Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 605,025 C→G 15.9% D134H (GAT→CAT)  nfsB ← dihydropteridine reductase, NAD(P)H‑dependent, oxygen‑insensitive

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913605,0250CG15.9% 302.8 / 48.7 113D134H (GAT→CAT) nfsBdihydropteridine reductase, NAD(P)H‑dependent, oxygen‑insensitive
Reads supporting (aligned to +/- strand):  ref base C (44/51);  new base G (8/10);  total (52/61)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.28e-01

Only 100 of 123 total aligned reads displayed.

ACCTTCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTCCTG  >  NC_000913/604927‑605124
                                                                                                  |                                                                                                   
 ccTTCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGcatcatcat                                                                                                   <  2:1086657/100‑1 (MQ=255)
  cTTCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCTAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATg                                                                                                  >  2:213664/1‑100 (MQ=255)
   ttCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGc                                                                                                 <  2:472355/100‑1 (MQ=255)
   ttCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGc                                                                                                 >  1:995127/1‑100 (MQ=255)
   ttCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGc                                                                                                 <  1:1648146/100‑1 (MQ=255)
    tCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCa                                                                                                <  2:1411909/100‑1 (MQ=255)
    tCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCa                                                                                                <  2:1390987/100‑1 (MQ=255)
     cGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAg                                                                                               >  1:756841/1‑100 (MQ=255)
      gATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGa                                                                                              >  1:1646803/1‑100 (MQ=255)
       aTGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGAt                                                                                             <  1:1063706/100‑1 (MQ=255)
        tGGGTACCGGGTCCAGACCCAGAGCCGCCGCGCCGATCAGGAAGTGAGCGATGTTGGGATAAACCTGTTTTGCCAGCCACTCTGCATGATGATGCAGagt                                                                                            <  1:651527/100‑3 (MQ=255)
        tGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATGATGATGCAGagt                                                                                            <  2:238348/100‑3 (MQ=255)
        tGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATGATGATGCAGagt                                                                                            <  1:2678929/100‑3 (MQ=255)
        tGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATGATGATGCAGagt                                                                                            <  1:2875512/100‑3 (MQ=255)
        tGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATGATGATGCAGagt                                                                                            <  2:1011353/100‑3 (MQ=255)
        tGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATGATGATGCAGagt                                                                                            <  2:1928374/100‑3 (MQ=255)
        tGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATc                                                                                            <  1:1194616/100‑1 (MQ=255)
        tGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATc                                                                                            <  2:1185621/100‑1 (MQ=255)
        tGGGTACCGCGTCAAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACATGTTTTGCCATCCACTCTGCACCATCATGCAGaac                                                                                            >  1:2438500/1‑98 (MQ=255)
        tGGGTACCGCGCCCAGACCCAGAGCCGCCACGCCGTGCAGGAAGTTACCTACGTTGAGATAAACCTGTTTTGCCATCCACGCTGCATGATGATGCAGagt                                                                                            <  1:1267706/100‑3 (MQ=255)
         gggTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATGATGATGCAGagtg                                                                                           <  1:2108340/100‑4 (MQ=255)
         gggTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCt                                                                                           <  1:149974/100‑1 (MQ=255)
         gggTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCt                                                                                           <  1:471698/100‑1 (MQ=255)
          ngTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCtt                                                                                          >  2:2108585/2‑100 (MQ=255)
          ggTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATGATGATGCAGagtgg                                                                                          <  2:2426573/100‑5 (MQ=255)
          ggTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCtt                                                                                          >  2:2057862/1‑100 (MQ=255)
              ccGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACg                                                                                      >  1:903213/1‑100 (MQ=255)
               ngcgTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACgg                                                                                     >  1:1345643/2‑100 (MQ=255)
                 cgTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTg                                                                                   <  2:1365537/100‑1 (MQ=255)
                 cgTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTg                                                                                   <  2:1150096/100‑1 (MQ=255)
                 cgTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTg                                                                                   <  2:1365456/100‑1 (MQ=255)
                  gTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCCGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGc                                                                                  <  1:1950472/100‑1 (MQ=255)
                       gACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTCGGGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATc                                                                             >  1:941430/1‑100 (MQ=255)
                         cccAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCa                                                                            >  1:1878496/1‑99 (MQ=255)
                           cAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCg                                                                         >  1:1021910/1‑100 (MQ=255)
                             gagCCGCCACCCCGAGCAGGAAGTTACCGACGTTGAGAGAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCgaa                                                                       <  1:2603087/100‑1 (MQ=255)
                              agCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCgaag                                                                      <  1:2232832/100‑1 (MQ=255)
                                ccgccACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCgaagaa                                                                    >  2:1473025/1‑100 (MQ=255)
                                ccgccACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCgaagaa                                                                    <  2:2676312/100‑1 (MQ=255)
                                    cACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTg                                                                <  2:2343484/100‑1 (MQ=255)
                                    cACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTg                                                                <  1:1010097/100‑1 (MQ=255)
                                     aCGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGc                                                               <  2:2593612/100‑1 (MQ=255)
                                      cGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCg                                                              <  2:2027929/100‑1 (MQ=255)
                                      cGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCg                                                              <  1:72430/100‑1 (MQ=255)
                                       gctgAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCg                                                              <  1:899749/96‑1 (MQ=255)
                                        ccGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCg                                                              <  1:1723072/98‑1 (MQ=255)
                                        ccGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGAc                                                            >  1:2672549/1‑100 (MQ=255)
                                         cGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGAcc                                                           <  1:814743/100‑1 (MQ=255)
                                         cGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGAcc                                                           >  1:2167576/1‑100 (MQ=255)
                                           aGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCtt                                                         <  1:2034409/100‑1 (MQ=255)
                                            gCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCttt                                                        >  1:1372448/1‑100 (MQ=255)
                                              aGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTAt                                                      <  2:1144144/100‑1 (MQ=255)
                                               ggAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATc                                                     >  2:1583808/1‑100 (MQ=255)
                                               ggAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATc                                                     >  2:1584211/1‑100 (MQ=255)
                                                 aaGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGt                                                   <  2:2751607/100‑1 (MQ=255)
                                                 aaGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGt                                                   >  1:1897887/1‑100 (MQ=255)
                                                     tACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTcgc                                               >  1:1140561/1‑100 (MQ=255)
                                                      aCCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTcgcg                                              <  2:1015204/100‑1 (MQ=255)
                                                        cGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGc                                            <  2:2078781/100‑1 (MQ=255)
                                                         gACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCt                                           >  1:1379609/1‑100 (MQ=255)
                                                         gACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCt                                           >  1:1322384/1‑100 (MQ=255)
                                                          aCGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCtt                                          >  1:2172204/1‑100 (MQ=255)
                                                           cGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCttt                                         <  2:2851462/100‑1 (MQ=255)
                                                            gTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTc                                        >  2:2097576/1‑100 (MQ=255)
                                                            gTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTc                                        <  2:394577/100‑1 (MQ=255)
                                                               gagaTAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCt                                     >  2:64170/1‑100 (MQ=255)
                                                               gagaTAAACCTGTTGTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCt                                     <  1:120317/100‑1 (MQ=255)
                                                                agaTAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTc                                        >  1:958842/1‑96 (MQ=255)
                                                                agaTAAACCTCTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTCTATCGTTCGCGGCTTTCGCtt                                    >  1:110097/1‑100 (MQ=255)
                                                                 gaTAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTc                                   <  1:2270714/100‑1 (MQ=255)
                                                                   tcaaCCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTCCGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTcc                                  <  2:860251/97‑1 (MQ=255)
                                                                   tAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCg                                 <  2:315694/100‑1 (MQ=255)
                                                                   tAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCg                                 >  1:85389/1‑100 (MQ=255)
                                                                   tAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCg                                 >  1:2150584/1‑100 (MQ=255)
                                                                      aCCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCACCGAAGAACTTGCAACCTTTATAGTTCGCGGCTTTCGCTTc                                   >  1:2454210/1‑95 (MQ=255)
                                                                        cTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTg                            <  2:1214907/100‑1 (MQ=255)
                                                                             ttGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCaaa                       >  1:1469496/1‑100 (MQ=255)
                                                                             ttGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTACCGTTCTCGCCTTTCGCTTCCGGCTTGGCaaa                       >  1:2060060/1‑100 (MQ=255)
                                                                              tGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAg                      >  2:1955835/1‑100 (MQ=255)
                                                                              accgtaaagatctGCATGATGATGCAGATCTTTAGGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAg                      >  2:2629938/11‑100 (MQ=37)
                                                                               gCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGc                     <  1:2029310/100‑1 (MQ=255)
                                                                                 gtaaagatctGCATGATGATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCgg                   >  2:2104509/8‑100 (MQ=255)
                                                                                 cATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCgg                   <  1:896905/100‑1 (MQ=255)
                                                                                   aaagatctGCATGATGATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGcc                 >  1:2021088/6‑100 (MQ=255)
                                                                                    ccACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCa                <  1:1233553/100‑1 (MQ=255)
                                                                                      gatctGCATGATGATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATc              >  2:2244527/3‑100 (MQ=255)
                                                                                      gatctGCATGATGATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATc              >  2:1336784/3‑100 (MQ=255)
                                                                                      gatctGCATGATGATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATc              >  2:2507434/3‑100 (MQ=255)
                                                                                       ctctGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCg             >  2:843001/1‑100 (MQ=255)
                                                                                          tGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCa          >  1:63513/1‑100 (MQ=255)
                                                                                           gCATGATGATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGACCATCGGCAt         >  1:2326215/1‑100 (MQ=255)
                                                                                           gCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCAt         >  2:473613/1‑100 (MQ=255)
                                                                                           gCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCAt         >  2:53339/1‑100 (MQ=255)
                                                                                            catcatcatGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATc        <  1:359286/100‑1 (MQ=255)
                                                                                               catcatGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTc     <  2:1546031/100‑1 (MQ=255)
                                                                                                atcatGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTcc    <  1:1304590/100‑1 (MQ=255)
                                                                                                atcatGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTcc    <  1:473610/100‑1 (MQ=255)
                                                                                                  catGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTCCTg  >  2:2668764/1‑100 (MQ=255)
                                                                                                  catGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTCCTg  <  2:2189727/100‑1 (MQ=255)
                                                                                                  catGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTCCTg  <  2:575353/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
ACCTTCGATGGGTACCGCGTCCAGACCCAGAGCCGCCACGCCGAGCAGGAAGTTACCGACGTTGAGATAAACCTGTTTTGCCATCCACTCTGCATCATCATGCAGATCTTTACGGTGCATATCAGCGAAGAACTTGCGACCTTTATCGTTCGCGGCTTTCGCTTCCGGCGTGGCAAAGCGGCCATCGGCATCTTCCTG  >  NC_000913/604927‑605124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: