| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3101756 | NA (NA) | 8 (0.070) | 5/164 | NT | NA | noncoding (61/79 nt) | REP218 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP218 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 3101767 | NA (NA) | noncoding (72/79 nt) | REP218 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP218 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
AGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3101651‑3101756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTATC < NC_000913/3101767‑3101672 AGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGG < 2:1164336/100‑1AGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGG < 1:2831077/100‑1AGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGG > 1:2135212/1‑100 GCATTTGCTGGCCCCAGATTGATAACAACGTCCGCGTTTTCCATAACGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATAGTGCATATTTCCAGGC > 1:181185/1‑100 GCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGC > 1:1837171/1‑100 GCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGC > 1:2937637/1‑100 CATTTGCTGGCCCTAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTCTCCCGCCTACTCGATCGTGCATCTTTCCAGGCC < 2:2146499/100‑1 CATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCC < 1:2655886/100‑1 ATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCT < 2:1984551/100‑1 TTTGCTGGCTCCAGATTGATAACAAAGTACGCGTTTTCCATGCCTGATGCGGCCTAAACACCTTATCCCGCTTACTCGATCGTGCATCTTTCTAGGg < 2:2539283/97‑2 TTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTG < 2:2242131/100‑1 TTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGA > 2:1883420/1‑100 TGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGAT < 1:1160937/100‑1 TGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCAATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGAT > 2:2709419/1‑100 TAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCGCTACGCTTATCAGG < 1:240787/100‑1 TAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCGCTACGCTTATCAGG < 1:2036988/100‑1 AACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAACCACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCACTACGCTTATCAGGC < 2:2102021/100‑1 AAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCGCTACGCTTATCAGGCCTG < 2:3231779/100‑1 AAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCGCTACGCTTATCAGGCCTG < 2:451397/100‑1 AAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCGCTACGCTTATCAGGCCTG < 2:452981/100‑1 AAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCGCTACGCTTATCAGGCCTGG < 2:351796/100‑1 GTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGATGCGCTACGCTTATCAGGCCTGGAAAGATGC < 2:354337/100‑1 GCCTGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTT < 1:1841773/100‑1 GCCTGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTT < 2:1208690/100‑1 CCTGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTA < 1:808418/100‑1 CCTGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTA < 1:3155212/100‑1 CCTGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTA > 1:2959146/1‑100 CCTGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTA < 1:1369413/100‑1 CTGATGCGCTACGCGTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAGGGTGTTTACGCCGCATCCGGCATGGAGAACGCGTACTTTGTTAT > 2:1450997/1‑100 TGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTATC > 2:1651809/1‑100 TGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTATC < 2:1635857/100‑1 TGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTATC < 1:360467/100‑1 TGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTATC < 1:2923575/100‑1 TGATGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTA > 1:1714861/1‑98 TGATGCGCTACGCTTATCAGGCCTGGAAAGATCCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGT < 1:3097892/96‑1 AGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATCGTGCATCTTTCCAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3101651‑3101756‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGCTACGCTTATCAGGCCTGGAAAGATGCACGATCGAGTAGGCGGGATAAGGTGTTTACGCCGCATCCGGCATGGAAAACGCGTACTTTGTTATC < NC_000913/3101767‑3101672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |