Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,573,528 A→G 100% pseudogene (1115/1503 nt) yjiT → pseudogene

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,573,5280AG100.0% 402.3 / NA 113pseudogene (1115/1503 nt)yjiTpseudogene
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (52/61);  total (52/61)

Only 100 of 114 total aligned reads displayed.

AAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGACAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGC  >  NC_000913/4573432‑4573622
                                                                                                 |                                                                                              
aaaGCGACGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTCGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAg                                                                                             <  1:1560492/100‑1 (MQ=255)
aaaGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAg                                                                                             <  1:2712538/100‑1 (MQ=255)
aaaGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAg                                                                                             <  1:2178121/100‑1 (MQ=255)
  aGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTg                                                                                           >  2:820923/1‑100 (MQ=255)
       aGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGCTGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAAtt                                                                                      >  2:344118/1‑100 (MQ=255)
        gTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTg                                                                                     >  1:729785/1‑100 (MQ=255)
        gTGAGATTTGGCAGGCAAAATCCAGCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTg                                                                                     <  1:337638/100‑1 (MQ=255)
        gTGAGATNTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGCGCGTTAAACTTGATGGCAGTGAAATTg                                                                                     >  1:203381/1‑100 (MQ=255)
         tGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGc                                                                                    >  2:1818295/1‑100 (MQ=255)
          gagaTTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGcc                                                                                   <  2:1909059/100‑1 (MQ=255)
           agaTTTGGCATGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCa                                                                                  <  1:1919867/100‑1 (MQ=255)
            gaTTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCTTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCAt                                                                                 >  2:1680066/1‑100 (MQ=255)
             aTTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCAtt                                                                                >  1:2409900/1‑100 (MQ=255)
                tGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGt                                                                             <  2:991868/100‑1 (MQ=255)
                 ggcaggcaAAATCCATCGGCAGGGTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTg                                                                            <  2:2728846/100‑1 (MQ=255)
                  gcaggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGGTCGTGCTGGAGGGATGATTGTT‑GTGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTg                                                                            <  1:2631207/99‑1 (MQ=255)
                  gcaggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGa                                                                           >  2:1077913/1‑100 (MQ=255)
                  gcaggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGa                                                                           >  2:2373111/1‑100 (MQ=255)
                   caggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAg                                                                          >  2:1575144/1‑100 (MQ=255)
                    aggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAgg                                                                         <  1:1041982/100‑1 (MQ=255)
                     ggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGt                                                                        >  2:1707720/1‑100 (MQ=255)
                     ggcaAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGt                                                                        >  1:423297/1‑100 (MQ=255)
                       caAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGc                                                                      <  2:32027/100‑1 (MQ=255)
                        aaaaTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGcc                                                                     >  1:2197785/1‑100 (MQ=255)
                        aaaaTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGcc                                                                     <  2:305307/100‑1 (MQ=255)
                         aaaTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCg                                                                    <  2:1539459/100‑1 (MQ=255)
                          aaTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGt                                                                   >  2:2334172/1‑100 (MQ=255)
                          aaTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGt                                                                   <  1:311917/100‑1 (MQ=255)
                           aTCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGtt                                                                  <  2:1480984/100‑1 (MQ=255)
                             ccATGGGTAGGTTTGTCGTTATTGGCGCGTGTTGGGGGGATG‑TTGTTGGGGAGCATTAACCTGGATGGCGGTGAAATTG‑CATTGGTGAGGTGCCGTTa                                                                 <  1:344117/98‑1 (MQ=255)
                             ccATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTaa                                                                >  1:2617390/1‑100 (MQ=255)
                             ccATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTaa                                                                >  1:16053/1‑100 (MQ=255)
                             ccATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTaa                                                                >  1:2234163/1‑100 (MQ=255)
                              cATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAAc                                                               <  1:337222/100‑1 (MQ=255)
                               aTCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAAcc                                                              <  1:1015790/100‑1 (MQ=255)
                                  ggCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTc                                                           >  2:7648/1‑100 (MQ=255)
                                  ggCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTc                                                           >  2:368098/1‑100 (MQ=255)
                                     aGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATc                                                        <  2:1643451/100‑1 (MQ=255)
                                     aGGTTTGTAGTTAGTGGCTCGTGCTGGAGGGAAGATTGTT‑GGGCGCAGTATACTTGATGGCCGTGAAATTGCCATGGGTGAGGTGCCGTTAACCTTCAt                                                         >  1:1695294/1‑99 (MQ=255)
                                       gTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGt                                                      >  1:1681989/1‑100 (MQ=255)
                                       gTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGt                                                      <  2:2338343/100‑1 (MQ=255)
                                        tttGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGtt                                                     <  1:1680059/100‑1 (MQ=255)
                                         ttGTCGTTAGTGGCTCGTGCTGGGGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTg                                                    <  1:2284674/100‑1 (MQ=255)
                                         ttGTCGTGAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCATTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTg                                                    <  1:1267252/100‑1 (MQ=255)
                                          tGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGa                                                   <  2:1830099/100‑1 (MQ=255)
                                          tGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGa                                                   <  1:2422197/100‑1 (MQ=255)
                                          tGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGa                                                   >  2:2652613/1‑100 (MQ=255)
                                           gTCGTTAGTGGCTCGTGCTGGAGGGATGATTTTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGTTGCCGTTAACCTTCATCGTTGAt                                                  >  1:1929960/1‑100 (MQ=255)
                                           gTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGa                                                   >  1:2423091/1‑99 (MQ=255)
                                             cGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGc                                                >  2:481501/1‑100 (MQ=255)
                                             cGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGc                                                <  2:1208155/100‑1 (MQ=255)
                                              gTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCa                                               >  1:2893643/1‑100 (MQ=255)
                                               ttAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAg                                              <  1:1457893/100‑1 (MQ=255)
                                                tAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGa                                             >  1:1723475/1‑100 (MQ=255)
                                                  gTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATc                                           <  2:192808/100‑1 (MQ=255)
                                                      cTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATg                                       <  1:2238277/100‑1 (MQ=255)
                                                      cTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGACATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATg                                       <  1:777950/100‑1 (MQ=255)
                                                       tCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATgg                                      <  1:983474/100‑1 (MQ=255)
                                                        cGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGc                                     <  2:920747/100‑1 (MQ=255)
                                                        cGTGCTCCAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCCGTGAAATTGCCATTGGTGAGGTGCCCTTAACCTTAATCGTTGCTGCAGATCaaag                                       >  1:2361244/1‑96 (MQ=255)
                                                         gTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCt                                    <  1:922026/100‑1 (MQ=255)
                                                          tGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTg                                   <  2:1422902/100‑1 (MQ=255)
                                                          tGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTg                                   <  1:2683720/100‑1 (MQ=255)
                                                          tGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTg                                   >  1:663742/1‑100 (MQ=255)
                                                           gCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGt                                  <  2:2245277/100‑1 (MQ=255)
                                                           gCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGt                                  <  2:2088210/100‑1 (MQ=255)
                                                            cTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGtt                                 <  2:445805/100‑1 (MQ=255)
                                                            cTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGtt                                 <  2:2589891/100‑1 (MQ=255)
                                                             tGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTa                                >  1:592446/1‑100 (MQ=255)
                                                              ggAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTAc                               <  1:1026008/100‑1 (MQ=255)
                                                              ggAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTAc                               <  2:663745/100‑1 (MQ=255)
                                                               gAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACa                              >  2:1023915/1‑100 (MQ=255)
                                                               gAGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACa                              >  2:534977/1‑100 (MQ=255)
                                                                aGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAg                             <  2:2103732/100‑1 (MQ=255)
                                                                aGGGATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAg                             >  2:1165956/1‑100 (MQ=255)
                                                                 gggATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAgg                            <  2:2721126/100‑1 (MQ=255)
                                                                 gggATGATTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAgg                            >  2:2449991/1‑100 (MQ=255)
                                                                   gatgatTGTT‑GGGTGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGa                          >  2:1981955/1‑100 (MQ=255)
                                                                     tgatTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACa                        >  2:2696885/1‑100 (MQ=255)
                                                                      gatTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAg                       >  2:374821/1‑100 (MQ=255)
                                                                       atTGTT‑GGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAgg                      >  1:326468/1‑100 (MQ=255)
                                                                        ttgtt‑gGGAGCATTAAACTTGATGGCAGTGAAATTGACATTGGTGAGGTGCCGTTAACCTTCATAGTTGATGCAGATAAATGGATGTTACAGGGACAGGc                     >  1:650666/1‑100 (MQ=255)
                                                                         tgtt‑gGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTTATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGct                    <  2:794284/100‑1 (MQ=255)
                                                                         tgtt‑gGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGct                    <  2:1168939/100‑1 (MQ=255)
                                                                          gtt‑gGGAGCATTAAACTTGATGGCAGTGAAATTGCCTTTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGctt                   >  1:1221574/1‑100 (MQ=255)
                                                                          gtt‑gGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGctt                   >  1:2825207/1‑100 (MQ=255)
                                                                            t‑gGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGcttct                 <  1:1325656/100‑1 (MQ=255)
                                                                            t‑gGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGcttct                 <  1:1326234/100‑1 (MQ=255)
                                                                            t‑gGGAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACATTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACCGGcttct                 >  1:1178315/1‑100 (MQ=255)
                                                                                gAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTg               <  1:725093/99‑1 (MQ=255)
                                                                                gAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGc              <  2:197877/100‑1 (MQ=255)
                                                                                gAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGc              <  2:33363/100‑1 (MQ=255)
                                                                                gAGCATTAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGc              <  1:2738831/100‑1 (MQ=255)
                                                                                     ttAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAgtgt         >  2:188866/1‑100 (MQ=255)
                                                                                      tAAACTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGtgtg        <  1:272497/100‑1 (MQ=255)
                                                                                       aaaCTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGc       <  1:2396893/100‑1 (MQ=255)
                                                                                       aaaCTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGc       <  1:752412/100‑1 (MQ=255)
                                                                                       aaaCTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGATAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGtgtg        >  1:234082/1‑99 (MQ=255)
                                                                                         aCTTGATGGCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGa     <  2:2139319/100‑1 (MQ=255)
                                                                                            tgatggCAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGAagc  <  1:953850/100‑1 (MQ=255)
                                                                                                 |                                                                                              
AAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTT‑GGGAGCATTAAACTTGATGACAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGC  >  NC_000913/4573432‑4573622

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑