| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 561,696 | (G)6→7 | coding (2000/2604 nt) | sfmD → | putative outer membrane export usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 561,690 | 1 | . | G | 92.0% | 282.5 / 17.8 | 87 | coding (1994/2604 nt) | sfmD | putative outer membrane export usher protein |
| Reads supporting (aligned to +/- strand): ref base . (5/2); new base G (38/42); total (43/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
AAGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAGC > NC_000913/561591‑561784 | aaGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑t > 2:2457300/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑g > 1:1238600/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑g > 1:1782066/1‑100 (MQ=255) gCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGCACGC‑T‑c‑g‑g > 2:2806007/1‑100 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gg < 2:1708733/100‑1 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gg > 1:2257330/1‑100 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gg < 2:1621889/100‑1 (MQ=255) ccACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gg < 2:948801/100‑1 (MQ=255) cacaACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑ggg < 1:450313/100‑1 (MQ=255) cacaACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑ggg < 1:1790897/100‑1 (MQ=255) caACCTGAGTTATCACGTAAGCCAGGGTGATACCGCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑ggggg > 1:1654822/1‑99 (MQ=255) aCCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gggggcg < 1:1909600/100‑4 (MQ=255) ccTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gggggcg < 1:1625991/99‑4 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gggggcggg < 2:1913564/100‑6 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gggggcggg < 2:1527151/100‑6 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑G‑G‑GGGGCGGGt > 1:96419/1‑100 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑C‑g‑g‑gggggcggg > 1:1210546/1‑95 (MQ=255) cTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGCCAGGCCGCTTACGGTACGC‑T‑g‑g‑gggggcgtg < 1:2040561/100‑6 (MQ=255) cTGAGTTATCACGGAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑g‑g‑gggggcggg < 1:1406420/100‑6 (MQ=255) tGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGt < 2:1881666/100‑1 (MQ=255) tGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑G‑G‑GGGGCGGGta < 2:1640123/100‑1 (MQ=255) gTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGtata > 2:1151981/1‑100 (MQ=255) tgtCACGTATGTCGGGGTGATACCTCGAATAATAGTTATCCGGGAAGCGCCACGGCCCCCTGGCAGGCCGCTAAAGGTACGC‑C‑G‑GAGGGGCGGGGATAAc > 2:564161/3‑100 (MQ=255) tATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAAc < 2:1453658/100‑1 (MQ=255) ctaCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTa < 2:2029236/98‑1 (MQ=255) cACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTAc > 2:1282877/1‑100 (MQ=255) cACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTAc < 2:131300/100‑1 (MQ=255) cACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTAc > 2:2548372/1‑100 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTCCGGTCCGC‑TGG‑G‑GGGGCGGGTCTAACTACg > 2:2913860/1‑100 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTaag > 1:2029254/1‑98 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACg < 2:1238589/100‑1 (MQ=255) aCGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACg < 1:363867/100‑1 (MQ=255) cGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACg < 1:1186946/99‑1 (MQ=255) cGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGa > 2:2904565/1‑100 (MQ=255) cGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGa > 1:1625543/1‑100 (MQ=255) tAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGAcc > 1:1206906/1‑100 (MQ=255) cAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGAt > 1:412786/1‑100 (MQ=255) tacgTGATAACTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATc < 2:211261/97‑1 (MQ=255) gggTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCa < 1:2664959/100‑1 (MQ=255) tGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACa < 2:299872/100‑1 (MQ=255) tGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACa < 2:2090054/100‑1 (MQ=255) gATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACAt > 1:2639383/1‑100 (MQ=255) aTACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACAt > 2:505230/1‑99 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 1:2076046/1‑100 (MQ=255) ccTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACg > 2:1305044/1‑100 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCAC‑G‑G‑GGCGCGGGTATAACTACGACCGCGATCAACATGACg > 2:2558124/1‑99 (MQ=255) cTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGt > 2:2782288/1‑100 (MQ=255) tCGAATCATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGCCGtt > 1:2893729/1‑100 (MQ=255) tCGAATAATGGGTACACGGTCACCTCCACGGCAAACTGGCAGACCGCTTACGGTACGC‑T‑GAG‑GTGGCGGGTATAACTACGACCTCGATCAACATGACg < 2:1085390/98‑1 (MQ=255) tCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGtt > 1:283512/1‑100 (MQ=255) tCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGtt > 2:2079909/1‑100 (MQ=255) aatGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTgg > 2:717225/1‑100 (MQ=255) aatGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTgg > 1:2800438/1‑100 (MQ=255) atGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGc > 2:2146698/1‑100 (MQ=255) atGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGc < 1:1475517/100‑1 (MQ=255) atGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGc < 2:2648667/100‑1 (MQ=255) ggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc < 2:905920/100‑1 (MQ=255) ggTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGc > 2:2037326/1‑100 (MQ=255) tACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTg > 2:295722/1‑100 (MQ=255) ggCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGCCCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGc < 2:1654808/100‑1 (MQ=255) ggCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGc > 2:2887320/1‑100 (MQ=255) ggCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGc < 1:2079928/100‑1 (MQ=255) gCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCg > 1:1048259/1‑100 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGTAGCTGTCTGGccg < 1:2059247/100‑3 (MQ=255) cAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCgg < 1:1111713/100‑1 (MQ=255) gcgcCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtg < 1:775677/100‑1 (MQ=255) cgcCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGGCGTTAACTGGCAGCTGTCTGGCGgtgt < 1:321004/100‑1 (MQ=255) cgcCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtgt > 2:1649821/1‑100 (MQ=255) cgcCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGgtgt < 2:412782/100‑1 (MQ=255) ccACGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTgg > 1:2709237/1‑100 (MQ=255) cGGCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCg > 1:2836180/1‑100 (MQ=255) gCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg < 1:2548395/100‑1 (MQ=255) gCAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCggg > 2:89301/1‑100 (MQ=255) cAAACTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGc < 2:139076/100‑1 (MQ=255) aaCTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCAt < 1:1282890/100‑1 (MQ=255) aCTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATg < 2:1317911/100‑1 (MQ=255) cTGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGa < 1:825422/100‑1 (MQ=255) cTGGCAGGCCGCTTACGGTACGC‑T‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGaa > 1:425270/1‑100 (MQ=255) tGGCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGaa < 1:295725/100‑1 (MQ=255) ggCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGaag > 2:825415/1‑99 (MQ=255) gCAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGaaaa > 2:2662420/1‑100 (MQ=255) cAGGCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAAt > 1:216286/1‑100 (MQ=255) ggCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg > 2:2363233/1‑100 (MQ=255) ggCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg < 1:2401516/100‑1 (MQ=255) ggCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg > 2:2907219/1‑100 (MQ=255) ggCCGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATgg < 1:2401515/100‑1 (MQ=255) ggCCGCTTACGGTACGC‑T‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGc > 2:2073010/1‑100 (MQ=255) ccGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCa < 1:2904591/100‑1 (MQ=255) ccGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCa < 1:2457322/100‑1 (MQ=255) cGCTTACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCAt < 1:2523725/100‑1 (MQ=255) tACGGTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACg < 1:1649835/100‑1 (MQ=255) ggTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTg < 2:952416/100‑1 (MQ=255) ggTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTg < 2:2868744/100‑1 (MQ=255) ggTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTg < 2:1476940/100‑1 (MQ=255) ggTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTg < 2:1782051/100‑1 (MQ=255) ggTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGGGTGGTCGGGCACGAAAATGGCATAACGCTg > 1:2722629/1‑100 (MQ=255) gTACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGa > 1:209760/1‑100 (MQ=255) tACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGag > 1:1524333/1‑100 (MQ=255) tACGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGag < 1:1366926/100‑1 (MQ=255) aCGC‑TGG‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGagc < 1:1996988/100‑1 (MQ=255) | AAGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGC‑T‑G‑G‑GGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAGC > NC_000913/561591‑561784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |