| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,017 | 0 | C | T | 31.3% | 329.1 / 163.8 | 213 | intergenic (‑227/+81) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (67/67); new base T (60/1); total (144/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.95e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
Only 100 of 215 total aligned reads displayed.
GCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGT > NC_000913/3705918‑3706114 | cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTg > 2:465919/1‑100 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTg > 2:3006490/1‑100 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGc < 1:1359974/100‑1 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCTCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGACCTAC‑AAAATCGTGCAAATTCAATACATTGc < 2:1137404/98‑1 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGTAAATTCAATACATTGCA‑g < 1:661341/100‑1 (MQ=255) gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑Ga < 2:2580960/100‑1 (MQ=255) ggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑Ga‑a > 1:792665/1‑100 (MQ=255) gTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At < 2:816131/100‑1 (MQ=255) ntaCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGACCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑tt > 2:1656929/2‑100 (MQ=255) ataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑tt > 1:582416/1‑100 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑tt‑‑‑t < 1:2824942/100‑1 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑Tc < 2:476873/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAgg < 1:2576750/100‑1 (MQ=255) tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGc > 2:1267205/1‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGa > 2:1433147/1‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGa > 1:23376/1‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGa < 1:575699/100‑1 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGAt > 1:715506/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATa < 2:358458/100‑1 (MQ=255) aaaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATaa > 1:919992/1‑100 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGc > 2:1145561/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCg < 2:1483982/100‑1 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCg > 2:1636103/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGa > 1:769878/1‑100 (MQ=255) ncTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgc > 1:2018889/2‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgc > 1:804200/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgcg < 2:311916/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgcg < 2:578073/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgcg < 1:1122282/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgcg > 1:1461731/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgcg > 1:2441741/1‑100 (MQ=255) tttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑CA‑‑‑T‑‑‑GTAGGCCTGATAAGCGTAgcgc > 1:1794836/10‑100 (MQ=18) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTCCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAgcgc < 1:1510908/100‑1 (MQ=255) ttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CC‑‑‑TC‑‑GTAGGCCTGATAAGCGTAGCGCa > 1:602934/9‑100 (MQ=18) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGAT‑CA‑‑‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCAt > 1:2353187/8‑100 (MQ=17) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 2:1622741/100‑1 (MQ=255) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GG‑CT‑CC‑‑‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:2779604/4‑100 (MQ=21) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGTTCGTGCAAATTCAATAAATTGCA‑‑A‑TA‑TG‑‑‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1399973/4‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCCC‑‑‑TT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1546451/3‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TC‑‑‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:1255125/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GG‑AC‑CA‑‑‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:856168/3‑100 (MQ=18) ggtcggataaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGCAGGA‑AC‑GA‑‑‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa < 1:525882/90‑1 (MQ=21) ggctggataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGCA‑CA‑GC‑TA‑‑‑GC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:189451/11‑100 (MQ=25) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GA‑AA‑CC‑‑‑TT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2344358/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GA‑AA‑CC‑‑‑TT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2546412/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TC‑‑‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:366627/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAATGTGCAAATTCAATAAATTGC‑‑‑A‑AT‑TCAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGc > 2:494779/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑AT‑‑‑TG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCa > 1:944018/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGCA‑AT‑CT‑CC‑‑‑GT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2946719/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑A‑AT‑CT‑‑‑CCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2050703/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GG‑AA‑AC‑‑‑AC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCa > 1:493374/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑TT‑‑‑AT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:1178203/2‑100 (MQ=21) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt < 2:2670219/100‑1 (MQ=255) gCCGGATGCGGCGATAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TC‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGACa > 2:667640/1‑99 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑AT‑‑‑TG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 1:3034754/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CC‑‑‑TC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2927051/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑TT‑‑‑AT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 2:1281867/1‑100 (MQ=21) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑A‑AT‑CT‑‑‑CCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 1:2206618/9‑98 (MQ=18) ccggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:2484979/9‑100 (MQ=18) caggataaggcgTTCACGCCTTATCCTGCCTAC‑AAAAGCACGCAAATTCAATATATTGCA‑GA‑GA‑TG‑‑‑GC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:2759267/9‑100 (MQ=14) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CC‑‑‑TC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 1:2384252/8‑97 (MQ=21) cggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑TT‑‑‑AT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAttta > 2:770288/8‑99 (MQ=21) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TC‑‑‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:393530/7‑100 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TC‑‑‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:843012/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑CT‑‑‑GC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:552389/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GG‑GA‑CT‑‑‑AT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 1:1650576/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GA‑GA‑TT‑‑‑AT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 2:2913916/7‑96 (MQ=17) ggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt > 1:1867700/7‑100 (MQ=18) gataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCA‑TG‑GG‑CC‑‑‑AT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAatttt > 1:352443/6‑100 (MQ=17) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑AT‑‑‑TG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatctt > 2:1867264/6‑95 (MQ=25) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GG‑GA‑CT‑‑‑AT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagcttt > 2:1340591/6‑95 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAACACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGTCATTtttg < 2:603550/100‑1 (MQ=255) taaggcgTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GG‑CT‑CC‑‑‑AC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttgc > 1:1130765/4‑100 (MQ=18) taaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑TA‑‑‑T‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctttac > 1:1623825/4‑93 (MQ=21) ggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑TA‑‑‑T‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAATtttgcgtt > 1:2113271/1‑97 (MQ=17) ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt > 1:983734/1‑100 (MQ=255) tAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa > 1:2740386/1‑100 (MQ=255) tAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 2:226733/100‑1 (MQ=255) cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAtac < 2:1448560/100‑3 (MQ=255) cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa > 1:2969477/1‑100 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTttttcttttttttttag > 2:1062233/1‑91 (MQ=18) ccGGCCTAT‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 1:2836218/1‑100 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 1:1701931/1‑100 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg < 2:2181151/100‑1 (MQ=255) cTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCt > 2:2090293/1‑100 (MQ=255) cTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCt > 2:43908/1‑100 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:15807/1‑100 (MQ=255) c‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt < 1:1325530/100‑1 (MQ=255) gaaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 2:2437148/99‑1 (MQ=255) aaaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 2:191995/100‑1 (MQ=255) aaaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 1:1814020/100‑1 (MQ=255) aaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTaa < 2:2396108/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑CT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTGTa < 2:855359/98‑1 (MQ=255) aaaTTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 1:2852497/100‑1 (MQ=255) ttCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga < 2:251794/100‑1 (MQ=255) tCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:1753750/100‑1 (MQ=255) tCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 1:629218/100‑1 (MQ=255) cAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga > 1:1987479/1‑100 (MQ=255) cAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 1:1023507/100‑1 (MQ=255) tACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGt > 1:686296/1‑100 (MQ=255) | GCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TT‑‑‑TC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGT > NC_000913/3705918‑3706114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |