| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 478,750 | C→T | 16.5% | intergenic (‑133/+31) | ylaB ← / ← ylaC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase/DUF1449 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 478,750 | 0 | C | T | 16.5% | 281.8 / 42.7 | 124 | intergenic (‑133/+31) | ylaB/ylaC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase/DUF1449 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (57/45); new base T (11/9); total (69/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.37e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
TATATCTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGA > NC_000913/478651‑478848 | gatatCTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGGATTTCATGAAGTTATGGG‑TGGAAACGATCATTGTCATTTGACCAGgcgc > 1:2768761/2‑100 (MQ=255) atatCTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCa < 2:2655533/100‑1 (MQ=255) atCTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCagn < 1:2407014/100‑2 (MQ=255) atCTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCaga > 2:2244242/1‑100 (MQ=255) cTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGc > 1:1268458/1‑100 (MQ=255) cTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGc < 2:260076/100‑1 (MQ=255) gATTGTGGAAAAAGGCTGGCTGGAGCTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCtt > 1:2368595/1‑100 (MQ=255) gATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCtt < 2:803703/100‑1 (MQ=255) gATTGTGAAAAAAGGCTGGCCGAAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAAAGACAAATGTCATTCGAACACACGCagag > 1:1141952/1‑97 (MQ=255) ttctgGAAAAATGTTGGCTGGGGTGGAAGAGGTAGAGCTGGTATTACCTTAAGTAATGGGCTGGAAA‑AATAATTGTCATTTGACCAGGCTGAGAGCTTTa < 1:1818007/97‑1 (MQ=255) gtgGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACg > 1:2714565/1‑100 (MQ=255) gtgGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACg > 1:1820555/1‑100 (MQ=255) gtgGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACg > 2:553945/1‑100 (MQ=255) tgGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGc < 1:553942/100‑1 (MQ=255) tgGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGc > 2:517406/1‑100 (MQ=255) ggAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGcc > 2:1741436/1‑100 (MQ=255) ggAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGcc > 1:2391189/1‑100 (MQ=255) gAAAAAGGCTGGCTGGAGATAAGGAGGGGGAGCTGGTGTTTCATGAAGTAATGGG‑AAGAAACGATCATAGTTATTTGACCAGGCGAAGAGCTTTACGCCt > 1:877725/1‑100 (MQ=255) aaagaGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACTATCATTGTCATTTGACCAGGCGCATAGCTTTACGCCTg < 1:1801747/100‑1 (MQ=255) aaaaGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTgg < 1:1292628/100‑1 (MQ=255) aaaGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGTAAAGCTCTGCGCCTGGt < 2:2222516/100‑1 (MQ=38) aaaGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGt > 1:2522324/1‑100 (MQ=255) aaaGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGt < 2:2522339/100‑1 (MQ=255) aaGGTTTGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGt < 1:873004/99‑1 (MQ=255) aaGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGTAAAGCTCTGCGCCTGGtc < 2:164933/100‑2 (MQ=38) aaGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTa < 2:2220290/100‑1 (MQ=255) aGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGTAAAGCTCTGCGCCTGGtca < 1:1234385/100‑3 (MQ=38) aGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTAt > 2:1342554/1‑100 (MQ=255) ggctggctGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGTAAAGCTCTGCGCCTGGtcaa < 2:1712979/100‑4 (MQ=38) gctggctgGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTTACCAGGCGTAAAGCTCTGCGCCTGGtcaaa < 1:1913926/100‑5 (MQ=37) tggctggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGTAAAGCTCTGCGCCTGGtcaaatg < 2:1718990/100‑7 (MQ=37) ggctggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTaa > 1:2253560/1‑99 (MQ=255) ggctggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAAc < 1:1610533/100‑1 (MQ=255) gctggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAAcc < 1:106454/100‑1 (MQ=255) gctggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAAcc > 2:2204370/1‑100 (MQ=255) ctggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAAccc > 1:1477357/1‑100 (MQ=255) ggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTa > 2:1087716/1‑100 (MQ=255) ggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTa > 1:1064091/1‑100 (MQ=255) ggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTa > 1:33167/1‑100 (MQ=255) agaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCGTTACGCCTGGTATGTAACCCTAAc < 1:2456383/100‑1 (MQ=255) tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTa < 1:2509328/100‑1 (MQ=255) aaGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTaa < 2:2695264/100‑1 (MQ=255) ggaggTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGa < 2:1935661/100‑1 (MQ=255) gTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGtt < 2:372215/100‑1 (MQ=255) gTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGtt < 2:1512195/100‑1 (MQ=255) tAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTg < 2:2911991/100‑1 (MQ=255) tAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTg > 1:1756862/1‑100 (MQ=255) agagCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGa < 1:2840523/100‑1 (MQ=255) cTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCg < 2:2689090/100‑1 (MQ=255) ggTATTTCATGAAGTGATGGG‑TGGCAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGgc > 1:105171/1‑100 (MQ=255) ggTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGgc > 2:1388287/1‑100 (MQ=255) ggTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGgc > 2:1386315/1‑100 (MQ=255) tATTTCATGAAGTGATGGG‑TGTAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGgcgc < 2:1094417/100‑1 (MQ=255) ttCATGAAGTGATGGG‑TGGAAACGATCATTGTCCTTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCgcgag > 1:1210496/1‑100 (MQ=255) ttCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCgcgag > 2:487558/1‑100 (MQ=255) tCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCgcgagc > 2:2103699/1‑100 (MQ=255) gAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg < 2:82484/100‑1 (MQ=255) gAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg > 2:2298456/1‑100 (MQ=255) aGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGt > 2:285502/1‑100 (MQ=255) aGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGt > 1:1658921/1‑100 (MQ=255) gTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTa > 1:1111128/1‑100 (MQ=255) gATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa > 1:2060274/1‑100 (MQ=255) aTGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaaa < 2:1821687/100‑1 (MQ=255) g‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAatat < 2:1544005/100‑1 (MQ=255) ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc > 2:1175295/1‑99 (MQ=255) ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCg > 2:2597603/1‑100 (MQ=255) aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa > 2:2786876/1‑100 (MQ=255) cGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaa > 1:405760/1‑100 (MQ=255) cGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaa > 1:1715004/1‑100 (MQ=255) aTCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAg > 1:663335/1‑100 (MQ=255) aTCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAg < 2:547494/100‑1 (MQ=255) aTCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAg < 1:1790257/100‑1 (MQ=255) tCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGa > 2:2916933/1‑100 (MQ=255) cATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGAc < 1:1386310/100‑1 (MQ=255) aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACa > 1:1512019/1‑100 (MQ=255) tGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACGTAAGAGGTGGATGCGGCGCGAGCGAGGGTGAAAATATGGTAGAAATACAGt > 2:2323073/1‑100 (MQ=255) ggggtacataCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGt > 2:701596/10‑100 (MQ=25) tCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTc < 1:789061/100‑1 (MQ=255) gttacataCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTc > 2:338508/8‑100 (MQ=25) aTTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCAc > 2:2890209/1‑100 (MQ=255) aTTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCAc > 1:1655214/1‑100 (MQ=255) aTTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCAc < 1:535672/100‑1 (MQ=255) ataCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCtt > 2:1310070/3‑100 (MQ=38) ataCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCtt > 2:779315/3‑100 (MQ=38) taCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCttt > 1:790851/2‑100 (MQ=38) taCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCttt > 2:2526989/2‑100 (MQ=38) aCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa > 2:81918/1‑100 (MQ=38) aCCAGGCGTAAAGCTCTGCGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa > 2:3852/1‑100 (MQ=38) aCCAGGCGTAAAGCTCTGCGCCTGGTATGTAAACCTAACTTAAGATGTTGATTCGGCGCGAGTGAGGGTAAAAATATCGTAAAAGGACAGTTCACCttt > 1:877412/1‑99 (MQ=38) aCCAGGCGCAGTGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGAAGCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCttt < 1:1615329/99‑1 (MQ=255) aCCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa < 2:212528/100‑1 (MQ=255) ccAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc < 1:1034698/100‑1 (MQ=255) cAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAACAATATCGTAAAAAGTCAGTTCACGTTTACg > 1:2053055/1‑100 (MQ=255) aGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACgg > 2:2504580/1‑100 (MQ=255) ggCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa < 2:1064095/100‑1 (MQ=255) ggCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa > 2:2398806/1‑100 (MQ=255) cgcAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACg < 1:2607997/100‑1 (MQ=255) cgcAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACg < 1:1283158/100‑1 (MQ=255) cgcAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACg < 2:610801/100‑1 (MQ=255) gcAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGa > 2:2772212/1‑100 (MQ=255) | TATATCTGATTGTGGAAAAAGGCTGGCTGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGG‑TGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGA > NC_000913/478651‑478848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |