BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1468681	NA (NA)	76 (1.140) +ACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGG	9/110	8.9	NA	noncoding (560/1331 nt)	IS2	repeat region
*	?	NC_000913	1650843 =	NA (NA)	76 (1.140) +ACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGG	9/110	8.9	NA	noncoding (1/706 nt)	IS2	repeat region
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 125 total aligned reads displayed.

AGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTT  >  NC_000913/1650745‑1650940

aGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTa                                                                                                  >  1:442667/1‑100 (MQ=255)

    cccTGAAAATTCAACCGGAAAAATCAGCCCGGTCATTGCTGCCATTCCTCGCGAATACAAGCAGACATGGACAACACTGGATGACGAACTGGCCTATggg                                                                                              <  1:895905/98‑1 (MQ=255)

    cacTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATggg                                                                                              <  1:2120850/100‑1 (MQ=255)

    cacTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATggg                                                                                              <  1:1261095/100‑1 (MQ=255)

    cacTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATggg                                                                                              <  2:2275354/100‑1 (MQ=255)

     acTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGgc                                                                                             >  2:2190700/1‑100 (MQ=255)

     acTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGgc                                                                                             >  1:686346/1‑100 (MQ=255)

      cTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGgcg                                                                                            >  1:1284294/1‑100 (MQ=255)

      cTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGgcg                                                                                            >  1:1896490/1‑100 (MQ=255)

       tGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGgcgc                                                                                           >  2:255089/1‑100 (MQ=255)

        gAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCgct                                                                                          <  1:224283/100‑1 (MQ=255)

        gAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCgct                                                                                          <  1:1873672/100‑1 (MQ=255)

         aaaaTTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCgctg                                                                                         <  1:1741424/100‑1 (MQ=255)

            aTTCAACAGGAAAAATCAGCCCGGTCATTGATGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCATATGGGCGCTGCtt                                                                                      >  2:1643194/1‑100 (MQ=255)

             ttCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTc                                                                                     <  1:1063069/100‑1 (MQ=255)

              tCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCg                                                                                    <  2:2233060/100‑1 (MQ=255)

              tCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCg                                                                                    <  2:1262632/100‑1 (MQ=255)

               cAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGc                                                                                   >  2:199845/1‑100 (MQ=255)

               cAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGc                                                                                   <  1:730932/100‑1 (MQ=255)

               cAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGc                                                                                   >  2:1853486/1‑100 (MQ=255)

               cAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGc                                                                                   <  1:2643289/100‑1 (MQ=255)

                aaCAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCa                                                                                  <  2:1826345/100‑1 (MQ=255)

                    ggAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACa                                                                              >  2:682503/1‑100 (MQ=255)

                    ggAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACa                                                                              >  1:51586/1‑100 (MQ=255)

                     gAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAg                                                                             <  1:567187/100‑1 (MQ=255)

                      aaaaaTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAgg                                                                            <  1:583721/100‑1 (MQ=255)

                      aaaaaTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAgg                                                                            <  2:1894316/100‑1 (MQ=255)

                       aaaaTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGc                                                                           <  1:199848/100‑1 (MQ=255)

                       aaaaTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGc                                                                           >  2:2021374/1‑100 (MQ=255)

                        aaaTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCa                                                                          <  2:1498524/100‑1 (MQ=255)

                        aaaTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCa                                                                          >  2:1380564/1‑100 (MQ=255)

                        aaaTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCa                                                                          <  1:2667764/100‑1 (MQ=255)

                          aTCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGa                                                                        >  1:52317/1‑100 (MQ=255)

                             aGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACt                                                                     <  1:2881708/100‑1 (MQ=255)

                              gCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCataccat                                                                    >  1:1071147/1‑94 (MQ=255)

                              gCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACtt                                                                    >  1:184239/1‑100 (MQ=255)

                               cccGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTg                                                                   >  2:783764/1‑100 (MQ=255)

                               cccGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTg                                                                   <  2:1215216/100‑1 (MQ=255)

                                 cGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGAt                                                                 <  2:167416/100‑1 (MQ=255)

                                 cGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGAt                                                                 <  1:796344/100‑1 (MQ=255)

                                  ggTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATg                                                                <  1:1886602/100‑1 (MQ=255)

                                  ggTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATg                                                                <  2:2037867/100‑1 (MQ=255)

                                  ggTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATg                                                                <  2:2570397/100‑1 (MQ=255)

                                  ggTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATg                                                                <  2:733967/100‑1 (MQ=255)

                                     cATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTa                                                             >  2:1352465/1‑100 (MQ=255)

                                     cATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTa                                                             >  2:1231594/1‑100 (MQ=255)

                                     cATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATAGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTa                                                             >  2:1983568/1‑100 (MQ=255)

                                        tgctgcCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGc                                                          <  1:135537/100‑1 (MQ=255)

                                         gctgcCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGTCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGc                                                          >  2:442069/1‑99 (MQ=255)

                                         gctgcCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGcc                                                         >  2:1275628/1‑100 (MQ=255)

                                           tgcCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGATGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTg                                                       <  2:2920005/100‑1 (MQ=255)

                                            gcCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGc                                                      >  2:1212367/1‑100 (MQ=255)

                                            gcCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATAGGCGCTGCTTCGCAGACAGGCAGAACTGGATGGTATGCCTGc                                                      <  2:582341/100‑1 (MQ=255)

                                             ccATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCg                                                     <  2:2105148/100‑1 (MQ=255)

                                                ttCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGAtn                                                  <  2:618653/100‑2 (MQ=255)

                                                 tCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCa                                                 <  2:311018/100‑1 (MQ=255)

                                                  cATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCaa                                                >  1:351318/1‑100 (MQ=255)

                                                    tCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATg                                              <  1:849760/100‑1 (MQ=255)

                                                    tCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATg                                              <  1:323906/100‑1 (MQ=255)

                                                     cgcgAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGc                                             >  1:2858120/1‑100 (MQ=255)

                                                     agataaTACAAGCAGAAATGGAAAACACTTGATGATGAACTGGCTTATGGGAGTTGCTTCGTAGACAGTCAGAATTTGATGGTATGCCTGCGATCAATg                                              <  2:1336746/95‑1 (MQ=18)

                                                      gcgAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                            <  1:2757380/100‑1 (MQ=255)

                                                      gcgAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                            >  2:2322232/1‑100 (MQ=255)

                                                      gcgAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                            <  1:620448/100‑1 (MQ=255)

                                                        gAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCaa                                          >  1:1850591/1‑100 (MQ=255)

                                                         aaTACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCaaa                                         <  1:682510/100‑1 (MQ=255)

                                                           tACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACg                                       >  1:1250788/1‑100 (MQ=255)

                                                             cAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgtg                                     <  2:1661630/100‑1 (MQ=255)

                                                               aGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGtt                                   >  2:2099622/1‑100 (MQ=255)

                                                                 cAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGtt                                   >  1:1779253/1‑98 (MQ=255)

                                                                   gACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAcc                               <  2:1832842/100‑1 (MQ=255)

                                                                   gACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCCATCAATGCAAAACGTGATTAcc                               >  2:542545/1‑100 (MQ=255)

                                                                     cATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCgg                             >  1:240603/1‑100 (MQ=255)

                                                                     cATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCgg                             <  1:2489573/100‑1 (MQ=255)

                                                                       tGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGAt                           >  1:1669913/1‑100 (MQ=255)

                                                                       tGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGAt                           >  1:1438564/1‑100 (MQ=255)

                                                                       tGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGAt                           >  1:2899495/1‑100 (MQ=255)

                                                                        ggAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATc                          <  2:845633/100‑1 (MQ=255)

                                                                        ggAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATc                          <  2:435088/100‑1 (MQ=255)

                                                                         gAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                         <  2:442663/100‑1 (MQ=255)

                                                                         gAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                         <  1:1001752/100‑1 (MQ=255)

                                                                           aaaCACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATg                       <  1:1719130/100‑1 (MQ=255)

                                                                           aaaCACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATg                       <  2:2554072/100‑1 (MQ=255)

                                                                              cacTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcgc                    >  2:908647/1‑100 (MQ=255)

                                                                                  ggATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGa                <  2:1896473/100‑1 (MQ=255)

                                                                                  ggATGACGAACTGGCCTATGGGCGCCGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGa                >  2:833100/1‑100 (MQ=255)

                                                                                    aTGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAAt              <  1:151468/100‑1 (MQ=255)

                                                                                      gACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgc            <  1:690259/100‑1 (MQ=255)

                                                                                       aCGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgcg           >  1:1916449/1‑100 (MQ=255)

                                                                                       aCGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgag           >  2:1843979/1‑98 (MQ=255)

                                                                                        cGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgcgc          >  1:629570/1‑100 (MQ=40)

                                                                                         gAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCt         >  2:35615/1‑100 (MQ=40)

                                                                                         gAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCt         >  2:1278461/1‑100 (MQ=40)

                                                                                         gAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCt         >  2:1173684/1‑100 (MQ=40)

                                                                                          aaCTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTg        >  2:125329/1‑100 (MQ=38)

                                                                                           aCTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGt       >  1:2731784/1‑100 (MQ=38)

                                                                                             tGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTg     <  2:1850575/100‑1 (MQ=35)

                                                                                              ggCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGc    <  1:783771/100‑1 (MQ=33)

                                                                                                ccTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCtt  >  2:3027105/1‑100 (MQ=31)

                                                                                                ccTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCtt  >  2:2589291/1‑100 (MQ=31)

AGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTT  >  NC_000913/1650745‑1650940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.