| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,764,687 | T→C | 20.8% | intergenic (‑301/+247) | sufA ← / ← ydiH | Fe‑S cluster assembly protein/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,764,687 | 0 | T | C | 20.8% | 226.2 / 59.6 | 122 | intergenic (‑301/+247) | sufA/ydiH | Fe‑S cluster assembly protein/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base T (55/41); new base C (9/16); total (65/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.29e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.10e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
GCATTAAGGCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCA > NC_000913/1764588‑1764784 | cATTAAGGCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTc > 1:1352893/1‑100 (MQ=255) tAAGGCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTAAGAAATAAGAAAACCCTTAAGtat > 1:2067804/1‑96 (MQ=255) aaGGCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCtgtg > 1:881399/1‑100 (MQ=255) aGGCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCtgtg < 1:854466/99‑1 (MQ=255) aGGCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑c < 2:1863664/100‑1 (MQ=255) aGGCAGTAATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑c < 1:2633467/100‑1 (MQ=255) gCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑Cg > 2:1258687/1‑99 (MQ=255) cTGTGGTGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAGATAAGAAAACCCTTAAGTCTGTG‑CGac > 1:1643707/1‑100 (MQ=255) cTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATGTAAGAGATAGGTAACAAAGTGAAGCGTTCAGAAATAAGAAAACGCTTAAGTCTGTG‑c > 1:616252/1‑97 (MQ=255) atgaAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCtgtgtcgcacaga < 2:257991/100‑10 (MQ=39) tgaAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGc > 2:1364973/1‑100 (MQ=255) tgaAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGc > 1:2492506/1‑100 (MQ=255) aaagaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTaa < 2:2109487/100‑1 (MQ=255) agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAgg < 1:1032571/100‑1 (MQ=255) agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAgg > 2:1969671/1‑100 (MQ=255) agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAgg < 2:1219737/100‑1 (MQ=37) agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAgg < 1:1195683/100‑1 (MQ=37) agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAgg < 2:2168332/100‑1 (MQ=37) agaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAgg < 1:2290791/100‑1 (MQ=37) gaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAggg < 2:2772566/100‑1 (MQ=37) gaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAggg < 1:668406/100‑1 (MQ=37) gaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTG‑TCGCACAGACTTAAggg < 2:1051797/100‑1 (MQ=37) gaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTG‑TCGCACAGACTTAAggg < 2:2385261/100‑1 (MQ=37) gaaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGCTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTaa > 1:1760031/1‑97 (MQ=255) aaaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑t > 1:129715/1‑100 (MQ=255) aaaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑tt < 2:800579/100‑1 (MQ=37) aaagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑ttt < 2:681117/100‑1 (MQ=25) aagTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTc < 1:547004/100‑1 (MQ=255) ttGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTAc > 2:795163/1‑100 (MQ=255) tGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTAcc < 2:1163826/100‑1 (MQ=255) tATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTAcccc > 1:1227202/1‑100 (MQ=255) tATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTAcccc > 1:436299/1‑100 (MQ=255) tATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑ttttcttatt < 1:2275342/100‑8 (MQ=21) aTTGACAATGACTATTTAAAAATTAGGCGAAACAGTGCAGCGTTCAGAACTAATAAACCCCTTAGGTCTGTG‑CGCCACAGGCTTGCGGG‑TTGCTAcc < 1:854122/97‑1 (MQ=255) aTTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCa > 1:1567763/1‑100 (MQ=255) aTTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCa > 1:2736947/1‑100 (MQ=255) aTTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCa > 1:975718/1‑100 (MQ=255) aTTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCa > 1:581334/1‑100 (MQ=255) aTTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCa > 1:2219874/1‑100 (MQ=255) ttGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCAt > 2:2782594/1‑100 (MQ=255) tagAAAATGACTAATTAAGAGATAGGTAAAAAAGTGCAGCGTACAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCAt > 2:1976392/3‑100 (MQ=255) tGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑ttttcttatttct < 2:676990/100‑11 (MQ=18) aaTGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGgc < 2:581337/100‑1 (MQ=255) gACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCt < 1:204481/100‑1 (MQ=255) aCTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACACTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCtt > 1:2553567/1‑100 (MQ=255) cTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTa < 2:1300216/100‑1 (MQ=255) cTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTa < 2:1790275/100‑1 (MQ=255) cTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTa < 2:1923181/100‑1 (MQ=255) cTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTa < 1:1105637/100‑1 (MQ=255) aTTTGAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCTCGTAtc > 2:2188081/1‑100 (MQ=255) aTTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTAtc > 2:39846/1‑100 (MQ=255) aTTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTAtc > 1:539626/1‑100 (MQ=255) tAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTcc > 1:2493418/1‑100 (MQ=255) tAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTcc < 2:1673986/100‑1 (MQ=255) tAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTcc > 1:1994092/1‑100 (MQ=255) tAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTCCTACCCCATCCGGCGCTTATCTcc < 2:1808461/100‑1 (MQ=255) agcgaTAGGTAAAAAAGTGCAGCGTTCAGAAATCAGAAAACCCTTAAGACTGTG‑CGACACAGGCATAAGGG‑TTTCTACCCCATCCGGCGCTTAtc > 1:2754515/4‑95 (MQ=255) gaTAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCAc > 2:1652584/1‑100 (MQ=255) gatctaaaaaGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCActcn < 2:1320636/95‑2 (MQ=255) ggTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACtctc > 1:2577993/1‑100 (MQ=255) gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCa > 2:708711/1‑100 (MQ=255) gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCa > 1:1495834/1‑100 (MQ=255) gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCa > 2:1843674/1‑100 (MQ=255) gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCa < 2:1120120/100‑1 (MQ=255) gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCa < 2:106859/100‑1 (MQ=255) gTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑ATTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCa > 2:834526/1‑100 (MQ=255) tAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAg > 1:1881937/1‑100 (MQ=255) naaaaGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCActctagatc > 1:1320631/2‑95 (MQ=255) aaaaGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTgg > 1:392365/1‑100 (MQ=255) gCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGc > 2:1547295/1‑100 (MQ=255) gTTCATAAATAAGAAAACCCTTAAGTCAGTG‑CGACAAAGGCTTAAGGT‑TTTCTACGCCATCCGGCGCTTATCTCCGTCACTCTCAGTTACTTAGCTCTTg < 1:2315138/100‑1 (MQ=255) attCAGAAATAAGAAAACACTTAAGTCTGTG‑CGACACAGGATTAAGGG‑ATTCTACACCAAAGGGCGCTTAACTACGGCACTGTCAGTGGCTTAActgt > 1:1408935/2‑96 (MQ=255) ttCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGa > 1:1858204/1‑100 (MQ=255) tCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGaa < 2:1953559/100‑1 (MQ=255) cAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAg > 2:1557753/1‑100 (MQ=255) cAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAg > 2:462891/1‑100 (MQ=255) cAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAg > 1:2058803/1‑100 (MQ=255) gAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCTTCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAggg < 1:708688/100‑1 (MQ=255) gAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGctctagatcgg > 1:2899435/1‑93 (MQ=255) aaTAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGc < 1:2382659/100‑1 (MQ=255) aaTAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGc > 2:2356893/1‑100 (MQ=255) ttccgatcccccTTAAGCCTGTG‑TCGCACAGACTTAAGGGTTTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGc < 2:694502/91‑1 (MQ=21) aGAAAACCCTGAAGTCTGTG‑CGACACAGGCTGAAGGG‑TTTCTACCCCATCCGGGGCATATGTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATa < 1:2801541/100‑1 (MQ=255) aaaCCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGa < 1:462888/100‑1 (MQ=255) aaCCCTTGAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCGACCCCAGCCGGCGCTTATCGCCGGCACTCGCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaa < 1:386191/100‑1 (MQ=255) aaCCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaa > 2:1163599/1‑100 (MQ=255) aaCCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaa < 2:1490620/100‑1 (MQ=255) aaCCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaa > 2:1635889/1‑100 (MQ=37) aCCCTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCAGTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaat > 2:2778896/1‑100 (MQ=25) aCCCTTAAGCCTGTG‑TCGCACAGACTTAAGGGTTTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaa > 2:573577/1‑100 (MQ=25) cccTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaata < 2:1352898/100‑1 (MQ=255) cccTTAAGCCTGTGTCG‑CACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaata > 2:1801245/1‑100 (MQ=37) cccTTAAGCCTGTG‑TCGCACAGACTTAAGGGTTTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGcagatcgga > 1:694499/1‑91 (MQ=18) cccTTAAGCCTGTG‑TCGCACAGACTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaat > 1:824994/1‑99 (MQ=37) ccTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaataa > 2:2077286/1‑100 (MQ=255) ccTTAAGCATGTG‑CGACACAGGCTCAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCTTCACGCTCATTGTCTTAGCTCTGGAAGTGTCGATAAGaata > 1:1261223/1‑99 (MQ=255) cTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGaataa < 1:1955624/99‑1 (MQ=255) tAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAAtct < 2:1898033/100‑1 (MQ=255) tAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAAtct > 2:193411/1‑100 (MQ=255) aGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCa < 2:359337/100‑1 (MQ=255) | GCATTAAGGCTGTGATGAAAAAGAAAAAGTTGTATTGAAAATGACTATTTAAGAGATAGGTAAAAAAGTGCAGCGTTCAGAAATAAGAAAACCCTTAAGTCTGTG‑CGACACAGGCTTAAGGG‑TTTCTACCCCATCCGGCGCTTATCTCCGGCACTCTCAGTGGCTTAGCTCTTGAAGGGGCGATAAGAATAATCTCA > NC_000913/1764588‑1764784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |