Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,360,729 G→T S60R (AGC→AGA puuA ← glutamate‑‑putrescine ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,360,7290GT98.4% 412.2 / ‑1.2 123S60R (AGC→AGApuuAglutamate‑‑putrescine ligase
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base T (55/65);  total (56/67)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.32e-01

Only 100 of 123 total aligned reads displayed.

TTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGGCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTAGCG  >  NC_000913/1360632‑1360824
                                                                                                 |                                                                                               
tttCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCt                                                                                               <  1:1139216/100‑1 (MQ=255)
  tCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCttn                                                                                             <  2:2695476/100‑2 (MQ=255)
  tCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTg                                                                                             <  2:1807630/100‑1 (MQ=255)
  tCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTg                                                                                             <  2:2989992/100‑1 (MQ=255)
   ccTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGa                                                                                            >  2:1490904/1‑100 (MQ=255)
   ccTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGa                                                                                            >  2:2887028/1‑100 (MQ=255)
    cTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATACCACCCTTTCTCGAGCTTCTTCAGTCTTGa                                                                                            >  2:2878325/1‑99 (MQ=255)
    cTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGaa                                                                                           <  2:274256/100‑1 (MQ=255)
     tGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGaaa                                                                                          >  1:2807819/1‑100 (MQ=255)
      gACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAAc                                                                                         >  2:498102/1‑100 (MQ=255)
        cccAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACan                                                                                       <  1:222259/100‑2 (MQ=255)
        cccAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAg                                                                                       <  2:2742817/100‑1 (MQ=255)
          cAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGa                                                                                     >  2:2949080/1‑100 (MQ=255)
          cAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGa                                                                                     >  1:1956149/1‑100 (MQ=255)
           aGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGGAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGaa                                                                                    >  2:1791767/1‑100 (MQ=255)
              ccTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATAc                                                                                 <  1:2613531/100‑1 (MQ=255)
                    tcttctACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTc                                                                           >  1:1185874/1‑100 (MQ=255)
                     cttctACTACGTTGCCCAGAATATCCAGTGCAAATACCTAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTcc                                                                          <  1:249379/100‑1 (MQ=255)
                      ttctACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCa                                                                         <  1:654038/100‑1 (MQ=255)
                      ttctACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCa                                                                         >  1:2738255/1‑100 (MQ=255)
                         tactacGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACgg                                                                      >  1:2538138/1‑100 (MQ=255)
                          actacGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGa                                                                     <  1:1859899/100‑1 (MQ=255)
                          actacGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGa                                                                     <  1:893941/100‑1 (MQ=255)
                          actacGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGa                                                                     <  2:1574743/100‑1 (MQ=255)
                           ctacGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGaa                                                                    >  2:1801361/1‑100 (MQ=255)
                           ctacGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGaa                                                                    <  2:2335265/100‑1 (MQ=255)
                            tacGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAg                                                                   >  2:1398291/1‑100 (MQ=255)
                             acGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGc                                                                  <  1:764229/100‑1 (MQ=255)
                             acGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCCAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGc                                                                  >  2:1938904/1‑100 (MQ=255)
                              cGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCa                                                                 <  1:2887054/100‑1 (MQ=255)
                                 tGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAAcc                                                              >  1:2302486/1‑100 (MQ=255)
                                  gCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCa                                                             >  1:3034469/1‑100 (MQ=255)
                                  gCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCa                                                             >  1:1288918/1‑100 (MQ=255)
                                   cccAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCAt                                                            >  2:529836/1‑100 (MQ=255)
                                   cccAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCAt                                                            >  2:1574740/1‑100 (MQ=255)
                                   cccAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCAt                                                            >  1:1938962/1‑100 (MQ=255)
                                     cAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCAttt                                                          >  1:1259623/1‑100 (MQ=255)
                                      aGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTa                                                         <  1:2103611/100‑1 (MQ=255)
                                      aGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTa                                                         <  2:1676574/100‑1 (MQ=255)
                                       gAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTa                                                         <  1:790220/99‑1 (MQ=255)
                                        aaTATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTaaa                                                       <  1:1846287/100‑1 (MQ=255)
                                        aaTATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTaaa                                                       <  2:1733437/100‑1 (MQ=255)
                                          tatCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCCCGGAAGCAACCATTTAAATc                                                     <  2:1859635/100‑1 (MQ=255)
                                          tatCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATc                                                     >  2:3018990/1‑100 (MQ=255)
                                           atCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCg                                                    <  1:132583/100‑1 (MQ=255)
                                            tCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCgg                                                   <  1:2567823/100‑1 (MQ=255)
                                             ccATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgt                                                  <  2:1722331/100‑1 (MQ=255)
                                              cATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgta                                                 >  1:1038751/1‑100 (MQ=255)
                                               aTTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaa                                                >  1:3025224/1‑100 (MQ=255)
                                               aTTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaa                                                >  1:2777935/1‑100 (MQ=255)
                                                ttGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaag                                               <  2:1254885/100‑1 (MQ=255)
                                                ttGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGGCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaag                                               <  2:1961713/100‑1 (MQ=255)
                                                  gCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaagta                                             >  2:1188809/1‑100 (MQ=255)
                                                  gCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaagta                                             >  2:1098707/1‑100 (MQ=255)
                                                   cAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaagtaa                                            >  1:901814/1‑100 (MQ=255)
                                                   cAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGgtaagtaa                                            <  2:60893/100‑1 (MQ=255)
                                                     aaTACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTaaaa                                          <  1:2488440/100‑1 (MQ=255)
                                                     aaTACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTaaaa                                          >  2:1541167/1‑100 (MQ=255)
                                                      aTACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAAc                                         <  2:98499/100‑1 (MQ=255)
                                                      aTACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAAc                                         >  1:648850/1‑100 (MQ=255)
                                                      aTACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGACTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAAc                                         <  2:1938944/100‑1 (MQ=255)
                                                         ccGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATc                                      >  2:2352088/1‑100 (MQ=255)
                                                          cGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCa                                     <  2:2346630/100‑1 (MQ=255)
                                                          cGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCa                                     <  2:1249602/100‑1 (MQ=255)
                                                          cGAGGCCGGGAAATAACACCCTTTCTCGAGATTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACAATTTAAATCGGTAAGTAAAACAtaa                                     >  2:1726368/1‑98 (MQ=255)
                                                           gAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCaa                                    <  1:1080482/100‑1 (MQ=255)
                                                             ggCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACa                                  >  2:2667777/1‑100 (MQ=255)
                                                                cGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACatat                               >  2:2797465/1‑100 (MQ=255)
                                                                cGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACatat                               >  2:2269110/1‑100 (MQ=255)
                                                                cGGGAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACatat                               >  1:660738/1‑100 (MQ=255)
                                                                  ggAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTg                             <  2:2715523/100‑1 (MQ=255)
                                                                  ggAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTg                             <  1:358413/100‑1 (MQ=255)
                                                                  ggAAATAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTg                             <  1:162360/100‑1 (MQ=255)
                                                                    aaaTAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCg                           <  1:2405084/100‑1 (MQ=255)
                                                                    aaaTAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCg                           <  2:834829/100‑1 (MQ=255)
                                                                      aTAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTa                         <  2:3034442/100‑1 (MQ=255)
                                                                       tAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTAt                        >  1:2151244/1‑100 (MQ=255)
                                                                       tAACACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTAt                        >  1:502959/1‑100 (MQ=255)
                                                                        aaCACCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTAtt                       <  2:3017170/100‑1 (MQ=255)
                                                                          cacCCTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCg                     >  2:863672/1‑100 (MQ=255)
                                                                            cccTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCggg                   <  2:2538115/100‑1 (MQ=255)
                                                                            cccTTTCTCGAGCTTCTTCAGGCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCggg                   >  2:649004/1‑100 (MQ=255)
                                                                             cgatcttcGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGt                  <  1:2462727/94‑1 (MQ=255)
                                                                             ccTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCggg                   <  2:1321457/99‑1 (MQ=255)
                                                                             ccTTTCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGt                  <  1:255196/100‑1 (MQ=255)
                                                                                ttCTCGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAgc               <  1:1574753/100‑1 (MQ=255)
                                                                                ttCTCGAGCTTCTTAAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAg                <  2:2982609/99‑1 (MQ=255)
                                                                                 tctcGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAgcg              <  1:1913545/100‑1 (MQ=255)
                                                                                   tcGAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAgatcg            >  2:2462705/1‑96 (MQ=255)
                                                                                     gAGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTcc          <  1:1791782/100‑1 (MQ=255)
                                                                                      aGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCa         <  1:1031681/100‑1 (MQ=255)
                                                                                      aGCTTCTTCAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCACTCCa         <  2:2304257/100‑1 (MQ=255)
                                                                                         ttcttcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGt      <  2:2899296/100‑1 (MQ=255)
                                                                                          tcttcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTa     >  2:1890661/1‑100 (MQ=255)
                                                                                          tcttcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTa     <  2:2645930/100‑1 (MQ=255)
                                                                                           cttcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTAg    <  1:2006639/100‑1 (MQ=255)
                                                                                           cttcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTAg    >  1:2172899/1‑100 (MQ=255)
                                                                                            ttcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTAGc   >  2:497153/1‑100 (MQ=255)
                                                                                             tcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTAGCg  >  1:1482689/1‑100 (MQ=255)
                                                                                             tcAGTCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTAGCg  <  1:281002/100‑1 (MQ=255)
                                                                                                 |                                                                                               
TTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGCCGGGAAATAACACCCTTTCTCGAGCTTCTTCAGGCTTGAAACAGGAATACGCTTTCCACGGAAGCAACCATTTAAATCGGTAAGTAAAACATCAACATATTGCGTATTCGGGTAGCGCTCCAGGTAGCG  >  NC_000913/1360632‑1360824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: