BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3277814	NA (NA)	7 (0.060)	7/162	NT	NA	intergenic (+13/+42)	yhaV/agaR	toxin of the SohB(PrlF)‑YhaV toxin‑antitoxin system/transcriptional repressor of the aga regulon
*	?	NC_000913	= 3277847	NA (NA)	7 (0.060)	7/162	NT	NA	noncoding (29/29 nt)	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 150 total aligned reads displayed.

ATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATC  >  NC_000913/3277716‑3277912

ataCCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATg                                                                                                   <  1:1400268‑M1/100‑2 (MQ=255)

ataCCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATg                                                                                                   <  2:1921900‑M1/100‑2 (MQ=255)

ataCCGTATTCAGCAAAATGTTAAAAAGAGGACATCCACCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATg                                                                                                   <  2:2098053‑M1/100‑2 (MQ=255)

 taCCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATgc                                                                                                  <  2:2153262‑M1/100‑3 (MQ=255)

  aCCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATgcc                                                                                                 >  1:2131087‑M1/1‑97 (MQ=255)

   ccGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGCCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATgccc                                                                                                >  1:2898263‑M1/1‑96 (MQ=255)

   ccGTATTAAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATgc                                                                                                  <  1:1384389‑M1/98‑3 (MQ=255)

       aTTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgccg                                                                                            >  1:1760784/1‑100 (MQ=255)

         tCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGaa                                                                                          >  1:1937404/1‑100 (MQ=255)

          cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATACCCGCCGAAc                                                                                         >  2:1573123/1‑100 (MQ=255)

          cAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAACAAACCCATTGATGGTGTTCACAATGCccgcc                                                                                             >  2:602590/1‑96 (MQ=255)

           aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGACGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                        >  2:1132416/1‑100 (MQ=255)

           aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                        >  1:3087722/1‑100 (MQ=255)

           aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                        <  1:1902927/100‑1 (MQ=255)

            gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAGCCCTCACCCGAGGAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                       >  2:955242/1‑100 (MQ=255)

            gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                       >  2:3026759/1‑100 (MQ=255)

            gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                       >  2:1009208/1‑100 (MQ=255)

                aaTGTTAAAAAGAGGACATCCTCCTGCCGCCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCACAGATGCCGTCCACAATGCCCGCCGAACGCAtcc                                                                                   >  2:768433/1‑98 (MQ=255)

                 aTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCg                                                                                  <  2:1527128/100‑1 (MQ=255)

                 aTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCg                                                                                  >  2:804811/1‑100 (MQ=255)

                  tGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgt                                                                                 <  1:3176087/100‑1 (MQ=255)

                    ttAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtgt                                                                               <  2:2298837/100‑1 (MQ=255)

                     tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                              >  1:2318336/1‑100 (MQ=255)

                      aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                              >  2:3004471/1‑99 (MQ=255)

                      aaaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTg                                                                             <  2:2747758/100‑1 (MQ=255)

                       aaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGa                                                                            <  2:1628974/100‑1 (MQ=255)

                        aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGCACGCATACGTGTTGAc                                                                           >  2:367080/1‑100 (MQ=255)

                        aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAc                                                                           <  1:1464646/100‑1 (MQ=255)

                         aaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAcc                                                                          >  2:65456/1‑100 (MQ=255)

                         aaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAcc                                                                          <  2:2318320/100‑1 (MQ=255)

                         aaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGCGTTGAcc                                                                          <  1:1709710/100‑1 (MQ=255)

                             ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCG                                                                      >  2:910242‑M2/1‑100 (MQ=255)

                             ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCG                                                                      >  1:733243‑M2/1‑100 (MQ=255)

                              gACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGG                                                                     <  1:2785582‑M2/100‑1 (MQ=255)

                               aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGG                                                                    >  1:2536130‑M2/1‑100 (MQ=255)

                               aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGG                                                                    <  1:2173110‑M2/100‑1 (MQ=255)

                               aCATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGG                                                                    <  2:2449496‑M2/100‑1 (MQ=255)

                                   cctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATgcccgctggtcaacacgaatgcgttcggcgggcatt                                                                <  1:1684908‑M1/100‑37 (MQ=255)

                                    ctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTTTTGTTGACCAGCGGGCATc                                                                <  2:496750/99‑1 (MQ=255)

                                     tcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCt                                                              <  1:327642/100‑1 (MQ=255)

                                       ctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAATCCATTGAGGGTGTTCACAATCCCCGCCGATCGCATTCGTGTTGACCAGCGGGCATCCttt                                                            <  2:2729790/100‑1 (MQ=255)

                                        tGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                           <  1:586689/100‑1 (MQ=255)

                                         gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                          <  2:3242300/100‑1 (MQ=255)

                                          ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                         <  1:2359696/100‑1 (MQ=255)

                                          ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                         <  1:277055/100‑1 (MQ=255)

                                          ccGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCAAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                         >  1:2598191/1‑100 (MQ=255)

                                           cGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCa                                                        >  1:590720/1‑100 (MQ=255)

                                            gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtctc                                                         <  2:473652/98‑1 (MQ=255)

                                             aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                      <  1:3244051/100‑1 (MQ=255)

                                              cTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTc                                                     <  1:1308770/100‑1 (MQ=255)

                                               tGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                    <  1:1245769/100‑1 (MQ=255)

                                                gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                   <  1:793992/100‑1 (MQ=255)

                                                gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                   <  1:844731/100‑1 (MQ=255)

                                                gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGACCGACGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                   <  2:288279/100‑1 (MQ=255)

                                                  gAAACCCTCACCCGAGAAACAGAAGAATCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                 <  2:170278/100‑1 (MQ=255)

                                                  gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                 <  2:1141549/100‑1 (MQ=255)

                                                    aaCCATCACCCGAGACACAGAAGCAACCTATTGATGGTGTTCACCACGCACGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTcc                                                    <  1:955247/95‑1 (MQ=255)

                                                      cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCa                                             >  2:1434986/1‑100 (MQ=255)

                                                      cccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTACCCGACCa                                             >  2:3217502/1‑100 (MQ=255)

                                                       ccTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAg                                            <  2:299766/100‑1 (MQ=255)

                                                        cTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGa                                           >  2:2678742/1‑100 (MQ=255)

                                                           aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                        <  1:2975829/100‑1 (MQ=255)

                                                           aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCATGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                        >  2:2279370/1‑100 (MQ=255)

                                                            cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                       >  2:1427492/1‑100 (MQ=255)

                                                             ccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATgcccgctggtcaacacgaatgcgttcggcgggcattgtgaacaccatcaatgggtttcttct                                      <  1:1674062‑M1/100‑63 (MQ=255)

                                                               gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACtn                                    <  1:2350626/100‑2 (MQ=255)

                                                                    aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                               >  1:1876139/1‑100 (MQ=255)

                                                                     cAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAccc                              >  1:636774/1‑100 (MQ=255)

                                                                      agaagaAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcccc                             >  2:2329251/1‑100 (MQ=255)

                                                                        aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                           <  1:1490001/100‑1 (MQ=255)

                                                                        aagaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAg                           <  1:2449512/100‑1 (MQ=255)

                                                                          gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                         >  1:2865801/1‑100 (MQ=255)

                                                                          gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                         <  1:2688740/100‑1 (MQ=255)

                                                                             aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                      >  2:1437487/1‑100 (MQ=255)

                                                                                cATTTATTGTGTTCACAATGCCCGCCGAACGCACTCGAGTTGACCAGCGGGCCTCCTTTCTTACTCCCCGATCAGAATCACTTCAAGCACAGCGTTTc                     >  2:1944506/1‑98 (MQ=255)

                                                                                cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                   <  2:2785558/100‑1 (MQ=255)

                                                                                   tGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGt                <  1:2963457/100‑1 (MQ=255)

                                                                                    gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc               >  2:21518/1‑100 (MQ=255)

                                                                                    gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc               >  1:2334520/1‑100 (MQ=255)

                                                                                     aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcn              <  2:1530223/100‑2 (MQ=255)

                                                                                     aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc              <  1:1427500/100‑1 (MQ=255)

                                                                                        gtgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcg           <  1:1922056‑M2/100‑57 (MQ=255)

                                                                                         tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc          >  2:1558135/1‑100 (MQ=255)

                                                                                          gtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctggttcgctggtgagggttttccagtcgg          <  1:957139‑M2/99‑58 (MQ=255)

                                                                                            tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg       <  1:161506/100‑1 (MQ=255)

                                                                                            tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg       <  1:1745593/100‑1 (MQ=255)

                                                                                            tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg       >  2:184192/1‑100 (MQ=255)

                                                                                            tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg       >  1:318389/1‑100 (MQ=255)

                                                                                            tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg        <  1:1030370/99‑1 (MQ=255)

                                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTTCAGGc      <  1:768435/100‑1 (MQ=255)

                                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc      >  2:1319921/1‑100 (MQ=255)

                                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc      <  1:3136535/100‑1 (MQ=255)

                                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc      >  1:1785298/1‑100 (MQ=255)

                                                                                             cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc      <  1:1429185/100‑1 (MQ=255)

                                                                                              acaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcggcagga     <  2:639756‑M2/100‑63 (MQ=255)

                                                                                              acaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCt     >  1:1156458/1‑100 (MQ=255)

                                                                                               caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa    >  1:170035/1‑100 (MQ=255)

                                                                                               caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTCCCAGGCTa    <  2:3018572/100‑1 (MQ=255)

                                                                                                aaTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcggcaggagg   <  1:1684908‑M2/100‑65 (MQ=255)

                                                                                                 aTGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCattgtgaacaccatcaatgggtttcttctgtttctcgggtgagggtttcccagtcggcaggagga  <  1:1783621‑M2/100‑66 (MQ=255)

ATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATC  >  NC_000913/3277716‑3277912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.