| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 87,887 | C→T | 17.3% | intergenic (+39/‑141) | ilvH → / → cra | acetolactate synthase 3, small subunit, valine‑sensitive/transcriptional repressor‑activator for carbon metabolism |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 87,887 | 0 | C | T | 17.3% | 271.5 / 44.5 | 121 | intergenic (+39/‑141) | ilvH/cra | acetolactate synthase 3, small subunit, valine‑sensitive/transcriptional repressor‑activator for carbon metabolism |
| Reads supporting (aligned to +/- strand): ref base C (42/57); new base T (13/8); total (56/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.38e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
TGTGGAGGTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACCCATACCAG > NC_000913/87788‑87986 | tgtgGAGGTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCAc > 1:209425/1‑100 (MQ=255) gtgGAGGTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACg > 1:857134/1‑100 (MQ=255) gAGGTTGCTCGCTCTGGTGTGGACGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTg > 1:1690757/1‑100 (MQ=255) ggTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTgg > 1:695306/1‑99 (MQ=255) gTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACGTGTCATGTTGGGc < 2:510193/100‑1 (MQ=255) gTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGc < 2:86166/100‑1 (MQ=255) gTTGCTCGCTCTGGGGTGGTCGGACTTTCTCGCGGCGATAAAATTATGCGTTGGGAATTATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGc < 1:1594085/100‑1 (MQ=255) ttGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACGTGACATGTTGGGC‑t < 1:1235961/100‑1 (MQ=255) tGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACGTGACATGTTGGGC‑tg < 1:2236108/100‑2 (MQ=255) tGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACGTGACATGTTGGGC‑tg < 2:312840/100‑2 (MQ=255) tGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACGTGACATGTTGGGC‑tg < 1:1877989/100‑2 (MQ=255) tGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑tt > 2:2135910/1‑100 (MQ=255) ctcgctcTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAACGATCTCAATGCGCAATTTACAGCCCAACGTGACATGTTGGGC‑tgt < 1:2429127/99‑3 (MQ=38) cgctcTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑tttttt > 2:339474/1‑100 (MQ=255) gctcTGGTGTGGTCGAACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACGTGACATGTTGGGC‑tgtaaat < 2:2869870/100‑7 (MQ=37) ctctGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTg < 1:1116008/100‑1 (MQ=255) tGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCg < 1:2616969/99‑1 (MQ=255) ggTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGaa < 1:2085628/100‑1 (MQ=255) ggTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTGGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGaa < 1:1243031/100‑1 (MQ=255) gtgGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑ttttttttcttatt > 1:1851260/1‑92 (MQ=255) gtgGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATc < 2:195388/100‑1 (MQ=255) ggTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑tttttttttttttt > 1:597667/1‑90 (MQ=255) ggTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAg > 2:1572990/1‑100 (MQ=255) tCGGACTTTCGCGCTGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTg < 1:1702178/100‑1 (MQ=255) tCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTg < 1:2491890/100‑1 (MQ=255) tCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTg < 2:1007414/100‑1 (MQ=255) tCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTg < 2:2566135/100‑1 (MQ=255) tCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTg < 2:310276/100‑1 (MQ=255) cGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTgg < 2:912373/100‑1 (MQ=255) ggACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTggg < 1:539764/100‑1 (MQ=255) gACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGa > 1:983073/1‑100 (MQ=255) cTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAAc > 2:954837/1‑100 (MQ=255) tttCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAAcc < 2:1783790/100‑1 (MQ=255) cgcgcgGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTgg < 1:2791951/100‑1 (MQ=255) cgcgcgGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTgg > 2:2050698/1‑100 (MQ=255) gcgcgGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTgg < 2:1492324/99‑1 (MQ=255) cgcgGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGaa < 2:981950/100‑1 (MQ=255) cgATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATaaaa < 2:778842/100‑1 (MQ=255) gATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAg > 1:2742984/1‑100 (MQ=255) gATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAg < 2:2474459/100‑1 (MQ=255) aTAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGCTTTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAg < 1:1667126/100‑1 (MQ=255) aTAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGc < 1:889363/100‑1 (MQ=255) aTAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGc > 1:923558/1‑100 (MQ=255) tAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAg < 1:185589/98‑1 (MQ=255) aaaaTAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAg < 2:1242010/100‑1 (MQ=255) aaaaTAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAg < 2:1865579/100‑1 (MQ=255) aaaaTAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAg > 2:751203/1‑100 (MQ=255) aaaTAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGt > 1:154025/1‑100 (MQ=255) tGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGc > 2:2791810/1‑100 (MQ=255) gCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCg < 1:2036370/98‑1 (MQ=255) gCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCa < 2:951955/100‑1 (MQ=255) gCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCa > 2:857601/1‑100 (MQ=255) cGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAg > 2:1997162/1‑100 (MQ=255) gTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGt > 2:763764/1‑100 (MQ=255) gaATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGCAATAAAAGCAGTTGCCGCAGTTAAtt > 1:2416876/1‑100 (MQ=255) aTGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAAtttt < 2:1571436/100‑1 (MQ=255) tGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTc < 2:833517/100‑1 (MQ=255) gATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCt > 1:662749/1‑100 (MQ=255) gATCTCAATGCGCAATTTACAGCCCAACATGTCAAGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACATGGAATAAAAGCAGTTGCCGCAGTTAATTTTCt > 2:1675176/1‑100 (MQ=255) tctcAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTgc > 2:623892/1‑100 (MQ=255) tctcAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTgc > 2:1496932/1‑100 (MQ=255) tctcAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTgc < 1:1151849/100‑1 (MQ=255) ctcAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTgcg < 2:81258/100‑1 (MQ=255) cAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTTTTTAATCAGTGAGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTTCGCt > 1:2217911/1‑100 (MQ=255) cAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCt < 1:1638549/100‑1 (MQ=255) cAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCt > 1:1486953/1‑100 (MQ=255) aaTGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCt > 1:2692519/1‑99 (MQ=255) aTGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCtt < 1:662970/99‑1 (MQ=255) aTGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTa < 2:347617/100‑1 (MQ=255) aTGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTa < 2:1170790/100‑1 (MQ=255) gcgcAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGa < 1:2883755/100‑1 (MQ=255) gcgcAATTTACAGCCAAACATGGCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTGAATTTTCTGCGCTTAg < 1:696925/99‑1 (MQ=255) cgcAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGAt < 1:2135897/100‑1 (MQ=255) gcaaaaaaaGCCCAACGTGACATGTTGGGC‑TTTTTTTGCAAAATCAGTGGGAACCAGGCATAAAAACAGTTACCGCAGGTAAGTTTCAGCGCTTAGa > 1:2411184/9‑97 (MQ=16) cttccgatctccAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGtt < 2:1604453/90‑1 (MQ=255) caaaaaaaGCCCAACGTGACATGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGtt > 2:2401847/8‑100 (MQ=37) caaaaaaaGCCCAACGTGACATGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGtt > 1:2208640/8‑100 (MQ=38) caaaaaaaGCCCAACGTGACATGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGtt > 2:1918860/8‑100 (MQ=37) aaTTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCTCAGTTAATTTTCTGCGCTTAGATGtt < 2:597670/100‑1 (MQ=255) aaTTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGtt > 2:1008786/1‑100 (MQ=255) aaTTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGtt < 1:1997151/100‑1 (MQ=255) aaaaaaaGCCCAACGTGACATGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTa > 2:1702909/7‑100 (MQ=38) ttACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGGTGTTAAt < 2:1115489/100‑1 (MQ=255) cAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGaa < 2:1590271/100‑1 (MQ=255) ngCCCAACGTGACATGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAAt > 2:1533219/2‑100 (MQ=255) aGCCCAACGTGACATGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAAt > 2:1261552/1‑100 (MQ=255) gCCCAACGTGACATGTTGGGC‑TTTTTTTTTTAATTCATTGGGAACCTGGAATAAAAGCAGTTGCCTCAGTTAATTTTCTGCGCTTAGATGTTAATGAAtt > 1:2892328/1‑100 (MQ=255) gCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAAtt > 2:680413/1‑100 (MQ=255) gCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAAtt < 2:2217707/100‑1 (MQ=255) gCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAAtt < 2:299863/100‑1 (MQ=255) ccAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTagatcggaag > 1:1604447/1‑91 (MQ=255) aaCATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAACAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAAc < 2:57952/100‑1 (MQ=255) aaCATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAAc < 2:377390/100‑1 (MQ=255) cATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAAccc < 2:2035430/100‑1 (MQ=255) tGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACCCAt < 2:1478256/100‑1 (MQ=255) gTCACGTTGGGC‑TTTTTTTTCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACCCATa > 1:918317/1‑100 (MQ=255) tCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACCCATAc > 2:852547/1‑100 (MQ=255) cGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACCCATACCAg > 2:100021/1‑100 (MQ=255) cGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACCCATACCAg > 2:28890/1‑100 (MQ=255) cGTTGGGC‑TTTTTTTGCGAAATAAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACACATAcc > 1:1939783/1‑98 (MQ=255) | TGTGGAGGTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGAGAATGATCTCAATGCGCAATTTACAGCCCAACATGTCACGTTGGGC‑TTTTTTTGCGAAATCAGTGGGAACCTGGAATAAAAGCAGTTGCCGCAGTTAATTTTCTGCGCTTAGATGTTAATGAATTTAACCCATACCAG > NC_000913/87788‑87986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |