Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,127,198 A→G S373P (TCA→CCA)  gmd ← GDP‑D‑mannose dehydratase, NAD(P)‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,127,1980AG95.4% 362.7 / 3.5 109S373P (TCA→CCA) gmdGDP‑D‑mannose dehydratase, NAD(P)‑binding
Reads supporting (aligned to +/- strand):  ref base A (2/3);  new base G (54/50);  total (56/53)
Fisher's exact test for biased strand distribution p-value = 6.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 110 total aligned reads displayed.

TCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGACTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGACACCATC  >  NC_000913/2127102‑2127292
                                                                                                |                                                                                              
tCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGagat                                                                                             >  2:2216953/1‑97 (MQ=255)
 ccACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTcc                                                                                            >  2:982044/1‑100 (MQ=255)
 ccACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTcc                                                                                            <  2:817197/100‑1 (MQ=255)
 ccACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTcc                                                                                            >  2:1607188/1‑100 (MQ=255)
 ccACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTcc                                                                                            >  1:470321/1‑100 (MQ=255)
  cacaTCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCa                                                                                           >  1:235964/1‑100 (MQ=255)
    caTCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAgc                                                                                         <  2:1509546/100‑1 (MQ=255)
     aTCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCGTCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAgcg                                                                                        <  2:1940495/100‑1 (MQ=255)
      tCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAgcgc                                                                                       >  2:413199/1‑100 (MQ=255)
      tCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAgcgc                                                                                       <  1:742072/100‑1 (MQ=255)
       cACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGcgcg                                                                                      >  2:1747600/1‑100 (MQ=255)
        aCCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGcgcgg                                                                                     >  1:1816422/1‑99 (MQ=255)
         ccGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGACTCCAGCGCGAt                                                                                    >  1:1589111/1‑100 (MQ=255)
           gcgcTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCg                                                                                  >  2:101595/1‑100 (MQ=255)
           gcgcTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCg                                                                                  <  1:470164/100‑1 (MQ=255)
           gcgcTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCg                                                                                  <  1:1050633/100‑1 (MQ=255)
           gcgcTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCg                                                                                  <  1:1650274/100‑1 (MQ=255)
             gcTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGcc                                                                                <  1:748449/100‑1 (MQ=255)
             gcTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGcc                                                                                <  1:1319260/100‑1 (MQ=255)
              cTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCa                                                                               <  1:1399034/100‑1 (MQ=255)
              cTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCa                                                                               <  2:2390114/100‑1 (MQ=255)
                gTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCAcg                                                                             >  1:207024/1‑100 (MQ=255)
                   cGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCAcgtcg                                                                          <  1:1687813/100‑1 (MQ=255)
                   cGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCAcgtcg                                                                          >  1:1698548/1‑100 (MQ=255)
                   cGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCAcgtc                                                                           <  2:804824/99‑1 (MQ=255)
                    gAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCAcgtcgt                                                                         <  1:1496109/100‑1 (MQ=255)
                    gAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGACTCCAGCGCGATCGCCAcgtcgt                                                                         >  2:2060328/1‑100 (MQ=255)
                      gCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAg                                                                       <  2:2405806/100‑1 (MQ=255)
                       ccgccgccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACGCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGc                                                                      <  1:1345409/98‑1 (MQ=255)
                       cTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGACTCCAGCGCGATCGCCACGTCGTAGc                                                                      <  1:2060347/100‑1 (MQ=255)
                        tGCCGCCTGATGGCGGAACCGACCATCCCGCGAGGACCAGCAGTAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGGAGcc                                                                     >  1:2884152/1‑100 (MQ=255)
                         gccgccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCg                                                                    >  2:1562244/1‑100 (MQ=255)
                           cgccTGATGGCGGAACTGTCCATCCCGCGCTGACCAGCAATAAAAACTCGCTGTTTACTCATGCGTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTg                                                                  >  2:2118717/1‑100 (MQ=255)
                           cgccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTg                                                                  <  2:2016340/100‑1 (MQ=255)
                           cgccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTg                                                                  <  1:2968788/100‑1 (MQ=255)
                           cgccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTg                                                                  >  1:893727/1‑100 (MQ=255)
                           cgccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTg                                                                  <  1:2363531/100‑1 (MQ=255)
                            gccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTga                                                                 >  1:303019/1‑100 (MQ=255)
                            gccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTga                                                                 >  2:451276/1‑100 (MQ=255)
                             ccTGATTGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTgag                                                                <  1:1375590/100‑1 (MQ=255)
                             ccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTgag                                                                <  2:1339422/100‑1 (MQ=255)
                             ccTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTgag                                                                <  1:1922170/100‑1 (MQ=255)
                                  tGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTc                                                           <  2:825054/100‑1 (MQ=255)
                                  tGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTc                                                           >  1:310159/1‑100 (MQ=255)
                                   ggCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTca                                                          <  2:323654/100‑1 (MQ=255)
                                    gCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTcag                                                         >  1:2517248/1‑100 (MQ=255)
                                     cGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTcagc                                                        <  1:2400142/100‑1 (MQ=255)
                                     cGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTcagc                                                        >  2:339556/1‑100 (MQ=255)
                                     cGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTcagc                                                        <  1:2560142/100‑1 (MQ=255)
                                      ggAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTcagca                                                       >  2:742508/1‑100 (MQ=255)
                                       gAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTcagcag                                                      >  1:455462/1‑100 (MQ=255)
                                         aCCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCagag                                                    <  2:955461/100‑1 (MQ=255)
                                           cGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCagagag                                                  >  2:2263890/1‑100 (MQ=255)
                                           cGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCagagag                                                  >  1:474171/1‑100 (MQ=255)
                                            gACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAgt                                                 >  2:820576/1‑100 (MQ=255)
                                               cATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGtt                                              >  2:1724294/1‑100 (MQ=255)
                                                aTCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGttt                                             >  1:2315792/1‑100 (MQ=255)
                                                 tCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGtttt                                            >  2:2077004/1‑100 (MQ=255)
                                                  cccGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGttttt                                           >  2:373833/1‑100 (MQ=255)
                                                  cccGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGttttt                                           <  2:1672119/100‑1 (MQ=255)
                                                  cccGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGttttt                                           >  1:2695688/1‑100 (MQ=255)
                                                   ccGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGtttttt                                          >  1:421701/1‑100 (MQ=255)
                                                   ccGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGtttttt                                          >  2:2179977/1‑100 (MQ=255)
                                                   ccGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGtttttt                                          >  2:1403068/1‑100 (MQ=255)
                                                   ccGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGtttttt                                          >  1:1271682/1‑100 (MQ=255)
                                                    cgcgATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTc                                         <  1:2240693/100‑1 (MQ=255)
                                                     gcgATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTcg                                        <  2:2528749/100‑1 (MQ=255)
                                                     gcgATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTcg                                        >  1:2676648/1‑100 (MQ=255)
                                                     gcgATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTcg                                        <  2:395043/100‑1 (MQ=255)
                                                      cgATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTcgc                                       >  1:2551031/1‑100 (MQ=255)
                                                      cgATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTcgc                                       >  1:1045449/1‑100 (MQ=255)
                                                       gATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTcgcc                                      <  2:789277/100‑1 (MQ=255)
                                                         tGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTcgccgc                                    >  1:997938/1‑100 (MQ=255)
                                                          gACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCt                                   <  1:1843372/100‑1 (MQ=255)
                                                            ccAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGtttttattgctggtc                                 >  1:1875525/1‑90 (MQ=255)
                                                            ccAGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTc                                 >  2:831010/1‑100 (MQ=255)
                                                              aGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGa                               >  2:630853/1‑100 (MQ=255)
                                                              aGCAATAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTCTTCGCCGCTTCGa                               >  1:1757588/1‑100 (MQ=255)
                                                                   tAAAAACTCGTTGTTTACTCATGCTTATGGCTCCAGCTCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCa                          >  2:2359729/1‑100 (MQ=255)
                                                                     aaaaCTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCAtt                        <  1:2222183/100‑1 (MQ=255)
                                                                       aaCTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAg                      >  2:2557063/1‑100 (MQ=255)
                                                                       aaCTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAg                      >  2:2709825/1‑100 (MQ=255)
                                                                         cTCGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGcc                    <  2:1418509/100‑1 (MQ=255)
                                                                           cGTTGTTTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGccac                  <  2:1755875/100‑1 (MQ=255)
                                                                              tgttTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCAt               >  1:1227517/1‑100 (MQ=255)
                                                                               gttTACTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGCGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCAtt              >  2:289172/1‑100 (MQ=255)
                                                                                 ttACTCATGCTTATGACTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTc            <  2:1589097/100‑1 (MQ=255)
                                                                                   aCTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAg          <  1:982053/100‑1 (MQ=255)
                                                                                   aCTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTACCCGTGAGATTTCAGCAGAGTGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAg          <  2:1655896/100‑1 (MQ=255)
                                                                                   aCTCATGCTTATGACTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAg          <  1:2260873/100‑1 (MQ=255)
                                                                                    cTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGa         <  2:1698535/100‑1 (MQ=255)
                                                                                    cTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGa         <  1:1724309/100‑1 (MQ=255)
                                                                                    cTCATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGa         <  1:45271/100‑1 (MQ=255)
                                                                                      cATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGaca       >  2:2407299/1‑100 (MQ=255)
                                                                                      cATGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCACCGCTTCGAGGTCATTAGCCACCATTTCAGaca       >  2:1165143/1‑100 (MQ=255)
                                                                                       aTGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGacac      <  2:2469618/100‑1 (MQ=255)
                                                                                        tGCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGACAcc     <  2:235961/100‑1 (MQ=255)
                                                                                         gCTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGACACCa    <  2:207021/100‑1 (MQ=255)
                                                                                          cTTATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGACACCAt   >  1:1996519/1‑100 (MQ=255)
                                                                                           ttATGGCTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGACACCAtc  >  1:406003/1‑100 (MQ=255)
                                                                                                |                                                                                              
TCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATGCTTATGACTCCAGCGCGATCGCCACGTCGTAGCCGTGAGATTTCAGCAGAGAGTGTTTTTTCGCCGCTTCGAGGTCATTAGCCACCATTTCAGACACCATC  >  NC_000913/2127102‑2127292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: