| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4587871 = | NA (NA) | 7 (0.060) | 6/162 | NT | NA | intergenic (+8/+38) | mrr/yjiA | methylated adenine and cytosine restriction protein/metal‑binding GTPase |
| ? | NC_000913 | 4587900 = | NA (NA) | intergenic (+37/+9) | mrr/yjiA | methylated adenine and cytosine restriction protein/metal‑binding GTPase | |||||
ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4587977‑4587871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggccCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC > NC_000913/4587900‑4587998 ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCA < 1:2682211/100‑1ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCA > 2:2371183/1‑100ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCA < 1:2500629/100‑1ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCA < 2:799138/100‑1 GGTGTTTATCGGGATCCAGCTGCCGGAGGCAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATC < 2:1890876/100‑1 TGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCG < 1:244798/100‑1 TTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGTCCGGATAAGGCGCAGCCGCATCCGGCC < 2:2201362/100‑1 TTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC > 1:1523202/1‑100 TTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC < 1:2597224/100‑1 TTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC < 1:306828/100‑1 TTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC > 2:1526560/1‑100 TGGGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAT > 1:810636/1‑100 tGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAA < 1:1223593/99‑1 GGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAA > 1:637902/1‑100 GCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAA > 2:2244254/1‑100 GCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAA > 2:1223587/1‑100 CCGGATAAGGCGCAGCCGCATCCGGCACATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTATTCCTCCGCCAGCTGGATCCCGATAAAC > 2:1053678/1‑100 GGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACAC > 1:1522346/1‑100 TCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTT > 1:1541609/1‑100 TCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTT < 2:2243057/100‑1 TCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTT > 2:191281/1‑100 CCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTT > 1:1023107/1‑100 CCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTT > 2:1551863/1‑100 CCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTT < 1:1637586/100‑1 GGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTC > 1:1168093/1‑100 GGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTC < 2:1927947/100‑1 GCCCATAACCCCTTACTTCCTCACCCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACGCCATCGTGCTATGCGGTTTTTC < 2:912192/99‑1 GCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCA < 2:1112459/100‑1 CCCATAACCCCTTACTTCCTCAACCCCGCGAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCAT < 1:2622757/100‑1 CCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC < 2:205272/100‑1 CCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC < 1:2106324/100‑1 ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4587977‑4587871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggccCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC > NC_000913/4587900‑4587998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |