Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,407,295 T→A 17.4% intergenic (+29/‑80) accC → / → yhdT acetyl‑CoA carboxylase, biotin carboxylase subunit/DUF997 family putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,407,2950TA17.4% 328.0 / 54.6 136intergenic (+29/‑80)accC/yhdTacetyl‑CoA carboxylase, biotin carboxylase subunit/DUF997 family putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base T (66/46);  new base A (16/8);  total (82/54)
Fisher's exact test for biased strand distribution p-value = 6.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01

Only 100 of 141 total aligned reads displayed.

ACGAGAACTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGTTTTGTTCA  >  NC_000913/3407196‑3407394
                                                                                                   |                                                                                                   
aCGAGAACTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGAttt                                                                                                     >  2:1420460/1‑100 (MQ=255)
    gaACTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAAGACAAATAACACTGCTAAAGCGTCAAAAGGCCGGATTTTCCg                                                                                                 >  1:2046811/1‑100 (MQ=255)
       cTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGcc                                                                                              >  2:1021633/1‑100 (MQ=255)
       cTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGcc                                                                                              <  1:822194/100‑1 (MQ=255)
         tCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCtt                                                                                            <  2:2847640/100‑1 (MQ=255)
         tCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGAAAATCCGGCCtt                                                                                            <  1:810489/100‑1 (MQ=255)
          ccAGCATGGTGGCACTAACATCCACTATCTGGATAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCttt                                                                                           >  1:1925901/1‑100 (MQ=255)
          ccAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGAAAATCCGGCCttt                                                                                           <  2:1181680/100‑1 (MQ=255)
           cAGCATGGTGGGACTAACATCCATTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGc                                                                                               <  1:522221/95‑1 (MQ=255)
            aGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTTGTTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCttt                                                                                           <  2:829380/98‑1 (MQ=255)
            aGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGAAAATCCGGCCttttg                                                                                         <  2:1651582/100‑2 (MQ=39)
             gCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCtttttt                                                                                        <  1:1178888/100‑1 (MQ=255)
              cATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTtta                                                                                       <  2:2526517/100‑1 (MQ=255)
               aTGGTGGCACTAACATCCACTATCTGGGGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGAAAATCCGGCCttttgac                                                                                       <  1:398178/99‑4 (MQ=38)
               aTGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTttat                                                                                      <  1:920569/100‑1 (MQ=255)
               aTGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTttat                                                                                      <  2:2373857/100‑1 (MQ=255)
               aTGGTGGAACTAAAATCCACTATTTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGAAAATCCGGCCttttgacg                                                                                      <  1:449703/100‑5 (MQ=37)
                 ggtggCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTttatta                                                                                    >  2:1832034/1‑100 (MQ=255)
                  gtggCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTAc                                                                                   >  1:16465/1‑100 (MQ=255)
                  gtggAACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTttatta                                                                                    <  1:1993962/99‑1 (MQ=255)
                    ggCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTg                                                                                 <  2:1771528/100‑1 (MQ=255)
                      cACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTggg                                                                               <  2:456654/100‑1 (MQ=255)
                      cACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTggg                                                                               >  2:1811422/1‑100 (MQ=255)
                      cACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTggg                                                                               >  2:1677963/1‑100 (MQ=255)
                      cACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTggg                                                                               >  1:2278114/1‑100 (MQ=255)
                         tAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGAt                                                                            >  1:1026624/1‑100 (MQ=255)
                          aaCATCCACTATGTGGAGAAAAAACTCGGTCGTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGGCGGCTTTTCCGGCCTTTTTTATTACTGGGGATc                                                                           <  1:437834/100‑1 (MQ=255)
                            cATCCACTATCTGGAGAAAAAAGTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGa                                                                         >  1:1570020/1‑100 (MQ=255)
                                  cTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAAccc                                                                   <  1:1550246/100‑1 (MQ=255)
                                    aTCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAAccccc                                                                 <  2:124575/100‑1 (MQ=255)
                                      cTGGAGAGAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCAt                                                               >  2:1532485/1‑100 (MQ=255)
                                       tGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATa                                                              >  1:410527/1‑100 (MQ=255)
                                        ggAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATaa                                                             >  2:1127119/1‑100 (MQ=255)
                                         gagaAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAg                                                            >  2:895868/1‑100 (MQ=255)
                                          agaAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATaaag                                                           >  1:1677055/1‑98 (MQ=255)
                                          agaAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAgg                                                           >  2:138976/1‑100 (MQ=255)
                                          agaAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAgg                                                           <  2:1044884/100‑1 (MQ=255)
                                           gaAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGGCTTTTTTATTAGTGGGGATAGACAAACACCATAAg                                                            >  2:131206/1‑98 (MQ=255)
                                           gaAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGt                                                          >  2:596238/1‑100 (MQ=255)
                                             aaaaaCTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTAc                                                        >  2:1691330/1‑100 (MQ=255)
                                             aaaaaCTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTAc                                                        >  2:853656/1‑100 (MQ=255)
                                             aaaaaCTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTAc                                                        <  2:617157/100‑1 (MQ=255)
                                                aaCTCGGTCTTCAGGAAAAAGAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAAt                                                     <  1:1625965/100‑1 (MQ=255)
                                                 aCTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTTTTTTTTTTGTTCGACAACCCCCATAAGGTACAAt                                                     >  1:1432108/1‑99 (MQ=255)
                                                  cTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATcc                                                   <  1:2812930/100‑1 (MQ=255)
                                                   tCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATccc                                                  <  2:2615745/100‑1 (MQ=255)
                                                     ggTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCg                                                <  1:1070318/100‑1 (MQ=255)
                                                     ggTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCg                                                >  2:2494583/1‑100 (MQ=255)
                                                       tCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGGTCGACAACCCCCATAAGGTACAATCCCCGCt                                              <  2:46491/100‑1 (MQ=255)
                                                       tCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCt                                              <  2:1613680/100‑1 (MQ=255)
                                                         ttCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCtt                                             <  1:910805/99‑1 (MQ=255)
                                                           cAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTttct                                          <  2:424544/100‑1 (MQ=255)
                                                            aGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTTCTGGGGATCGCCAAACCCCATAAGGTACAATTCCAGCTttctt                                         >  1:2336745/1‑100 (MQ=255)
                                                            aGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTttctt                                         >  2:2782166/1‑100 (MQ=255)
                                                             ggAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTttcttc                                        >  2:2230097/1‑100 (MQ=255)
                                                             ggAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTttcttc                                        >  1:2338599/1‑100 (MQ=255)
                                                             ggAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTttcttc                                        >  1:2514655/1‑100 (MQ=255)
                                                              gAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCa                                       >  2:2118468/1‑100 (MQ=255)
                                                                  aaTAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCAcaaa                                   >  2:2431146/1‑97 (MQ=255)
                                                                  aaTAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCa                                   >  2:2232180/1‑100 (MQ=255)
                                                                      aGACTGCTAAAGCGTCAAAAGGCCTGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAg                               <  2:1311656/100‑1 (MQ=255)
                                                                         cTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGa                            >  1:288975/1‑100 (MQ=255)
                                                                         cTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGa                            <  2:2143178/100‑1 (MQ=255)
                                                                         cTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGa                            >  1:1787106/1‑100 (MQ=255)
                                                                          tGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGa                            >  1:1616417/1‑99 (MQ=255)
                                                                             tAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACaaa                        >  2:281073/1‑100 (MQ=255)
                                                                              aaaGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTAATGGGGATCGACAACCCCCATAAGGTCCAATCTCCGCTTTCTTCACCCATCAGGGACaaaa                       >  1:1030058/1‑100 (MQ=255)
                                                                               aaGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACaaaaa                      <  2:507837/100‑1 (MQ=255)
                                                                               aaGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACaaaaa                      >  1:2808780/1‑100 (MQ=255)
                                                                                 gCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAAt                    >  2:1945131/1‑100 (MQ=255)
                                                                                 aataaaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCAGAAGGTACAATACCCGCTTTCTTCACCCACCAGGGACGAAAAAt                    >  1:501246/6‑100 (MQ=25)
                                                                                  ataaaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATg                   >  1:236647/5‑100 (MQ=38)
                                                                                  ataaaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATg                   >  2:2397331/5‑100 (MQ=38)
                                                                                   taaaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATgg                  >  1:2637637/4‑100 (MQ=38)
                                                                                   gTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATgg                  <  2:882856/100‑1 (MQ=255)
                                                                                    tCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGa                 >  2:952272/1‑100 (MQ=255)
                                                                                    tCAAAAGGCCGGATTTCCCGGCAGTTTTTACTACAGGGGATCGACAACCCCCATAAGTTACAATCCCCGCTTTCTTCACCCATCAAAAACAAAAAATgg                  <  1:654554/99‑1 (MQ=255)
                                                                                    aaaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATgg                  >  1:446491/3‑99 (MQ=39)
                                                                                    aaaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTCGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACaaacactg                   >  1:815350/3‑93 (MQ=38)
                                                                                     cAAAAGGCCTGATTTTCCGGCCTTTTGTATTAATGGGGATCGACAACCCCCATAAGATACAATACCCGATTTCTTCACCCATCAGGGACAAAAAATGGac                <  1:677371/100‑1 (MQ=255)
                                                                                     aaaaaGGCCGGAAGATGCGGGCTTTTTGCTTACGGGAGATGGACAACACCCATAAGGTACAGTGAAGGCTTACGTGAACGATCAGGGACAAAAAAt                    >  1:1799690/2‑96 (MQ=255)
                                                                                     aaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGac                >  1:2158688/2‑100 (MQ=39)
                                                                                     aaaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGac                >  1:249553/2‑100 (MQ=39)
                                                                                      aaaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGaca               >  2:939351/1‑100 (MQ=255)
                                                                                       aaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAACAAATGGacac              >  1:1415544/1‑100 (MQ=255)
                                                                                       aaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGacac              >  1:909410/1‑100 (MQ=255)
                                                                                       aaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGacac              >  1:1681453/1‑100 (MQ=255)
                                                                                       aaaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGacac              >  2:1096683/1‑100 (MQ=255)
                                                                                        aaGGCCGGAAAATCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACt             >  2:562908/1‑100 (MQ=255)
                                                                                          ggCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCg           >  1:1865542/1‑100 (MQ=255)
                                                                                          ggCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCg           >  1:122339/1‑100 (MQ=255)
                                                                                           gCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGt          >  2:275226/1‑100 (MQ=255)
                                                                                           gCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGt          >  2:818208/1‑100 (MQ=255)
                                                                                            ccGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGtt         <  1:2127863/100‑1 (MQ=255)
                                                                                            ccGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGtt         >  1:1897685/1‑100 (MQ=255)
                                                                                             cGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGttt        <  1:2651667/100‑1 (MQ=255)
                                                                                               gATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGTTTTg      <  2:2343367/100‑1 (MQ=255)
                                                                                                aTTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGCTACAATCCCCGCTTTCTTCACCCATCAGGGACAACAAATGGACACTCGTTTTGt     <  1:131205/100‑1 (MQ=255)
                                                                                                   ttCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGTTTTGTTCa  <  2:12583/100‑1 (MQ=255)
                                                                                                   ttCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGTTTTGTTCa  <  2:480287/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACGAGAACTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAAGACTGCTAAAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCTTCACCCATCAGGGACAAAAAATGGACACTCGTTTTGTTCA  >  NC_000913/3407196‑3407394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: