| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,765,794 | (C)7→6 | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,788 | 0 | C | . | 97.4% | 494.5 / 4.7 | 113 | intergenic (‑12/‑130) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base . (57/53); total (58/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 127 total aligned reads displayed.
TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑CCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTA > NC_000913/2765689‑2765883 | tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑c > 1:405245/1‑100 (MQ=255)tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑c > 1:1447907/1‑100 (MQ=255) tCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑cct < 1:64411/100‑2 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGGGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccc < 2:752451/100‑1 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccc < 2:2270721/100‑1 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccc > 1:924853/1‑100 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccc < 1:75811/99‑1 (MQ=255) nggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccccgg > 2:2776494/2‑98 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccccggt < 1:252548/100‑4 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccccggt > 1:607241/1‑97 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑ccccccggt > 2:193402/1‑97 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAg > 2:106523/1‑100 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAg < 2:872631/100‑1 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACAGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGa < 1:43900/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGa < 1:1584967/100‑1 (MQ=255) tACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCt > 1:704201/1‑100 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTg > 1:3000901/1‑100 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTg > 1:828033/1‑100 (MQ=255) cTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGc > 2:3020939/1‑100 (MQ=255) cTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGc > 1:2181716/1‑100 (MQ=255) tAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGcc > 2:1816967/1‑100 (MQ=255) aGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCt < 1:2558824/100‑1 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGtt > 1:1254353/1‑100 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTg < 1:2902237/100‑1 (MQ=255) aGTTGCTGCTTGGTGAGATAAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTg > 2:633158/1‑100 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTgg < 1:90546/100‑1 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTgg < 2:2291231/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAg > 1:188947/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAg < 2:2461348/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAg < 2:364037/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAg > 1:297317/1‑100 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGt > 2:2801332/1‑100 (MQ=255) tgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGc > 1:157569/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTg > 2:1684812/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGcc > 1:2817756/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGcc > 1:2118438/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGcc > 2:2986992/1‑100 (MQ=255) cttccgatctaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGcc < 1:138979/90‑1 (MQ=255) ttGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGcccc < 1:1453679/100‑1 (MQ=255) ttGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGcccc > 2:227505/1‑100 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:1264836/100‑1 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCt > 1:2505264/1‑100 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCt > 1:1732734/1‑100 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTc > 1:2729651/1‑100 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa > 2:2644554/1‑100 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa > 1:2704279/1‑100 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccagatcggaag > 2:138978/1‑90 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg > 2:2840668/1‑100 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 1:581838/100‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg > 1:1533030/1‑100 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTaagatcgg > 2:720017/1‑93 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt > 2:405641/1‑100 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 2:2546787/100‑1 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTgg > 1:2904039/1‑100 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 1:426012/100‑1 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCt < 1:2429570/100‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTa < 2:2209941/100‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaa < 1:428753/100‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaa > 2:1261636/1‑100 (MQ=255) ttACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAttt > 1:2136183/1‑100 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa < 2:828026/100‑1 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg > 2:2479300/1‑100 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 1:1101029/100‑1 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 1:1940851/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc > 1:1133962/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 2:471441/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 1:117837/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc > 1:1619757/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 1:2607384/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 1:297883/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 1:942483/100‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCa > 2:2380375/1‑100 (MQ=255) tGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1839824/100‑1 (MQ=255) tGGACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 2:2655961/100‑1 (MQ=255) ggACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 1:1874854/100‑1 (MQ=255) ggACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 1:2612277/100‑1 (MQ=255) ggACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 2:2517079/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATaca > 1:2700790/1‑100 (MQ=255) aCATCATCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 2:82398/98‑1 (MQ=255) catcatCCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt < 1:1424961/100‑1 (MQ=255) atcatcCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACtt < 2:2101519/100‑1 (MQ=255) catcCCCCATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCa > 2:1550702/1‑100 (MQ=255) ccccATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 1:872522/1‑100 (MQ=255) cccATTTTGTGGACTGCCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 1:1684826/100‑1 (MQ=255) cccATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggggg > 2:1326505/1‑100 (MQ=255) cccATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggggg > 2:1519600/1‑100 (MQ=255) ccATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:2867559/100‑1 (MQ=255) ccATTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg > 2:778961/1‑100 (MQ=255) aTTTTGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta > 1:2766298/1‑100 (MQ=255) ttttGTGGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtat < 2:570523/100‑1 (MQ=255) tgtgGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtattat < 2:188944/100‑1 (MQ=255) gtgGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:1560789/1‑100 (MQ=255) tgGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:1858260/100‑1 (MQ=255) tgGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg > 2:3013783/1‑100 (MQ=255) tgGACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:2644577/100‑1 (MQ=255) ggACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGt > 2:2616269/1‑100 (MQ=255) ggACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGt < 1:896705/100‑1 (MQ=255) ggACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGt > 2:792566/1‑100 (MQ=255) gACTG‑‑CCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTa > 1:2088082/1‑100 (MQ=255) gACTG‑‑CCCCCCAGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGCGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGAATTATTGTa > 2:1171014/1‑100 (MQ=255) | TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑CCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTA > NC_000913/2765689‑2765883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |