| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,736,911 | C→T | 15.1% | intergenic (+28/‑243) | bamD → / → raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,736,911 | 0 | C | T | 15.1% | 284.2 / 35.6 | 118 | intergenic (+28/‑243) | bamD/raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| Reads supporting (aligned to +/- strand): ref base C (43/57); new base T (14/4); total (57/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.37e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.54e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
GTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAA > NC_000913/2736813‑2737009 | gTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGccc > 2:2355364/1‑100 (MQ=255)gTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGccc > 2:2213193/1‑100 (MQ=255)gTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGccc < 2:25275/100‑1 (MQ=255) cagatgcagatgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCtt > 2:557194/1‑100 (MQ=255) tgcagatgAATGCGCACGCTGAGAAAGTAGCGAAAATCATCGCCGAAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTTAGc < 1:1995204/100‑1 (MQ=255) tgcagatgAATGCGCAAGCGGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGc < 2:2564948/100‑1 (MQ=255) cagatgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTg > 1:2253412/1‑100 (MQ=255) agatgAATGCGCTAGCTGAAAAAGTCGCAAAAATCATCTCCTCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGTCAGCCCTTTAGCTGc < 1:475030/100‑1 (MQ=255) gatgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGcc < 1:1036222/100‑1 (MQ=255) tgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGt > 1:1306309/1‑100 (MQ=255) tgAATGCGCAAGCTGAAAAAGTAGCGAAAATCATAGCCGCAAACAGCAGCAATAAATAACAAAAACCTGAAAAACAAAACGGCAGCCCTTGAGCTGc > 1:2080710/1‑97 (MQ=255) aTGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGtttt < 2:741597/100‑1 (MQ=255) gcgcAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCTCAAGGGCTGCCGttttgt < 2:2740103/100‑3 (MQ=38) gcgcAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCTCAAGGGCTGCCGttttgt < 2:1616435/100‑3 (MQ=38) gcgcAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGtttttt < 2:1052799/100‑1 (MQ=255) cgcAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGttttttt < 1:2868364/100‑1 (MQ=255) cAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAATACAAAACGGCAGCCCTTGAGCTGCCGttttttt < 1:1990895/98‑1 (MQ=255) aGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTc > 1:209615/1‑100 (MQ=255) aGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTc > 2:2479920/1‑100 (MQ=255) gCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACAAAAAACGGCAGCTCAAGGGCTGCCGttttgtgtttca < 2:189584/100‑9 (MQ=21) gAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTc < 2:2896656/100‑1 (MQ=255) aaaaaGTAGCGAAACTCAGCGCCGCAAACAGCAGCAATACATCACAGTAACCTGAAACACACAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCa < 1:2693355/100‑1 (MQ=255) aaaaaGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAGACCTGAAACCCAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTc < 2:2467526/99‑1 (MQ=255) aGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTtg < 1:2643688/100‑1 (MQ=255) gTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTtgt < 1:196288/100‑1 (MQ=255) gTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTtgt < 1:624377/100‑1 (MQ=255) gTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTtgt > 2:1002378/1‑100 (MQ=255) tAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTtgtg < 1:575543/100‑1 (MQ=255) aGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGa < 1:2115550/100‑1 (MQ=255) aGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGa < 2:2304350/100‑1 (MQ=255) aGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGa > 2:613329/1‑100 (MQ=255) gCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGaa > 1:1127946/1‑100 (MQ=255) gCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGaa < 2:111862/100‑1 (MQ=255) gAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAAc < 2:1685648/100‑1 (MQ=255) aaaaTCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACt < 2:602062/100‑1 (MQ=255) aaTCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGa < 1:832732/100‑1 (MQ=255) aaTCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGa < 1:829595/100‑1 (MQ=255) tcatcGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAg < 2:1759420/100‑1 (MQ=255) catcGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGc > 2:1109083/1‑100 (MQ=255) atggccgaAAACAGCAGAAATACAAAACAGAAAACTGAAAAAAAAAACGGCAGCCCTTGAGCTGCCGATTATTTATTCTGACAGTTGGGAAACTGa > 1:573140/4‑96 (MQ=255) atccgcgcAAACAGCAGCAATACATAACTGAAACCTGAAACACAAAACGTCAGCCCTTGAGCTGTCGTGTTTTTATTCTGTCAGTTGTGAAACTGAAg < 1:567030/93‑1 (MQ=255) tcGCCGCAAACAGCAGCAATACATAACAGAAACCTGACACACACAACGGCAGCCATTGAGCTGCTGTTTTTTTATTCTGTACGTTGTGAAACTGAAg > 2:2910530/1‑97 (MQ=255) tcGCCGCAAACAGCAGCAATACATAACAGAAACATGAAACACAAACCGGCAGCCCTTGAGATGCCGTTTTTTTATTCTGTCAGTTGTGCAACTGAAGCGa > 2:2910523/1‑100 (MQ=255) gccgcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGAtt > 2:2141659/1‑100 (MQ=255) gccgcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGAtt > 1:234200/1‑100 (MQ=255) ccgcAATCAGCCGCAATACTTAACAGTACCCTGAAACACAAAGCGGCAGCCCTTGAGCTGACGTTTTTTTATTCTGTCAGTTGGGAAACTGAAGCGAttt < 1:1017661/100‑1 (MQ=255) ccgcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGAttt < 1:1885712/100‑1 (MQ=255) cgcCAACAGCAGCAATACATAACAGAACCCTGAAACACACAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTa < 1:2163801/100‑1 (MQ=255) cgcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGAttt < 1:1016793/99‑1 (MQ=255) gcAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAg > 2:1948404/1‑100 (MQ=255) aaaCAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTc < 1:2791732/100‑1 (MQ=255) cagcagCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCt > 1:2331727/1‑100 (MQ=255) agcaATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCg > 2:2148578/1‑100 (MQ=255) naTACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGAtc > 1:1624819/2‑100 (MQ=255) aaTACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGAtc < 2:2842135/100‑1 (MQ=255) aaTACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGAtc < 2:2303345/100‑1 (MQ=255) aTACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGAtct > 2:2286381/1‑100 (MQ=255) tACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGAtctc < 2:2778119/100‑1 (MQ=255) ataTAACAGAAACCTGAAACACAAAACCGCAGCCCTTGAGCTACCGTTTTTTTATTCTTTCATTTGTGAAACTGAAGCGATTTAGTCGCTATCGAtct < 1:2436984/96‑1 (MQ=255) cATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtcat > 1:1653474/1‑100 (MQ=255) aTAACAGAAACCTGAAACACAAAACGTCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtcatc < 1:1109732/100‑1 (MQ=255) tAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtcatca > 2:2086154/1‑100 (MQ=255) tAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtcatca > 2:1705751/1‑100 (MQ=255) tAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCtcatca < 2:930063/100‑1 (MQ=255) aCAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTAAAGCGATTTAGTCGCTATCGATCTCATCaaa > 1:2059150/1‑100 (MQ=255) cAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGACACTGAAGCGATTTAGTCGCTATCGATCTCATCAAat > 1:813126/1‑100 (MQ=255) aGAAACCTGAAACACAAAACGGCAGCTCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAata < 1:2907258/100‑1 (MQ=255) aaaCCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATg < 2:1996634/100‑1 (MQ=255) aaaCCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATg < 2:234201/100‑1 (MQ=255) aaCCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATgg > 2:2165279/1‑100 (MQ=255) aCCTGAAACACAAAACGGCAGCCCTTGCGCTGCCGTTTTTTTATTCTGTCAGTTGTCAAACTCAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGc < 1:1245121/100‑1 (MQ=255) ccTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCt > 1:244077/1‑100 (MQ=255) cagaataaaaaaaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTc > 2:1057299/10‑100 (MQ=25) gAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCgn < 2:1624825/100‑2 (MQ=255) aataaaaaaaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCt > 2:158085/7‑100 (MQ=25) aaaCACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCt > 2:2531098/1‑100 (MQ=255) ntaaaaggaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCtt > 1:701763/9‑100 (MQ=38) ataaaaaaaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCtt > 2:550311/6‑100 (MQ=37) ataaaaaaaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCtt > 2:2699632/6‑100 (MQ=37) aaCACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCtt < 2:764707/100‑1 (MQ=255) aaCACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCtt > 1:2666933/1‑100 (MQ=255) taaaaaaaCGGCAGCTCAAGGGCTGCCGTTATTTTATTCTGTCAGTTGTGAAACTGACGCGATTTAGTCGCTATCGATCTCCCCAAATAGGGCTCGCtt > 1:139363/5‑99 (MQ=25) cacaAAACGGCAGCCCTTGAGCGGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTg < 1:2349980/100‑1 (MQ=255) aaaaaaaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAGGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTg > 1:1028884/4‑100 (MQ=37) acacAACGGCCGCCATTGAGCTGCCGTGTTTTTATTCTGGCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGCTCTCATCAAATATGCCTCGCtttaa < 1:1986201/100‑3 (MQ=255) aaaaaaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTga > 1:2392839/3‑100 (MQ=38) caAATCGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTATCAGTTGTGAAACTGAACCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTga < 1:1444679/99‑1 (MQ=255) caAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTgag < 1:1125308/100‑1 (MQ=255) aaaaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTgaga > 2:2424560/1‑100 (MQ=38) aaaaCGGCAGCCCTTGAGCGGCCGTTTTTTGATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTgaga < 1:1026082/100‑1 (MQ=255) aaCGGCAGCTCAAGGGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGata > 2:845005/1‑100 (MQ=39) aaCGGCAGCCCTTGAGCTGCCGTTGTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTGGTCGCTATCGATCTCATAAAATATGACTCGCTTTGAGata > 1:2548378/1‑100 (MQ=255) cGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATAtt < 2:244078/100‑1 (MQ=255) gCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTcc < 2:2752660/100‑1 (MQ=255) gCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCa < 1:1678739/100‑1 (MQ=255) gCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCa > 2:1491792/1‑100 (MQ=255) gCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTGGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCa > 1:1919702/1‑100 (MQ=255) cccTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTTCTCaa > 1:2699955/1‑100 (MQ=255) cccTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCaa > 2:2034276/1‑100 (MQ=255) cccTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCaa > 2:2466226/1‑100 (MQ=255) | GTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAACAGAAACCTGAAACACAAAACGGCAGCCCTTGAGCTGCCGTTTTTTTATTCTGTCAGTTGTGAAACTGAAGCGATTTAGTCGCTATCGATCTCATCAAATATGGCTCGCTTTGAGATATTCCTCAA > NC_000913/2736813‑2737009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |