| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,377,792 | A→T | 18.4% | intergenic (‑70/+19) | blc ← / ← ampC | outer membrane lipoprotein cell division and growth lipocalin/penicillin‑binding protein; beta‑lactamase, intrinsically weak |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,377,792 | 0 | A | T | 18.4% | 313.7 / 64.5 | 136 | intergenic (‑70/+19) | blc/ampC | outer membrane lipoprotein cell division and growth lipocalin/penicillin‑binding protein; beta‑lactamase, intrinsically weak |
| Reads supporting (aligned to +/- strand): ref base A (61/50); new base T (9/16); total (70/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.56e-01 | |||||||||||
Only 100 of 140 total aligned reads displayed.
CGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCA > NC_000913/4377693‑4377887 | cGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGaaaa > 2:1786629/1‑100 (MQ=255) gCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAAt > 1:1486016/1‑100 (MQ=255) tGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTc > 2:2479199/1‑100 (MQ=255) tGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTc < 1:148588/100‑1 (MQ=255) cGGCAACGAGAGGGAGCATGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCgg > 1:1875745/1‑100 (MQ=255) cGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCgg < 1:2419168/100‑1 (MQ=255) ggCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGa > 2:1266111/1‑100 (MQ=255) gCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGAc < 2:737671/100‑1 (MQ=255) cAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcc < 2:518617/100‑1 (MQ=255) aCGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcctt < 2:455848/100‑3 (MQ=255) aCGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcctt < 1:360638/100‑3 (MQ=255) aCGAAAGGGAGCAGGGGCATAAATGATTCCTTACTGGTTTTTGTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAcctt < 1:1024237/100‑3 (MQ=255) cGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTTTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGAcc > 1:1575314/1‑97 (MQ=255) cGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGTAAGGAAAAGATGAGTAAAGGTCCGAAAATTCGGAcc > 1:1836040/1‑97 (MQ=255) cGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAccttt < 2:2648230/100‑4 (MQ=255) gagGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAccttttct < 2:688820/100‑7 (MQ=255) agGGCGCAGGCGCATAAATGTTTGCTTACTTGTTTTTTTCGAAGTGTAGATGACTGCCAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGTccttttct < 1:1133270/99‑7 (MQ=255) agGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTTTTTTTTTATATGACAACAAGGAAAAACGGAGTAAAAATGCGAAAAAGCGGACCCGAttg > 1:2919508/1‑97 (MQ=255) agGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTACGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAccttttct < 1:1862952/99‑7 (MQ=255) agGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAccttttctc < 2:2155726/100‑8 (MQ=255) gggAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAccttttctcc < 2:2128857/100‑9 (MQ=38) gggAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGaa > 2:2004854/1‑100 (MQ=255) ggAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAccttttctccg < 2:377831/100‑10 (MQ=38) ggAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAATTTTCGGAccttttctccg < 1:10786/100‑10 (MQ=38) aGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAAttt > 2:1631233/1‑100 (MQ=255) aGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTAc < 2:2664774/100‑1 (MQ=255) aGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTAc < 2:2304880/100‑1 (MQ=255) aGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTAc < 2:2737905/100‑1 (MQ=255) ggCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACt > 2:32609/1‑100 (MQ=255) ggCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACt > 2:1783467/1‑100 (MQ=255) ggCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGATCCGAAAATTCGGACCCGATGGAATTTTACt > 1:2465709/1‑100 (MQ=255) gcgcATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTg < 2:2311022/100‑1 (MQ=255) gcgcATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTg < 2:245052/100‑1 (MQ=255) cATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTa > 1:2150534/1‑99 (MQ=255) aaaTGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGc > 1:145854/1‑100 (MQ=255) aaaTGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGc < 2:1197291/100‑1 (MQ=255) aaaTGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGc < 1:544114/100‑1 (MQ=255) aaTGTTTCCTTACTGGTTTTTTTTTTTTTGTATATGACAGCAAGGAAAGTCGGAGAAATTGTTTTTAAATTGGGACCCGATGGAATTTTACTGTa > 1:1435101/1‑95 (MQ=255) aaTGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGcn < 2:809267/100‑2 (MQ=255) aaTGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCg > 2:1656954/1‑100 (MQ=255) aTGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGt < 2:1587454/100‑1 (MQ=255) aTGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGt > 2:1621377/1‑100 (MQ=255) gTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTa > 2:1766192/1‑100 (MQ=255) ttCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCTAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAg < 2:2050563/100‑1 (MQ=255) tCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGTGAAAAGGTCCGAAAATTCGGACCCTATGGATTTTTACTGTATAGCGTTaa > 1:537997/1‑98 (MQ=255) aCTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTg < 2:1857974/100‑1 (MQ=255) aCTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTg < 1:2167181/100‑1 (MQ=255) cTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGc > 1:833504/1‑100 (MQ=255) tGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAATGTCAGAAAAGTCGGACCCCGTGAGATGTTACTGTGGAGCGTTGAGAAGCtac > 1:2398576/1‑97 (MQ=255) tGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGcc > 1:2131154/1‑100 (MQ=255) ggTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCa > 2:215132/1‑100 (MQ=255) ggTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCa > 1:216673/1‑100 (MQ=255) tttttttCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAgg > 2:2840896/1‑100 (MQ=255) ttttttCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggc > 2:529330/1‑100 (MQ=255) tttttCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcg < 2:2012494/100‑1 (MQ=255) ttttCTAAGTGTAGATGACAGCGAGGGCCGTCTGATTAAAAAACAGAAAATTCGGACACGATGGAATTTTACTGTAGAGCGTTAAAAATTTGCCAgac > 1:17103/1‑96 (MQ=255) ttttCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcgg > 2:300943/1‑100 (MQ=255) ttttCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcgg < 1:1266106/100‑1 (MQ=255) ttttCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGAGGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAggcgg < 1:2880927/100‑1 (MQ=255) tCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGt > 2:432328/1‑100 (MQ=255) tAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAGTCTGACAGGCGGCGTCg > 2:2418213/1‑100 (MQ=255) tAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCg < 2:1704446/100‑1 (MQ=255) gtgtAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGAct > 2:218929/1‑100 (MQ=255) gtgtAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGAct < 1:525337/100‑1 (MQ=255) tgtAGATGACAGCAAAGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGTGCGTTAAGAATCTGCCAGGCGGCGTCGAct < 1:486711/99‑1 (MQ=255) gATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGc > 2:612637/1‑100 (MQ=255) aTGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCt < 2:2261689/100‑1 (MQ=255) aTGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCt > 1:640564/1‑100 (MQ=255) aTGACAGCAAGGAAAAGCGGAGAAAAGATCCGAAAATTCGGACCCGATGGAATTTTACCGTAGACCGTTAAGAATCTGCCAGGCGGCGTCGACTGTCACt > 1:414921/1‑100 (MQ=255) tGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTg < 1:2350651/100‑1 (MQ=255) gACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTgg < 2:2171991/100‑1 (MQ=255) cAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGa > 1:1331089/1‑99 (MQ=255) aGCAAGTAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTg < 1:2701871/96‑1 (MQ=255) gCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTg > 2:1336047/1‑100 (MQ=255) gCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTg < 2:1637205/100‑1 (MQ=255) cAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGTCTCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTgg < 2:2801404/100‑1 (MQ=255) cAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGTAATTTTACGGTAGAGCTTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTgg < 2:1619443/100‑1 (MQ=255) acgAAAAGCGTAGAAAATGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCTTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTgg < 1:11624/96‑1 (MQ=255) ggAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGAt < 1:1241830/100‑1 (MQ=255) ggAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGAt > 1:2341750/1‑100 (MQ=255) ggAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGAt > 2:1619171/1‑100 (MQ=255) gCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGtttt > 1:2269362/1‑100 (MQ=255) ggAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttg > 2:820919/1‑100 (MQ=255) ggAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttg > 1:976691/1‑100 (MQ=255) ggAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttg < 1:846600/100‑1 (MQ=255) gagaAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgt > 2:1507648/1‑100 (MQ=255) gagaAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgt > 2:1353623/1‑100 (MQ=255) catcgggTCCGAATTTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATCGTTtttggtt > 1:528197/6‑100 (MQ=255) catcgggTCCGAATTTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgttt > 1:2014575/6‑100 (MQ=255) catcgggTCCGAATTTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgttt > 2:1590970/6‑100 (MQ=255) atcgggTCCGAATTTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgtttg > 1:2289366/5‑100 (MQ=255) tcgggTCCGAATTTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGc > 1:708518/4‑100 (MQ=255) aaaGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTtttgttt > 1:987993/1‑98 (MQ=255) ggTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAg > 2:12244/1‑100 (MQ=255) ncgcaaaTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCCGCAt > 1:89/5‑100 (MQ=255) ccGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCAt > 1:1892356/1‑100 (MQ=255) ccGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCAt > 1:1070080/1‑100 (MQ=255) cGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATc > 1:350582/1‑100 (MQ=255) gAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTGTTGTTTGCCAGCAtaa > 1:2713382/1‑98 (MQ=255) aaaaTTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATc < 1:2793832/98‑1 (MQ=255) | CGCTGCGGCAACGAGAGGGAGCAGGCGCATAAATGTTTCCTTACTGGTTTTTTTCTAAGTGTAGATGACAGCAAGGAAAAGCGGAGAAAAGGTCCGAAAATTCGGACCCGATGGAATTTTACTGTAGAGCGTTAAGAATCTGCCAGGCGGCGTCGACTCTCGCTGGATTGGGATAGTTTTTGTTTGCCAGCATCA > NC_000913/4377693‑4377887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |