Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 758,290 Δ1 bp coding (602/717 nt) sdhB → succinate dehydrogenase, FeS subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913758,2890T.99.1% 474.3 / ‑2.6 106coding (601/717 nt)sdhBsuccinate dehydrogenase, FeS subunit
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base . (51/54);  total (52/54)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01

Only 100 of 109 total aligned reads displayed.

AAGTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCATTCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATG  >  NC_000913/758190‑758384
                                                                                                   |                                                                                               
aaGTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTCTGAGTGATGCAt                                                                                                 <  1:1993033/100‑1 (MQ=255)
 aGTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCAtc                                                                                                <  2:1101306/100‑2 (MQ=255)
  gTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCAtca                                                                                               >  1:633916/1‑98 (MQ=255)
     tATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCg                                                                                           <  2:1363927/100‑1 (MQ=255)
      aTCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGt                                                                                          <  2:2025416/100‑1 (MQ=255)
         ggCCCGGCAGGCTTGTTAGCTGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTAtt                                                                                       >  1:2850509/1‑100 (MQ=255)
         ggCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTAtt                                                                                       <  1:2314679/100‑1 (MQ=255)
         ggCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTAtt                                                                                       >  2:509363/1‑100 (MQ=255)
          gCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTc                                                                                      >  2:671544/1‑100 (MQ=255)
             cGGCAGGCTTGTTAACGGCATAACGCTTCCTGATTGATAGCCGTGATACCGAGACTGCCAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGc                                                                                   <  1:601205/100‑1 (MQ=255)
              ggCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCt                                                                                  >  1:1132554/1‑100 (MQ=255)
               tctggCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTg                                                                                 <  1:1020157/97‑1 (MQ=255)
               gCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTg                                                                                 <  2:2640091/100‑1 (MQ=255)
               gCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTg                                                                                 <  1:253440/100‑1 (MQ=255)
               gCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTg                                                                                 >  1:1079084/1‑100 (MQ=255)
                cAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGt                                                                                >  2:1725464/1‑100 (MQ=255)
                 aGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTc                                                                               <  1:1417801/100‑1 (MQ=255)
                  ggCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTgaga                                                                              >  2:1020147/1‑97 (MQ=255)
                  ggCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTca                                                                              >  2:1910801/1‑100 (MQ=255)
                  ggCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTca                                                                              >  2:429669/1‑100 (MQ=255)
                   gCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTcac                                                                             >  1:372318/1‑100 (MQ=255)
                    cTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTcaca                                                                            >  2:1110630/1‑100 (MQ=255)
                    cTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTcaca                                                                            <  1:1300508/100‑1 (MQ=255)
                     ttGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAg                                                                           <  1:2506935/100‑1 (MQ=255)
                      tGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGc                                                                          >  1:398689/1‑100 (MQ=255)
                        ttAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGcat                                                                        <  2:51714/100‑1 (MQ=255)
                         tAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGcaac                                                                       <  1:671551/100‑3 (MQ=255)
                          aGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGcatca                                                                      <  2:1104377/100‑1 (MQ=255)
                           gCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGcatcat                                                                     <  2:586250/100‑1 (MQ=255)
                            cGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATg                                                                    >  2:512692/1‑100 (MQ=255)
                            cGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATg                                                                    <  2:2818032/100‑1 (MQ=255)
                            cGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATg                                                                    <  2:802996/100‑1 (MQ=255)
                             ggCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGa                                                                   <  1:2448938/100‑1 (MQ=255)
                             ggCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGa                                                                   <  1:1718230/100‑1 (MQ=255)
                             ggCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGa                                                                   <  2:2924520/100‑1 (MQ=255)
                             ggCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGa                                                                   <  1:1864520/100‑1 (MQ=255)
                               cATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAAc                                                                 <  2:1079074/100‑1 (MQ=255)
                                 tatCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTg                                                               <  1:2688540/100‑1 (MQ=255)
                                 tatCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTg                                                               >  1:1617289/1‑100 (MQ=255)
                                 tatCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTg                                                               <  2:2543693/100‑1 (MQ=255)
                                    cGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGAGTATTCCGCTGTCACAGCACCATGAACTGCGt                                                            >  2:797797/1‑100 (MQ=255)
                                     gTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCCCAGCATCATGAACTGCggc                                                           >  1:3032251/1‑98 (MQ=255)
                                     gTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTc                                                           >  1:880596/1‑100 (MQ=255)
                                     gTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTGTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACGGAAACATGAACAGCGt                                                            >  2:3028189/1‑99 (MQ=255)
                                     gTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTATGAGAGATGTA‑TGAGCGTATTCCACTGTCACAGCATCATGAACTGCg                                                             >  2:1126370/1‑98 (MQ=255)
                                       ttCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAg                                                         <  1:242968/100‑1 (MQ=255)
                                         ccTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAgtg                                                       >  1:1063597/1‑100 (MQ=255)
                                         ccTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAgtg                                                       <  1:1739318/100‑1 (MQ=255)
                                             attgatAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATg                                                   <  2:1485160/100‑1 (MQ=255)
                                                gatAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTcc                                                >  1:1450964/1‑100 (MQ=255)
                                                 atAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCg                                               <  1:1651241/100‑1 (MQ=255)
                                                 atAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCg                                               <  1:347843/100‑1 (MQ=255)
                                                   aGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGaa                                             >  1:172932/1‑100 (MQ=255)
                                                    gCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAg                                            <  2:2033648/100‑1 (MQ=255)
                                                    gCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAg                                            <  1:702715/100‑1 (MQ=255)
                                                      cGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAggg                                          >  2:1283981/1‑100 (MQ=255)
                                                        tGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCTTCATGAACTGCGTCAGTGTATGTCCGAAGGGGc                                        <  2:2001648/100‑1 (MQ=255)
                                                        tGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGc                                        <  1:782278/100‑1 (MQ=255)
                                                         gATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCt                                       >  2:1556050/1‑100 (MQ=255)
                                                           tACCGAGACTGACAGCCGCCTCGACGGTTTTATTGCTGCA‑TCAGCGTATTCCGCTGTCACACCATCATGGACTGCGTCAGTGTATGTCCGAGGGGGCTGa                                     >  2:285548/1‑100 (MQ=255)
                                                            aCCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGa                                     >  1:2027481/1‑99 (MQ=255)
                                                            aCCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGACAGTGTATGTCCGAAGGGGCTGaa                                    >  2:2562072/1‑100 (MQ=255)
                                                             ccGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACCGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAAc                                   >  2:2785397/1‑100 (MQ=255)
                                                             ccGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAAc                                   <  1:2523775/100‑1 (MQ=255)
                                                               gagaCTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAAccc                                 >  2:1310604/1‑100 (MQ=255)
                                                               gagaCTGACAGCCGCCGCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCAGCATGAACGGCGTCAGTGTATGTCCGAAGGGGCTGAAccc                                 <  2:1035636/100‑1 (MQ=255)
                                                                agaCTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAAccc                                 <  1:1767710/99‑1 (MQ=255)
                                                                   cTGACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAcg                             <  2:2995013/100‑1 (MQ=255)
                                                                     gACAGCCGCCTCGACGGTTTGAGTGATGCATTCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAcgc                            >  1:2003725/1‑100 (MQ=255)
                                                                     gACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAcgcg                           <  2:172931/100‑1 (MQ=255)
                                                                     gACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAcgcg                           >  2:345073/1‑100 (MQ=255)
                                                                     gACAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAAATGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAcgc                            >  2:1252136/1‑99 (MQ=255)
                                                                       cAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAcgcgcg                         <  2:184309/100‑1 (MQ=255)
                                                                       cAGCCGCCTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGAcgcgcg                         >  2:2665249/1‑100 (MQ=255)
                                                                         gccgccTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGcc                       >  1:1550534/1‑100 (MQ=255)
                                                                         gccgccTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGcc                       >  2:1079413/1‑100 (MQ=255)
                                                                         gccgccTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGcc                       <  1:947132/100‑1 (MQ=255)
                                                                            gacTCGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATc                    >  1:2058131/3‑100 (MQ=255)
                                                                                cGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGcc                <  2:855798/100‑1 (MQ=255)
                                                                                cGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGcc                >  1:1294468/1‑100 (MQ=255)
                                                                                cGACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGc                 >  2:1367389/1‑99 (MQ=255)
                                                                                 gACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAGCTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGcc                <  2:856760/99‑1 (MQ=255)
                                                                                 gACGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCa               >  1:1529654/1‑100 (MQ=255)
                                                                                 gACGGTTGGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGcc                <  2:1907306/99‑1 (MQ=255)
                                                                                   tcttttGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCata             <  1:2808181/97‑1 (MQ=255)
                                                                                   cGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCata             <  2:2850483/100‑1 (MQ=255)
                                                                                   cGGTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCata             >  2:1599689/1‑100 (MQ=255)
                                                                                    ggTTTGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCatat            >  2:746172/1‑100 (MQ=255)
                                                                                      tttGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCataaga          >  2:2808156/1‑97 (MQ=255)
                                                                                      tttGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCa          <  1:869438/100‑1 (MQ=255)
                                                                                      tttGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCa          <  1:1725479/100‑1 (MQ=255)
                                                                                       ttGAGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCa          >  2:1913708/1‑99 (MQ=255)
                                                                                          tgTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTc      <  2:2031366/99‑1 (MQ=255)
                                                                                          aGTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTc      <  1:2289434/100‑1 (MQ=255)
                                                                                           gTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTca     >  1:2031384/1‑99 (MQ=255)
                                                                                           gTGATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCg     >  1:705426/1‑100 (MQ=255)
                                                                                             gATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGAt   >  2:1062827/1‑100 (MQ=255)
                                                                                             gATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTAGAt   >  2:2052158/1‑100 (MQ=255)
                                                                                             gATGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGGCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGAt   >  1:2808000/1‑100 (MQ=255)
                                                                                              aTGCA‑TCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGAtg  <  1:512698/100‑1 (MQ=255)
                                                                                                   |                                                                                               
AAGTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCATTCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATG  >  NC_000913/758190‑758384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑