Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,079,004 G→C 15.4% intergenic (+73/+28) yoeF → / ← yeeX pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related/UPF0265 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,079,0040GC15.4% 283.2 / 42.9 111intergenic (+73/+28)yoeF/yeeXpseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related/UPF0265 family protein
Reads supporting (aligned to +/- strand):  ref base G (48/45);  new base C (9/8);  total (57/54)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01

Only 100 of 115 total aligned reads displayed.

TGCATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTGGA  >  NC_000913/2078906‑2079103
                                                                                                  |                                                                                                   
tgcATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCgg                                                                                                    <  1:2320593/100‑1 (MQ=255)
tgcATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCgg                                                                                                    >  1:1620358/1‑100 (MQ=255)
  gctgcagcggaagGCTGTTGGCAAGTGCGATGGGCTTGCTTATGATGATGATGACGTTGATACAGAGATAAGAATCAATGAGCAATGAGGGTTGCCggg                                                                                                   <  1:2778252/90‑1 (MQ=255)
  cATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGc                                                                                                  >  2:2473003/1‑100 (MQ=255)
      cAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAcc                                                                                              <  2:641472/100‑1 (MQ=255)
      cAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAcc                                                                                              <  2:428995/100‑1 (MQ=255)
      cAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAcc                                                                                              >  1:659394/1‑100 (MQ=255)
      cAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAcc                                                                                              >  1:2640070/1‑100 (MQ=255)
       agaagaAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAccc                                                                                             >  1:2082996/1‑100 (MQ=255)
       agaagaAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAAccc                                                                                             <  2:1718404/100‑1 (MQ=255)
       agaagaAGGCTGTTGTTAATTTATATTGGTTCTAGGATGAGAATGATGACGGTGCTAAACAAATAAGCATCAATGAGCAATGAGTGTTGCCGGGCAAct                                                                                              <  1:248436/99‑2 (MQ=255)
        gaagaaGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCt                                                                                            >  1:487543/1‑100 (MQ=255)
        gaagaaGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCt                                                                                            >  2:1227564/1‑100 (MQ=255)
         aggaagGCTGTTGTTAATTTCGATTGGTTCTCGTATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTc                                                                                           <  1:1601244/98‑1 (MQ=255)
         aagaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTc                                                                                           <  2:1759769/100‑1 (MQ=255)
          agaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCa                                                                                          <  2:1807139/100‑1 (MQ=255)
           gaagGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCAt                                                                                         >  2:1079562/1‑100 (MQ=255)
            aagGCTGTTGTTAATGTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCAtt                                                                                        <  2:1111823/100‑1 (MQ=255)
             agGCTGTTGTTAATTTCGATGCGTTCTCGGATGAAAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGTAACCCTCAt                                                                                         <  1:947301/98‑1 (MQ=255)
              ggCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCATTgn                                                                                      <  2:2840163/100‑2 (MQ=255)
               gCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGaa                                                                                     <  2:1102465/100‑1 (MQ=255)
                 tgttgtTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATa                                                                                   <  2:2536769/100‑1 (MQ=255)
                 tgttgtTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCCGGCAACCCTCATTgctca                                                                                   <  1:974272/100‑5 (MQ=255)
                     gttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAAc                                                                               <  2:2288315/100‑1 (MQ=255)
                     gttAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAAc                                                                               >  2:1017163/1‑100 (MQ=255)
                       tAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATaaa                                                                                 >  1:2473200/1‑96 (MQ=255)
                        aaTTTCGATTTGTTCTCGGATGAGAATGATGACGGTGTTACAGAGATCAGAATCGATGAGCAATGAGATTTGCCGAGCATCCATCATTGAAt                                                                                    <  1:1967365/92‑1 (MQ=255)
                         aTTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGa                                                                           <  1:640849/100‑1 (MQ=255)
                          tttCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGaa                                                                          >  1:1166104/1‑100 (MQ=255)
                            tCGATTGGTTCTCGGATGAGAATGATGATGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAAtt                                                                        <  2:2308320/100‑1 (MQ=255)
                            tCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAAtt                                                                        <  2:135019/100‑1 (MQ=255)
                             cGATTGGTTCTCGGATGAGGATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAAt                                                                         >  2:1303682/1‑98 (MQ=255)
                              gATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTAc                                                                      >  2:232640/1‑100 (MQ=255)
                                 tGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtc                                                                   <  2:1578511/100‑1 (MQ=255)
                                 tGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtc                                                                   <  2:2241654/100‑1 (MQ=255)
                                 tGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtc                                                                   >  1:1009620/1‑100 (MQ=255)
                                   gTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcgc                                                                 >  1:1020073/1‑100 (MQ=255)
                                    ttCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcgct                                                                >  2:1744709/1‑100 (MQ=255)
                                        cGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTActtcgcttcg                                                             <  1:1949911/99‑1 (MQ=255)
                                            tGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtt                                                        >  2:785263/1‑100 (MQ=255)
                                            tGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtt                                                        >  2:285260/1‑100 (MQ=255)
                                              agaATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtttt                                                      <  2:867815/100‑1 (MQ=255)
                                              agaATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGtttt                                                      <  1:2880195/100‑1 (MQ=255)
                                                actgatgaCGGTGATACACAGCTAACAATCAATGAGCAATGAGGGTTGCCTGGCAACCCTCATTGAATAAAACGAGAATTACTTCGCTTCGCCGttt                                                       <  1:1222227/95‑1 (MQ=255)
                                                 atgatgACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCa                                                   <  1:1029903/100‑1 (MQ=255)
                                                 atgatgACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTGTc                                                    >  1:262864/1‑99 (MQ=255)
                                                  tgatgaCGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTc                                                    <  2:2211345/98‑1 (MQ=255)
                                                     tgaCGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTc                                               >  1:2134555/1‑100 (MQ=255)
                                                      gaCGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTc                                               <  2:2730492/99‑1 (MQ=255)
                                                       agggTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCAt                                                  <  1:876427/93‑1 (MQ=255)
                                                        cGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGcc                                            <  1:2463984/100‑1 (MQ=255)
                                                        cGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGcc                                            >  2:1043521/1‑100 (MQ=255)
                                                        cGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGcc                                            <  2:1257183/100‑1 (MQ=255)
                                                         ggTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGccc                                           <  1:1762663/100‑1 (MQ=255)
                                                              tACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGc                                      >  2:1885598/1‑100 (MQ=255)
                                                              tACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGc                                      >  2:1430457/1‑100 (MQ=255)
                                                                cacaGATAAGAATCAATGAGCAATGAGGGTTGCCGGTCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCtt                                    >  2:2058210/1‑100 (MQ=255)
                                                                cacaGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCtt                                    >  2:1095125/1‑100 (MQ=255)
                                                                cacaGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCtt                                    >  2:1385635/1‑100 (MQ=255)
                                                                  caGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTc                                  >  2:2582187/1‑100 (MQ=255)
                                                                   aGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCATCCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCa                                 <  1:1556195/100‑1 (MQ=255)
                                                                    gATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGCATAACACGGGAATTACTTCGCTCCGCCGACTATTACTTCTCCCATAGcctcca                                 >  1:2030821/1‑94 (MQ=255)
                                                                    gATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAg                                >  2:231832/1‑100 (MQ=255)
                                                                    gATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAg                                <  1:2864922/100‑1 (MQ=255)
                                                                     aTAAGAATAAATGAACAATGAGGGTTCCCGGGCAACCCTCATGTAATAAAACGGAAATTACTTCGCGTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGc                               <  1:1295078/100‑1 (MQ=255)
                                                                      tAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCt                              >  1:2272105/1‑100 (MQ=255)
                                                                       aaGAATTAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGGTTTTCATTTCGCCCATAGCTTTCAGCtt                             <  1:1350517/100‑1 (MQ=255)
                                                                         gAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCtttt                           <  2:2065147/100‑1 (MQ=255)
                                                                           cgttttattcaatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCAATAGCTTTCAGCttttt                          >  1:2355803/10‑99 (MQ=37)
                                                                           ccgatctagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTg                         <  2:124642/93‑1 (MQ=255)
                                                                           aTCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTg                         >  2:805502/1‑100 (MQ=255)
                                                                           aTCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTg                         <  2:1741844/100‑1 (MQ=255)
                                                                            tcaatgatcaatgaGGGTTTCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTgg                        <  1:1303677/100‑1 (MQ=255)
                                                                             caatgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGga                       >  1:1538359/1‑100 (MQ=255)
                                                                                tgagcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGCTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGat                    >  1:1963916/1‑100 (MQ=255)
                                                                                  ttcaatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGatat                  >  1:2793111/3‑100 (MQ=255)
                                                                                  agcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTgagatcgg                  >  1:124641/1‑93 (MQ=255)
                                                                                  agcaatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGatat                  >  2:264785/1‑100 (MQ=255)
                                                                                    caatgagTGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcg                >  2:1530081/1‑100 (MQ=255)
                                                                                    caatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcg                <  1:285259/100‑1 (MQ=255)
                                                                                    caatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcg                >  2:2328355/1‑100 (MQ=255)
                                                                                     aatgagGGTTGCCGGGCAACCCTCATTGAATAAAACGTGCATTACTTCGCTTCGCCGTTTTTCTTTTCCCCCATAGCTTTCAACTTTTTgg                        >  1:2636055/1‑91 (MQ=255)
                                                                                     aatgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgc               >  1:1218278/1‑100 (MQ=255)
                                                                                      atgagGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgcg              >  2:1877651/1‑100 (MQ=255)
                                                                                      atgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgcg              >  2:2705512/1‑100 (MQ=255)
                                                                                      atgagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTATTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATcgcg              >  1:2039746/1‑100 (MQ=255)
                                                                                        gagGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcggc            >  2:1514618/1‑100 (MQ=255)
                                                                                         agGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcggcg           <  1:2751689/100‑1 (MQ=255)
                                                                                         agGGTTGCCCGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCgcggcg           >  2:185289/1‑100 (MQ=255)
                                                                                           ggTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGtt         >  2:1447491/1‑100 (MQ=255)
                                                                                               gCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTTATTTTTTCTTTAGCTTTCAGCTTTTTGGAGATATCGTGTCGTTCttt     >  1:188497/1‑100 (MQ=255)
                                                                                               gCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCttt     >  2:2022172/1‑100 (MQ=255)
                                                                                               gCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCttt     <  2:2025756/100‑1 (MQ=255)
                                                                                               gCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCttt     >  2:1493812/1‑100 (MQ=255)
                                                                                               gCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCttt     >  1:92635/1‑100 (MQ=255)
                                                                                                 cGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTgg   <  1:2632846/100‑1 (MQ=255)
                                                                                                 cGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTgg   <  1:661795/100‑1 (MQ=255)
                                                                                                 cGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTgg   <  2:2083009/100‑1 (MQ=255)
                                                                                                 cGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTgg   >  1:1649178/1‑100 (MQ=255)
                                                                                                  gggCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTGga  <  2:1166109/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
TGCATACAGAAGAAGGCTGTTGTTAATTTCGATTGGTTCTCGGATGAGAATGATGACGGTGATACACAGATAAGAATCAATGAGCAATGAGGGTTGCCGGGCAACCCTCATTGAATAAAACGGGAATTACTTCGCTTCGCCGTTTTTCATTTCGCCCATAGCTTTCAGCTTTTTGGAGATATCGCGGCGTTCTTTGGA  >  NC_000913/2078906‑2079103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: