| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,951,616 | Δ1 bp | 33.3% | pseudogene (75/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,616 | 0 | C | . | 33.3% | 395.1 / 234.8 | 168 | pseudogene (75/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base C (53/59); new base . (21/35); total (74/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.29e-02 | |||||||||||
Only 100 of 177 total aligned reads displayed.
GCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATC > NC_000913/3951517‑3951715 | cATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcg > 1:1473787/1‑100 (MQ=255) tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTAcgccg > 1:1166938/1‑98 (MQ=255) gcagcCGTTAAATCAATGACAGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgt > 2:1979164/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt > 1:2265404/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt < 2:316273/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgt < 2:2202949/100‑1 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgttgt > 1:715810/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCC‑‑TGTCGCTATCTACGCGCCgttgttgt < 2:585198/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCgttgttg < 1:1278036/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCgttgttgtt < 1:3180849/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCgttgttgtt < 2:1664553/100‑1 (MQ=255) cGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTa > 2:2094950/1‑100 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTaa > 2:1899859/1‑100 (MQ=255) gTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCG‑‑GACGCTATCTACGCGCCGTTGTTGTTaa < 1:1979176/100‑1 (MQ=255) ttAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTaaa < 2:1517633/100‑1 (MQ=255) tAAATCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTa < 1:2814133/100‑1 (MQ=255) aaaTCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAaac < 2:2949287/100‑1 (MQ=255) aaaTCAATGACTGACAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAaac < 1:2454740/100‑1 (MQ=255) aaTCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTaaa > 1:229289/1‑100 (MQ=255) tCAATGACTGGCAGCAACACTGCAGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaac < 1:1936992/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAaaca < 1:1434529/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAaacaac > 2:130129/1‑100 (MQ=255) tCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAaacaac < 2:1083384/100‑1 (MQ=255) aaTGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTTTaacaac < 1:1030180/100‑1 (MQ=255) tGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTg > 2:74558/1‑100 (MQ=255) aCTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCgg < 1:204922/100‑1 (MQ=255) cTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCg < 2:619686/100‑1 (MQ=255) cTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCg < 2:2804664/100‑1 (MQ=255) ggCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATc > 1:2522664/1‑100 (MQ=255) ggCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATc > 2:2269793/1‑100 (MQ=255) gcagcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCg < 1:3188070/100‑1 (MQ=255) cagcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCg < 2:2624753/99‑1 (MQ=255) cagcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGt > 1:1300564/1‑100 (MQ=255) agcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTa > 2:1661649/1‑100 (MQ=255) gcaACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTaa < 1:133378/100‑1 (MQ=255) cTGC‑GCGCAGCTGCGTGATGAACATTCATGGCGTTAAGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAcc > 2:889261/1‑99 (MQ=255) tGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 2:2539952/100‑1 (MQ=255) tGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 1:85118/100‑1 (MQ=255) gc‑gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCgg < 1:1904781/100‑1 (MQ=255) c‑gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 1:394175/100‑1 (MQ=255) c‑gcgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCg < 2:17615/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGAtt < 1:1651375/100‑1 (MQ=255) gcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTg < 1:1630994/100‑1 (MQ=255) cAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGc > 2:3235237/1‑100 (MQ=255) aGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcg < 2:164057/100‑1 (MQ=255) gCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGc > 2:1473643/1‑100 (MQ=255) gCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgt > 1:2603723/1‑100 (MQ=255) tGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg < 1:938097/100‑1 (MQ=255) cGTGATGAACATTCCTGGCTTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCTGATCGTAAACCTGCGGATTGcgtcg < 2:1095142/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCATAAACCTGCGGATTGcgtcg < 2:1990243/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:442954/100‑1 (MQ=255) cGTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg > 2:1201326/1‑100 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa > 1:3108748/1‑100 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 2:2265388/100‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg < 1:1067776/99‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGa < 1:1096933/100‑1 (MQ=255) tgatgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc > 1:2795297/1‑100 (MQ=255) tgatgaACATTCCTAGCGTTACGACCATCCCGGGGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg < 1:1200068/98‑1 (MQ=255) atgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc > 2:3005066/1‑100 (MQ=255) atgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACca < 1:1603432/100‑1 (MQ=255) tgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 1:1009056/100‑1 (MQ=255) tgaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac > 1:491983/1‑100 (MQ=255) tgaACATTCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcac < 2:738703/100‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACca > 1:2899133/1‑100 (MQ=255) cATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAt > 1:1824336/1‑100 (MQ=255) tCCTGGCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtgtg < 1:2269809/100‑1 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtgtg > 2:1605296/1‑100 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg > 2:1019190/1‑100 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg < 1:2337318/100‑1 (MQ=255) cTGGCGTTACGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg > 1:3062979/1‑100 (MQ=255) tGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgg < 1:74560/100‑1 (MQ=255) ggCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTggg < 1:3179199/100‑1 (MQ=255) ggCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 2:369723/100‑1 (MQ=255) gCGTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgca < 2:2404596/100‑1 (MQ=255) gTTACGACCATCCCGGT‑‑CGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagc < 2:2560652/100‑1 (MQ=255) tACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagc > 1:1957503/1‑100 (MQ=255) aCGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAcc < 2:809822/100‑1 (MQ=255) aCGACCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAcc < 1:1248895/100‑1 (MQ=255) cGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAc > 2:2892152/1‑100 (MQ=255) tccATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCa > 2:2635445/2‑100 (MQ=255) aCCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCa > 2:374708/1‑100 (MQ=255) aCCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCa < 1:3005093/100‑1 (MQ=255) aCCATCCCGGTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGTGGCAGCACCa > 1:2976908/1‑98 (MQ=255) aCCATCCCGGT‑‑CACTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGa > 2:1437927/1‑100 (MQ=255) tCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGAtg < 1:1813573/100‑1 (MQ=255) tCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGAtg > 2:2914216/1‑100 (MQ=255) ggTGACGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCt > 2:782988/1‑100 (MQ=255) gTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGT‑AACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGAtgtg < 1:1119704/96‑1 (MQ=255) tcGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTgc > 1:294104/2‑100 (MQ=255) aCGCTATCTA‑‑CGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTgcgc < 1:1762241/100‑1 (MQ=255) gCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTgcgc < 2:2697737/100‑1 (MQ=255) cTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCgca < 1:2825894/100‑1 (MQ=255) tATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCgcag < 1:832619/100‑1 (MQ=255) tATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCgcag > 2:2498107/1‑100 (MQ=255) tCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCgcagca < 1:509141/100‑1 (MQ=255) cTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGcac > 2:2523160/1‑100 (MQ=255) tACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGcaca > 1:1726092/1‑100 (MQ=255) aCGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCCGCACAt > 1:2407638/1‑100 (MQ=255) cgcgCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATc > 1:1766875/1‑100 (MQ=255) cgcgCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATc < 2:2724021/100‑1 (MQ=255) | GCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGC‑GCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATC > NC_000913/3951517‑3951715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |