| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,951,605 | Δ1 bp | 26.5% | pseudogene (64/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,605 | 0 | G | . | 26.5% | 437.6 / 183.5 | 170 | pseudogene (64/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base G (59/65); new base . (24/21); total (83/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 173 total aligned reads displayed.
CTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCAGATGTGGGCT > NC_000913/3951506‑3951703 | ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTg < 2:687455/100‑1 (MQ=255) ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAc > 1:2983933/1‑100 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTa < 1:2484433/100‑1 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTa > 2:3251393/1‑100 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTa > 1:1573853/1‑100 (MQ=255) aCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTAt > 2:433437/1‑100 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTGCTGGCGTTACGACGATGCCGGTGACGCTATc > 2:1119699/1‑100 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACCGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCt < 1:476396/100‑1 (MQ=255) aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTa > 1:2202965/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAc > 1:802680/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTAcgc > 2:1024020/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAA‑CAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg < 1:1431329/100‑1 (MQ=255) cATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg > 1:1473787/1‑100 (MQ=255) tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACgcgc > 1:1212509/1‑100 (MQ=255) cagcagCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgtt > 2:1737412/1‑100 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgt > 1:738704/1‑100 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgt > 1:1260360/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt > 1:1961671/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt < 2:316273/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgttgt > 1:715810/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC‑‑TGTCGCTATCTACGCGCCgttgttgt < 2:585198/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttg < 2:1762917/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttg < 1:1278036/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgtt < 2:258687/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgtt < 1:3180849/100‑1 (MQ=255) cGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTa > 2:2094950/1‑100 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTaa > 2:1899859/1‑100 (MQ=255) ttAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTaaa < 2:1517633/100‑1 (MQ=255) tAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa < 1:2814133/100‑1 (MQ=255) aaaTCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAaac < 2:2949287/100‑1 (MQ=255) aaaTCAATGACTGACAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAaac < 1:2454740/100‑1 (MQ=255) aaTCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaaa > 1:229289/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaaa > 2:882937/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAaaca > 1:1866697/1‑100 (MQ=255) tCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaac < 1:1936992/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAaacaac > 2:130129/1‑100 (MQ=255) cAATGACGGTCAGCAACACTGCAACCGAGTTGCGTAATGAACATTCCTAGTGTTACTACCATCCCTGTGAAGCTATCTTCTCGCCGTTGTTGTTaaaa < 2:933625/98‑1 (MQ=255) aaTGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTTTaacaac < 1:1030180/100‑1 (MQ=255) aaTGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTg > 1:2950255/1‑100 (MQ=255) tGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTg > 2:74558/1‑100 (MQ=255) cTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCg < 2:619686/100‑1 (MQ=255) cTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCGACGCGCCGTTGTTGTTAAAACAACTGTCg > 2:1945547/1‑100 (MQ=255) ggCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATc > 2:2269793/1‑100 (MQ=255) ggCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATc > 1:2724044/1‑100 (MQ=255) gcagcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCg < 1:3188070/100‑1 (MQ=255) gcagcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCg < 2:2661541/100‑1 (MQ=255) agcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCg < 1:1173684/100‑1 (MQ=255) agcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTa > 2:1661649/1‑100 (MQ=255) cacTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCt > 1:989132/1‑100 (MQ=255) tGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 1:85118/100‑1 (MQ=255) c‑gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 1:394175/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGa < 2:2628666/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGAtt > 2:1651365/1‑100 (MQ=255) gcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTg < 1:1630994/100‑1 (MQ=255) cAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGc > 2:3235237/1‑100 (MQ=255) gCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGc > 2:1473643/1‑100 (MQ=255) gCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgt > 1:2603723/1‑100 (MQ=255) tGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg < 1:938097/100‑1 (MQ=255) cGTGATGAACATTCCTGGCTTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCTGATCGTAAACCTGCGGATTGcgtcg < 2:1095142/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCATAAACCTGCGGATTGcgtcg < 2:1990243/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:130130/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:442954/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg > 2:1201326/1‑100 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa > 1:3108748/1‑100 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 2:2265388/100‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:1067776/99‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 1:1096933/100‑1 (MQ=255) tgatgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc < 2:802678/100‑1 (MQ=255) atgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc > 2:3005066/1‑100 (MQ=255) tgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 1:1009056/100‑1 (MQ=255) tgaACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 1:1434856/100‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACca > 1:2899133/1‑100 (MQ=255) gaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcaca > 1:224305/1‑100 (MQ=255) aaCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 1:1980844/100‑1 (MQ=255) aaCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 1:2582401/100‑1 (MQ=255) aCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcaca < 1:1644495/100‑1 (MQ=255) aCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGa < 1:1661661/100‑1 (MQ=255) tCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtg‑tg < 1:2269809/100‑1 (MQ=255) ccTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑Tgg < 1:1771779/100‑1 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtg‑tg > 2:1606248/1‑100 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑Tggg > 1:3062979/1‑100 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑Tggg < 1:2337318/100‑1 (MQ=255) ggCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑Tggg < 1:3179199/100‑1 (MQ=255) ggCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGgc < 2:369723/100‑1 (MQ=255) gCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGgca < 2:2404596/100‑1 (MQ=255) cGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGgcag > 1:1817161/1‑100 (MQ=255) gTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGgcagc < 2:2560652/100‑1 (MQ=255) gTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGgcagc > 1:2843708/1‑100 (MQ=255) tACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGgcagc > 1:1957503/1‑100 (MQ=255) cGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCAc > 2:3104909/1‑100 (MQ=255) cGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCAc > 2:2892152/1‑100 (MQ=255) cGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCa > 1:500484/1‑100 (MQ=255) gACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCa < 2:2843684/99‑1 (MQ=255) aCCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCa > 2:616891/1‑100 (MQ=255) aCCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCa < 1:3005093/100‑1 (MQ=255) aCCATCCCGGT‑‑CACTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCAGa > 2:1437927/1‑100 (MQ=255) cATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTTGGGGCAGCACCAg > 1:2362886/1‑100 (MQ=255) tCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCAGAtg < 1:1813573/100‑1 (MQ=255) ggTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCAGATGTGGGCt > 2:782988/1‑100 (MQ=255) gTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGT‑AACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCAGAtgtg < 1:1119704/96‑1 (MQ=255) | CTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATG‑TGGGGCAGCACCAGATGTGGGCT > NC_000913/3951506‑3951703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |