| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,356,549 | C→T | A188T (GCT→ACT) | sapA ← | antimicrobial peptide transport ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,356,549 | 0 | C | T | 95.7% | 350.3 / 4.0 | 117 | A188T (GCT→ACT) | sapA | antimicrobial peptide transport ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (4/1); new base T (62/50); total (66/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.23e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
ACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGCATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACGTTATC > NC_000913/1356453‑1356648 | aCTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGtata > 1:2114245/1‑100 (MQ=255) cTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATaa > 1:2358848/1‑100 (MQ=255) cTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATaa > 2:2948572/1‑100 (MQ=255) tGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAAt < 1:1827004/100‑1 (MQ=255) aTACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATgg < 2:2064751/100‑1 (MQ=255) aTACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATgg < 1:1395918/100‑1 (MQ=255) tACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATggg < 1:2948598/100‑1 (MQ=255) cGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACAGGACCGAAGTATAATGGGtt > 2:2802182/1‑100 (MQ=255) ggACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTg < 2:518376/100‑1 (MQ=255) aCCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCg < 1:1036081/100‑1 (MQ=255) aCCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCg < 2:1736388/100‑1 (MQ=255) ggTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAgg < 1:2854969/100‑1 (MQ=255) ggTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAgg > 2:2378248/1‑100 (MQ=255) tGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTg > 2:841051/1‑100 (MQ=255) tGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTg > 1:118942/1‑100 (MQ=255) gCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGc < 2:2483262/100‑1 (MQ=255) ccGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGcc > 1:923079/1‑100 (MQ=255) cGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCca < 1:293133/100‑1 (MQ=255) gACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCcan < 2:2194016/100‑2 (MQ=255) aCCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCcaca < 1:1327563/100‑1 (MQ=255) gTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACaaaaa < 1:270172/100‑1 (MQ=255) ttGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAGTGGGTTGCGAGGTGCCACaaaaaa < 1:2228570/100‑1 (MQ=255) tGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaag > 2:1949926/1‑100 (MQ=255) tGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaag < 1:495625/100‑1 (MQ=255) tGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaag < 1:472412/100‑1 (MQ=255) gACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaaga < 2:2017596/100‑1 (MQ=255) gACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaaga > 1:731405/1‑100 (MQ=255) cGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaagaag < 1:2471689/100‑1 (MQ=255) cGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaagaag > 2:1490473/1‑100 (MQ=255) cGGTCGAGTTGCTCCTGGCGATCTTCTGTCTCTAACTTCCAGCCATATTCTGCCAACAAGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAaagaat < 2:2006129/100‑2 (MQ=255) gTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCa > 1:1024341/1‑100 (MQ=255) gAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATcc > 2:2295247/1‑100 (MQ=255) aGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCg > 2:2741215/1‑100 (MQ=255) gTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGCCCGAAGCATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCgg > 1:851173/1‑100 (MQ=255) ttGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGc < 2:1259158/100‑1 (MQ=255) tGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCt > 1:1324019/1‑100 (MQ=255) tGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCt > 2:2544334/1‑100 (MQ=255) gCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCTGGCTg > 2:75988/1‑100 (MQ=255) gCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTg < 1:1291351/100‑1 (MQ=255) ccTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTgggn < 2:2092292/100‑2 (MQ=255) ccTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGc > 2:2474206/1‑100 (MQ=255) ccTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGc < 2:209557/100‑1 (MQ=255) ccTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGc > 1:411661/1‑100 (MQ=255) ccTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGc < 1:1368764/100‑1 (MQ=255) cGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTc > 2:2609987/1‑100 (MQ=255) gATCTTCTTTCTCTAACTTCCGTGCATAATCTGCCGACATGACCGAAGTATAATGGGTTGCGAAGAGCAAAAAAAAAGAAGCATCCGGCTGGGc < 2:2714567/94‑1 (MQ=255) tcttctTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGa < 2:2358827/100‑1 (MQ=255) tctttctCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACt < 2:2139555/100‑1 (MQ=255) tctcTAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAAc > 1:565320/1‑100 (MQ=255) ctctAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACg > 1:577293/1‑100 (MQ=255) ctctAACTTCCGGGCATATTCTGCCGACATGACCGAAGCATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACg < 2:851165/100‑1 (MQ=255) tctAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACgg < 2:1324006/100‑1 (MQ=255) ctAACTTCCGGGCATATTCTGCCGACATGACCGGAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGt > 2:2435326/1‑100 (MQ=255) ctAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGt < 2:980679/100‑1 (MQ=255) ctAACTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGt > 1:410596/1‑100 (MQ=255) aaCTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTAt < 2:1501737/100‑1 (MQ=255) aaCTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTAt > 2:2455213/1‑100 (MQ=255) aaCTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTAt < 1:2550096/100‑1 (MQ=255) aaCTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTAt > 2:500901/1‑100 (MQ=255) aaCTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTAt > 2:1199413/1‑100 (MQ=255) aaCTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTAt < 1:168688/100‑1 (MQ=255) aCTTCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGGGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATg > 2:1503795/1‑100 (MQ=255) cTTCCGGGCATATTCTGCCGACATGACCGAAGCATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGa > 1:2780092/1‑100 (MQ=255) tCCGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGAtt < 2:2674530/100‑1 (MQ=255) cGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGCGTCGGAACTCAACGGTATGATTAt > 1:589647/1‑100 (MQ=255) cGGGCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTAt > 2:1482662/1‑100 (MQ=255) gCATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCa > 2:553030/1‑100 (MQ=255) cATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAg > 1:754090/1‑100 (MQ=255) cATATTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAg > 1:2463356/1‑100 (MQ=255) tatTCTGCCGACATGACCGAAGTATACTGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGtt > 1:1843459/1‑100 (MQ=255) tatTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGtt < 1:2728337/100‑1 (MQ=255) atTCTGCCGACATGACCGAAGTATAATGGGTTGCTAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGCTTATCCAGttt < 2:1596937/100‑1 (MQ=255) atTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGttt > 2:451857/1‑100 (MQ=255) atTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGttt > 2:917353/1‑100 (MQ=255) atTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGttt > 2:2222528/1‑100 (MQ=255) atTCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGttt > 1:2893814/1‑100 (MQ=255) atTCTGCCGACATGACCGAAGCATAATGGGTTGCGAGGGGCCACCAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGtt > 2:2579406/1‑99 (MQ=255) tCTGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGc < 1:104662/100‑1 (MQ=255) tGCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCgg > 2:2820640/1‑100 (MQ=255) gCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGa > 2:236221/1‑100 (MQ=255) gCCGACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGa > 1:2173551/1‑100 (MQ=255) ccGACATGACCGAAGCATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGAc > 1:1839464/1‑100 (MQ=255) gACATGACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGc > 2:2591478/1‑100 (MQ=255) aCATGACTGCAGTATACTGGGTTGCGAGGTGATAAAACAATGAAGCAGCCTGCTGGGCGACTCGGAACTCAACGGTATGATTTTCCTGTTTGc < 2:1767515/93‑1 (MQ=255) gACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTc > 2:245947/1‑100 (MQ=255) gACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTc > 1:1579826/1‑100 (MQ=255) gACCGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTc > 2:1057186/1‑100 (MQ=255) ccGAAGTATAATGGGTTGCGAGGTGCCACACAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCAc > 2:2077254/1‑100 (MQ=255) ccGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCttctttt > 1:1052680/1‑95 (MQ=255) ccGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCAc > 1:404759/1‑100 (MQ=255) ccGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCAc > 1:4047/1‑100 (MQ=255) ccGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCAc > 2:1322476/1‑100 (MQ=255) ccGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCAc > 1:1122657/1‑100 (MQ=255) cGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACg > 1:411889/1‑100 (MQ=255) cGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACg < 1:523256/100‑1 (MQ=255) cGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACg < 1:3028304/100‑1 (MQ=255) cGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACg < 1:2799875/100‑1 (MQ=255) cGAAGTATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACg > 2:1340220/1‑100 (MQ=255) gAAGTATAATGGGTTGCGAGGTGCAACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCAc < 2:558621/98‑1 (MQ=255) cATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACGTTATc > 2:2586488/1‑100 (MQ=255) | ACTGATACGGACCGGTGCCGACCGGTTGACGGTCGAGTTGCTCCTGGCGATCTTCTTTCTCTAACTTCCGGGCATATTCTGCCGACATGACCGAAGCATAATGGGTTGCGAGGTGCCACAAAAAAGAAGCATCCGGCTGGGCGAGTCGGAACTCAACGGTATGATTATCCAGTTTGCGGACGCTTTTCACGTTATC > NC_000913/1356453‑1356648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |