| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,196,250 | T→C | intergenic (‑151/+82) | thiC ← / ← rsd | phosphomethylpyrimidine synthase/stationary phase protein, binds sigma 70 RNA polymerase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,196,250 | 0 | T | C | 97.0% | 445.2 / ‑0.3 | 132 | intergenic (‑151/+82) | thiC/rsd | phosphomethylpyrimidine synthase/stationary phase protein, binds sigma 70 RNA polymerase subunit |
| Reads supporting (aligned to +/- strand): ref base T (3/1); new base C (75/53); total (78/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 133 total aligned reads displayed.
AGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTT > NC_000913/4196153‑4196346 | agaCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCa > 1:1321174/1‑100 (MQ=255) gaCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAg > 1:1526345/1‑100 (MQ=255) aCGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAATGGTCCCAGc < 1:2064519/100‑1 (MQ=255) cGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGcc < 2:948410/100‑1 (MQ=255) cGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGcc > 2:1237849/1‑100 (MQ=255) cGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGcc > 2:1820428/1‑100 (MQ=255) gATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCa < 2:1708191/100‑1 (MQ=255) tCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGt > 1:1309053/1‑100 (MQ=255) gccgcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTa < 2:2621928/100‑1 (MQ=255) ccgcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTaa > 1:2242467/1‑100 (MQ=255) cgcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAg < 1:399862/100‑1 (MQ=255) cgcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAg > 1:1499555/1‑100 (MQ=255) gcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAgg > 2:2170290/1‑100 (MQ=255) gcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAgg < 1:9428/100‑1 (MQ=255) gcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAgg < 1:2282672/100‑1 (MQ=255) gcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAgg < 2:620726/100‑1 (MQ=255) gcAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAgg > 1:1614169/1‑100 (MQ=255) cAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGc < 2:2016899/100‑1 (MQ=255) ggggCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCAc < 2:1862777/100‑1 (MQ=255) gcgatgcgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTcc < 2:2340536/100‑1 (MQ=255) gcgatgcgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTcc < 1:1737344/100‑1 (MQ=255) gcgatgcgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTcc < 2:1526332/100‑1 (MQ=255) atgcgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGAc < 2:1579754/100‑1 (MQ=255) tgcgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACa < 1:280010/100‑1 (MQ=255) cgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAg > 2:345560/1‑100 (MQ=255) cgatAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAg > 1:147589/1‑100 (MQ=255) atAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGaa > 2:836267/1‑100 (MQ=255) atAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGaa > 1:2246816/1‑100 (MQ=255) gCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAAtt > 1:2261783/1‑100 (MQ=255) gCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAAtt > 2:2022261/1‑100 (MQ=255) gCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAAtt < 1:1333659/100‑1 (MQ=255) gCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAAtt > 1:916197/1‑100 (MQ=255) cAGATTAACTCTTGTTCCCTTCGCAGGTATTATCCTGATAAGCTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTa < 2:2126408/100‑1 (MQ=255) cAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTa > 2:515842/1‑100 (MQ=255) aGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAg < 2:1349098/100‑1 (MQ=255) aGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAg > 1:2789412/1‑100 (MQ=255) aGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAg < 2:775320/100‑1 (MQ=255) gATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGc > 1:1128400/1‑100 (MQ=255) gATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGc > 1:2197469/1‑100 (MQ=255) tAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGcccc < 2:2180722/100‑1 (MQ=255) aaCTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCg < 2:916189/100‑1 (MQ=255) aaCTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCg > 1:450439/1‑100 (MQ=255) aCTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGc < 2:280399/100‑1 (MQ=255) ctctTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTACCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCa > 1:2134229/1‑100 (MQ=255) tctTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCaa > 1:2934484/1‑100 (MQ=255) ctTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCaaa > 1:749914/1‑100 (MQ=255) ctTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCaaa > 2:1104726/1‑100 (MQ=255) tGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATg > 1:459450/1‑100 (MQ=255) gTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATgg > 2:590643/1‑100 (MQ=255) gTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATgg > 1:669663/1‑100 (MQ=255) cccTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGc > 1:2095852/1‑100 (MQ=255) cccTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGc > 2:2865027/1‑100 (MQ=255) ccTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCa > 2:392867/1‑100 (MQ=255) cTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCAt > 1:1232303/1‑100 (MQ=255) cTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCAt < 1:1766391/100‑1 (MQ=255) tCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTg < 1:2169369/100‑1 (MQ=255) gCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGaa < 1:1920577/100‑1 (MQ=255) gCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGaa < 1:66654/100‑1 (MQ=255) gCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGaa < 1:761221/100‑1 (MQ=255) ggTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGt > 2:2071333/1‑100 (MQ=255) gTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTa > 2:2877386/1‑100 (MQ=255) gTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATCGGGCATTGAATGTa > 2:2064414/1‑100 (MQ=255) tATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTaa > 1:789468/1‑100 (MQ=255) ttAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAAt < 1:680785/100‑1 (MQ=255) tAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAAtt > 2:279246/1‑100 (MQ=255) aGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTa > 1:2526890/1‑100 (MQ=255) aGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTa > 2:2915661/1‑100 (MQ=255) aGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTa > 1:828767/1‑100 (MQ=255) gCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTAc < 1:185307/100‑1 (MQ=255) gCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTAc > 1:1386000/1‑100 (MQ=255) gCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTAc > 2:2248719/1‑100 (MQ=255) cTGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTAcgc > 1:2657116/1‑100 (MQ=255) cTGATCAGGTTCCGCGGATCCCGAATAAACGGACCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTAcgc > 1:2874479/1‑100 (MQ=255) tGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTAcgcg < 1:2794675/100‑1 (MQ=255) tGATCAGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTAcgcg > 1:886289/1‑100 (MQ=255) aGGTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAAc < 2:975219/100‑1 (MQ=255) ggTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACa > 2:2434842/1‑100 (MQ=255) ggTTCCGCGGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACa > 2:378850/1‑100 (MQ=255) cgcgGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCa > 2:2172646/1‑100 (MQ=255) cgcgGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCa > 2:1383040/1‑100 (MQ=255) cgcgGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCa < 1:1424772/100‑1 (MQ=255) cgcgGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCa > 2:114059/1‑100 (MQ=255) cgcgGATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCa > 1:2222501/1‑100 (MQ=255) gATCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAc < 2:1499543/100‑1 (MQ=255) aTCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACt < 1:2064433/100‑1 (MQ=255) tCCCGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTc > 2:836215/1‑100 (MQ=255) ccGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCTGAACTCaa > 1:2593179/1‑100 (MQ=255) cGAATAAACGGTCCCAGCCAGTTAAGGCACTCCTACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAg > 2:2001188/1‑100 (MQ=255) cGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAg < 2:95157/100‑1 (MQ=255) cGAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAg < 1:1102761/100‑1 (MQ=255) gAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGc > 2:1132082/1‑100 (MQ=255) gAATAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGc < 2:902646/100‑1 (MQ=255) aaTAAACGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGTATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCa < 1:2143642/100‑1 (MQ=255) aaaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGa > 1:2912230/1‑100 (MQ=255) aCGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATg < 2:907844/100‑1 (MQ=255) cGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGt > 1:1901639/1‑100 (MQ=255) cGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGt > 1:1387636/1‑100 (MQ=255) cGGTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGt < 1:117124/100‑1 (MQ=255) ggTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGtt < 1:836274/100‑1 (MQ=255) gTCCCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGttt > 2:1351501/1‑100 (MQ=255) | AGACGATCGCCGCAGGGGCGATGCGATAGCAGATTAACTCTTGTTCCCTTCGCAGGTATTAGCCTGATCAGGTTCCGCGGATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTT > NC_000913/4196153‑4196346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |