Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,981,1020TA21.4% 200.9 / 56.9 98V72V (GTT→GTA) yifKputative APC family amino acid transporter
Reads supporting (aligned to +/- strand):  ref base T (38/39);  new base A (14/7);  total (52/46)
Fisher's exact test for biased strand distribution p-value = 2.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.19e-01

Only 100 of 109 total aligned reads displayed.

GGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTGGGG  >  NC_000913/3981006‑3981198
                                                                                                |                                                                                                
ggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttacc                                                                                               >  1:863391/1‑100 (MQ=255)
ggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttacc                                                                                               <  2:265202/100‑1 (MQ=255)
ggccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttacc                                                                                               <  1:2195692/100‑1 (MQ=255)
 gccgggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAaccggttaccg                                                                                              >  1:291022/1‑100 (MQ=255)
     ggccATCCGTATTGTTGGCCTATATCATCGCCGGGCTATTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttc                                                                                          <  2:181893/100‑1 (MQ=255)
      ttccgatctATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcg                                                                                         <  1:2280152/92‑1 (MQ=255)
      gccATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcg                                                                                         <  1:2601098/100‑1 (MQ=255)
       ccATCCGTTTTTTTGGCCTTTATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAAGGGGCGAAATGTTGTCCCTCGAACCGGTAACCGgttcga                                                                                        <  2:539544/100‑2 (MQ=255)
        cATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgtt                                                                                       >  2:2536523/1‑100 (MQ=255)
        cATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTAACCGgttcgag                                                                                       <  2:649613/100‑3 (MQ=255)
        cATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTAACCGgttcgag                                                                                       <  1:5306/100‑3 (MQ=255)
         aTCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgttc                                                                                      <  2:891847/100‑1 (MQ=255)
         aTCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgttc                                                                                      <  1:2650127/100‑1 (MQ=255)
         aTCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTAACCGgttcg                                                                                         <  2:1983978/97‑1 (MQ=255)
          tCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGttcgttcg                                                                                     <  2:871925/100‑1 (MQ=255)
          tCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGttcgttcg                                                                                     >  1:912552/1‑100 (MQ=255)
          tCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCACGAACCGGTAACCGgttcgagga                                                                                     <  2:357390/100‑5 (MQ=255)
            cGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTAACCGgttcgaggaac                                                                                   <  1:2304488/100‑7 (MQ=255)
               aTTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGgttcgagatcggaa                                                                                >  2:2280132/1‑91 (MQ=255)
               aTTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGtt                                                                                <  1:1239130/100‑1 (MQ=255)
                ttgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCGCGAACCGGTTACCGGTTCGTTCGCCGttt                                                                               <  2:2749480/100‑1 (MQ=255)
                 tgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTa                                                                              <  2:194628/100‑1 (MQ=255)
                 tgttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTa                                                                              <  2:195109/100‑1 (MQ=255)
                  gttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATTATTTTTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTAt                                                                             >  2:1435933/1‑100 (MQ=255)
                   ttgGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATg                                                                            >  1:1829386/1‑100 (MQ=255)
                     ggCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATgcg                                                                          >  2:956156/1‑100 (MQ=255)
                       ccTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCa                                                                        <  1:608298/100‑1 (MQ=255)
                         tataTCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATc                                                                      >  2:2443274/1‑100 (MQ=255)
                          atatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCg                                                                     >  2:1251961/1‑100 (MQ=255)
                          atatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCg                                                                     <  1:2768620/100‑1 (MQ=255)
                           tatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGt                                                                    <  1:2455561/100‑1 (MQ=255)
                           tatCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGt                                                                    <  2:2196868/100‑1 (MQ=255)
                            atcatcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGCCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGtt                                                                   <  2:1942527/100‑1 (MQ=255)
                               atcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTtata                                                                <  2:585566/100‑1 (MQ=255)
                                tcGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTatat                                                               <  2:1789980/100‑1 (MQ=255)
                                     gggCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGcc                                                          <  2:2430635/100‑1 (MQ=255)
                                        cTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCg                                                        >  2:2757146/1‑99 (MQ=255)
                                        cTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGt                                                       <  1:1946131/100‑1 (MQ=255)
                                          gTTCGTCTTTTTCTTTTTTTTTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTc                                                     >  2:107130/1‑100 (MQ=255)
                                          gTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTc                                                     >  2:890231/1‑100 (MQ=255)
                                           ttCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCt                                                    >  2:3006282/1‑100 (MQ=255)
                                           ttCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCt                                                    >  2:359446/1‑100 (MQ=255)
                                            tCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCtt                                                   >  2:174695/1‑100 (MQ=255)
                                             cGTCTTTTTCATCATGTGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCAGTTTATGCGCATCGTTATATGAGCCCGTTCttt                                                  >  2:2471879/1‑100 (MQ=255)
                                             cGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCttt                                                  >  2:658826/1‑100 (MQ=255)
                                              gTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTg                                                 <  1:1202035/100‑1 (MQ=255)
                                              gTCTTTTTCATCATGCGTTCAATGCGCGAAATGTTTTCCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTg                                                 <  1:1510836/100‑1 (MQ=255)
                                                cTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGc                                               <  2:679584/100‑1 (MQ=255)
                                                cTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGc                                               <  1:931130/100‑1 (MQ=255)
                                                cTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGc                                               <  1:2433197/100‑1 (MQ=255)
                                                cTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGc                                               <  2:573512/100‑1 (MQ=255)
                                                 tttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCt                                              <  2:1061432/100‑1 (MQ=255)
                                                  ttttCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTa                                             <  1:1251972/100‑1 (MQ=255)
                                                         catGCGTTCAATGGGCGAAATGTTGTTCCTCGACCCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCAcc                                      <  1:1357714/100‑1 (MQ=255)
                                                           tGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGc                                    >  2:1588637/1‑100 (MQ=255)
                                                             cGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCt                                  >  1:1149718/1‑100 (MQ=255)
                                                             cGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCt                                  >  2:2485607/1‑100 (MQ=255)
                                                             cGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCt                                  >  1:3016965/1‑100 (MQ=255)
                                                              gTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTTCCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTg                                 >  2:580153/1‑100 (MQ=255)
                                                               ttCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTgg                                <  1:247457/100‑1 (MQ=255)
                                                                 cAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATCAGCCCGTTCTTTGGCTATCTCACCGCCTGGTc                              >  2:2129041/1‑100 (MQ=255)
                                                                  aaTGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCt                             >  2:957595/1‑100 (MQ=255)
                                                                    ngggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCtg                            >  2:1841312/2‑98 (MQ=255)
                                                                      ggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt                         >  1:545084/1‑100 (MQ=255)
                                                                      ggCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACt                         <  1:400049/100‑1 (MQ=255)
                                                                       gCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTg                        >  1:2123251/1‑100 (MQ=255)
                                                                         gAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGt                      <  2:2080804/100‑1 (MQ=255)
                                                                         gAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGt                      >  2:1748136/1‑100 (MQ=255)
                                                                          aaaTGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGtt                     <  2:1643464/100‑1 (MQ=255)
                                                                               ttgttCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTAtgt                <  1:2849104/100‑1 (MQ=255)
                                                                               ttgttCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTAtgt                <  1:956165/100‑1 (MQ=255)
                                                                                tgttCCTCGAACCGGTTACCGGTTCGTTCACCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTAtgtg               >  2:1508676/1‑100 (MQ=255)
                                                                                  gcgaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGa             >  2:1243972/6‑100 (MQ=255)
                                                                                  gcgaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGa             >  1:2632753/6‑100 (MQ=255)
                                                                                   cgaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGAt            >  1:2594468/5‑100 (MQ=255)
                                                                                    gaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATg           >  2:1929535/4‑100 (MQ=255)
                                                                                    gaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATg           >  1:2347522/4‑100 (MQ=255)
                                                                                    gaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATg           >  1:2540050/4‑100 (MQ=255)
                                                                                    gaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATg           >  1:2753081/4‑100 (MQ=255)
                                                                                    gaacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATg           >  1:668836/4‑100 (MQ=255)
                                                                                    ccTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATg           <  2:2000608/100‑1 (MQ=255)
                                                                                     cTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATgg          >  1:530474/1‑100 (MQ=255)
                                                                                     cTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATgg          >  2:655754/1‑100 (MQ=255)
                                                                                     cTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATgg          >  1:2441861/1‑100 (MQ=255)
                                                                                     aacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATgg          >  1:358124/3‑100 (MQ=255)
                                                                                     aacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATgg          >  2:818801/3‑100 (MQ=255)
                                                                                     aacGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATg           >  2:2497364/3‑99 (MQ=255)
                                                                                      tCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGc         <  1:894023/100‑1 (MQ=255)
                                                                                      acGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGc         >  1:1222910/2‑100 (MQ=255)
                                                                                      acGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGc         >  1:143827/2‑100 (MQ=255)
                                                                                       cGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCg        >  1:1732936/1‑100 (MQ=255)
                                                                                       cGAACCGGTAACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCg        >  1:1577846/1‑100 (MQ=255)
                                                                                        gAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCgg       >  2:964330/1‑100 (MQ=255)
                                                                                        gAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCgg       >  1:283403/1‑100 (MQ=255)
                                                                                           ccggttaccggttCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTgg    <  1:2443296/100‑1 (MQ=255)
                                                                                            cggttaccggttCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTggg   <  1:1588651/100‑1 (MQ=255)
                                                                                            cggttaccggttCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTggg   <  1:541849/100‑1 (MQ=255)
                                                                                             ggttaccggttCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCGCCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTgggg  <  2:1868293/100‑1 (MQ=255)
                                                                                             ggttaccggttCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTgggg  <  2:188114/100‑1 (MQ=255)
                                                                                             ggttaccggttCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTgggg  >  2:1238126/1‑100 (MQ=255)
                                                                                                |                                                                                                
GGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTGGGG  >  NC_000913/3981006‑3981198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑