat                                                             >  2:2446586‑M2/62‑100 (MQ=255)

                                      gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtc                                                               <  1:1076508‑M2/37‑1 (MQ=255)

                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcggtctgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCggtcagc                                                            <  1:844309‑M2/40‑3 (MQ=255)

                                       acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatc                                                            <  1:1361033‑M2/40‑1 (MQ=255)

                                        caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                           >  2:2475304‑M2/60‑100 (MQ=255)

                                        caaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtcatca                                                           >  2:1573117‑M2/60‑100 (MQ=255)

                                         aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCAc                                                          >  1:937774‑M2/59‑100 (MQ=255)

                                          aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCAc                                                          >  1:721880‑M2/58‑99 (MQ=255)

                                          aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACt                                                         >  1:1200761‑M2/58‑100 (MQ=255)

                                          aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACt                                                         >  1:745096‑M2/58‑100 (MQ=255)

                                           aaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTa                                                        >  2:587204‑M2/57‑100 (MQ=255)

                                            tttaaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTAc                                                       >  1:869817‑M2/56‑100 (MQ=255)

                                               aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCCCTTCATTGATGCGCCCGTCTTCGGTCATCACTACGtt                                                    >  1:1963197‑M2/53‑100 (MQ=255)

                                               aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt                                                    >  1:1035362‑M2/53‑100 (MQ=255)

                                               aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt                                                    >  2:547279‑M2/53‑100 (MQ=255)

                                               aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt                                                    >  2:1900302‑M2/53‑100 (MQ=255)

                                               aaggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt                                                    >  2:67263‑M2/53‑100 (MQ=255)

                                               aaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCTATGATGCGCCCGTCTTCGGTCATCACTACGtt                                                    <  2:2767354‑M2/48‑1 (MQ=255)

                                                 ggcgactcatcagtcgccttaaaaatcagtttgccagcgccgcgttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCa                                                  <  1:1865541‑M2/50‑1 (MQ=255)

                                                 ggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCACTGCTGCGCCCGTCTTCGGTCATCACTACGTTCa                                                  <  1:1913683‑M2/50‑1 (MQ=255)

                                                   cgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATg                                                <  2:2545614‑M2/52‑1 (MQ=255)

                                                       tcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCgg                                            <  2:289743‑M2/56‑1 (MQ=255)

                                                       tcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCgg                                            <  1:1003947‑M2/56‑1 (MQ=255)

                                                        catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                           >  2:1124279‑M2/44‑100 (MQ=255)

                                                        catcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGt                                           >  2:767422‑M2/44‑100 (MQ=255)

                                                             gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                      >  2:2782011‑M2/39‑100 (MQ=255)

                                                             gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTg                                      >  1:302170‑M2/39‑100 (MQ=255)

                                                              tcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGc                                     <  2:2696012‑M2/63‑1 (MQ=255)

                                                                gccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCgg                                   >  1:2739444‑M2/36‑100 (MQ=255)

                                                                gccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCgg                                   <  2:1551246‑M2/65‑1 (MQ=255)

                                                                 ccttaaaaatcggtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGc                                  <  1:296090‑M2/66‑1 (MQ=255)

                                                                   ttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCag                                <  2:2886326‑M2/68‑1 (MQ=255)

                                                                     aaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCagag                              <  2:1037523‑M2/70‑1 (MQ=255)

                                                                     aaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTACGGTCATCACTACGTTCATGTCGGTCTCTGCGGCagag                              <  1:1798387‑M2/70‑1 (MQ=255)

                                                                     aaaaatcagtttgccagcgccgccttctccCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCagag                              <  1:1735920‑M2/70‑1 (MQ=255)

                                                                      aaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGt                             >  2:2824057‑M2/30‑100 (MQ=255)

                                                                       aaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTc                            <  1:58753‑M2/72‑1 (MQ=255)

                                                                        aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCt                           >  1:292782‑M2/28‑100 (MQ=255)

                                                                        aatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCt                           <  1:1272424‑M2/73‑1 (MQ=255)

                                                                            agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa                       <  1:2197108‑M2/77‑1 (MQ=255)

                                                                             gttttccagcgccgccttctgcCGTCCCCTTCACTTCCATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAAc                      >  1:2090720‑M2/23‑100 (MQ=255)

                                                                             gtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa                       <  2:1093101‑M2/77‑1 (MQ=255)

                                                                              tttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACg                     <  2:109455‑M2/79‑1 (MQ=255)

                                                                                tgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTa                   >  1:2484826‑M2/20‑100 (MQ=255)

                                                                                 gccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAt                  <  1:977527‑M2/82‑1 (MQ=255)

                                                                                  ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAtt                 >  1:965902‑M2/18‑100 (MQ=255)

                                                                                  ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAtt                 >  1:1971255‑M2/18‑100 (MQ=255)

                                                                                  ccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTAtt                 >  1:1106909‑M2/18‑100 (MQ=255)

                                                                                   cagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTc                >  2:1865447‑M2/17‑100 (MQ=255)

                                                                                    agcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTcc               <  2:1136546‑M2/85‑1 (MQ=255)

                                                                                    agcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTcc               <  2:1395884‑M2/85‑1 (MQ=255)

                                                                                     gcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCa              >  1:730559‑M2/15‑100 (MQ=255)

                                                                                        ccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt           <  2:2907119‑M2/89‑1 (MQ=255)

                                                                                        ccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGAt           >  2:736458‑M2/12‑100 (MQ=255)

                                                                                         cgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATc          <  1:1281366‑M2/90‑1 (MQ=255)

                                                                                            cttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa       >  2:2765910‑M2/8‑100 (MQ=255)

                                                                                            cttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCa       <  1:2724396‑M2/93‑1 (MQ=255)

                                                                                            cTTCTGCCGTCCCCTGCACTTCAAAGATGCTCCCGTCTTCGGTCATCACTACGTTCATGACGGTCTCTGCGGCAGAGTCTTGAACGTCTTTCAGATCg         >  1:1768900/1‑98 (MQ=255)

                                                                                             ttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaa      >  2:2165447‑M2/7‑100 (MQ=255)

                                                                                              tctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCaaa     <  1:2658460‑M2/95‑1 (MQ=255)

                                                                                               ctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAc    <  1:2304320‑M2/96‑1 (MQ=255)

                                                                                               ctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAc    >  1:1328991‑M2/5‑100 (MQ=255)

                                                                                                tgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAcc   <  1:2462696‑M2/97‑1 (MQ=255)

                                                                                                tgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAAcc   >  2:1727734‑M2/4‑100 (MQ=255)

CCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCG  >  NC_000913/3815842‑3816038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`