| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,951,606 | Δ1 bp | 26.5% | pseudogene (65/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,606 | 0 | A | . | 26.5% | 454.2 / 170.5 | 170 | pseudogene (65/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base A (59/65); new base . (24/21); total (83/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGC > NC_000913/3951508‑3951707 | ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGAc > 1:2983933/1‑100 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAA‑CAAGGACCGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACg < 2:60659/99‑1 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTa > 1:1573853/1‑100 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTa < 1:2484433/100‑1 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTa > 1:2401209/1‑100 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGACTAGCAGAAACACTAC‑GCGCAGCTGCGTGATGAACATTCCTGGAGTTACGACCATCCCGGTGACGCTATc > 2:304604/1‑100 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACCGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCt < 1:476396/100‑1 (MQ=255) aGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTa > 1:2202965/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAc > 1:802680/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAc > 2:665004/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTAcgc > 2:1024020/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAA‑CAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg < 1:1431329/100‑1 (MQ=255) cATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg > 1:1473787/1‑100 (MQ=255) cATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTAcgc > 1:315863/1‑99 (MQ=255) tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACgcgc > 1:1212509/1‑100 (MQ=255) aCAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgt > 2:1434848/1‑100 (MQ=255) cagcagCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgtt > 2:1737412/1‑100 (MQ=255) cagcagCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgtt > 2:2047217/1‑100 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgt > 1:738704/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgtt < 1:866228/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt < 2:2202949/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt > 1:2265404/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt < 2:316273/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttg < 2:1762917/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttg < 1:1278036/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgtt < 1:3180849/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgtt < 2:258687/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgttgtt < 2:1664553/100‑1 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCG‑‑GACGCTATCTACGCGCCGTTGTTGTTaa < 1:1979176/100‑1 (MQ=255) tAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa < 1:2814133/100‑1 (MQ=255) aaaTCAATGACTGACAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAaac < 1:2454740/100‑1 (MQ=255) aaTCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaaa > 2:882937/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaaa > 1:229289/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAaaca > 1:1866697/1‑100 (MQ=255) tCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaac < 1:1936992/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaaca < 1:1434529/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAaacaac < 2:1083384/100‑1 (MQ=255) cAATGACGGTCAGCAACACTGCAACCGAGTTGCGTAATGAACATTCCTAGTGTTACTACCATCCCTGTGAAGCTATCTTCTCGCCGTTGTTGTTaaaa < 2:933625/98‑1 (MQ=255) aaTGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTTTaacaac < 1:1030180/100‑1 (MQ=255) aaTGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTg > 1:2950255/1‑100 (MQ=255) tGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTg > 2:74558/1‑100 (MQ=255) cTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCg < 2:2804664/100‑1 (MQ=255) cTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCg < 2:619686/100‑1 (MQ=255) cTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCGACGCGCCGTTGTTGTTAAAACAACTGTCg > 2:1945547/1‑100 (MQ=255) ggCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATc > 2:2269793/1‑100 (MQ=255) ggCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATc > 1:2724044/1‑100 (MQ=255) gcagcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCg < 1:3188070/100‑1 (MQ=255) agcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCg < 1:1173684/100‑1 (MQ=255) gcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTaa < 1:433439/100‑1 (MQ=255) acacTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAcc < 2:2401193/100‑1 (MQ=255) cacTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCt > 1:989132/1‑100 (MQ=255) tGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 2:2539952/100‑1 (MQ=255) tGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 1:85118/100‑1 (MQ=255) gc‑gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCgg < 2:2983906/100‑1 (MQ=255) c‑gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 1:394175/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGa < 2:2628666/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGAtt < 2:1095553/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGAtt > 2:1651365/1‑100 (MQ=255) gCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgt > 1:2603723/1‑100 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCATAAACCTGCGGATTGcgtcg < 2:1990243/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:130130/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg > 2:1201326/1‑100 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa > 1:3108748/1‑100 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:1067776/99‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 1:1096933/100‑1 (MQ=255) tgatgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc < 2:802678/100‑1 (MQ=255) gatgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa > 2:509139/1‑100 (MQ=255) atgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACca < 1:1603432/100‑1 (MQ=255) tgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 1:1009056/100‑1 (MQ=255) gaccATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 1:2816163/96‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACca > 1:2899133/1‑100 (MQ=255) aaCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 1:2582401/100‑1 (MQ=255) aaCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 1:1980844/100‑1 (MQ=255) aCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcaca < 1:1644495/100‑1 (MQ=255) aCATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGa < 1:1661661/100‑1 (MQ=255) cATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAt > 1:1824336/1‑100 (MQ=255) tCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtgtg < 1:2269809/100‑1 (MQ=255) ccTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgg < 1:1771779/100‑1 (MQ=255) ccTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgg < 2:3251363/100‑1 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtgtg > 2:1606248/1‑100 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtgtg > 2:1605296/1‑100 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg > 1:3062979/1‑100 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg < 1:2337318/100‑1 (MQ=255) ggCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 2:369723/100‑1 (MQ=255) tACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagc > 1:1957503/1‑100 (MQ=255) aCGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAcc < 1:1248895/100‑1 (MQ=255) aCGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAcc < 1:510494/100‑1 (MQ=255) aCGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAcc < 2:1473779/100‑1 (MQ=255) cGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAc > 2:2892152/1‑100 (MQ=255) cGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCa > 1:500484/1‑100 (MQ=255) tccATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCa > 2:2635445/2‑100 (MQ=255) aCCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCa > 2:374708/1‑100 (MQ=255) aCCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCa < 1:3005093/100‑1 (MQ=255) aCCATCCCGGT‑‑CACTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGa > 2:1437927/1‑100 (MQ=255) tCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGAtg > 2:2914216/1‑100 (MQ=255) tCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGAtg < 1:1813573/100‑1 (MQ=255) ggTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCt > 2:782988/1‑100 (MQ=255) gTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGT‑AACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGAtgtg < 1:1119704/96‑1 (MQ=255) tGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGTATTGCGTCGTGACCACAGATGTGGCGCAGCACCCGAtgttgtct > 2:3175484/1‑95 (MQ=255) aCGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTgcgc < 1:1762241/100‑1 (MQ=255) | CTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGC > NC_000913/3951508‑3951707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |