New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3620569 =	NA (NA)	11 (0.100)	4/166	NT	100%	coding (1378/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	3620582 =	0 (0.000)					coding (1391/4236 nt)	rhsB	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTG  >  NC_000913/3620531‑3620646                                       |                                                                               aTGTGGTGACGGGCCTCATCACGCGGATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAATTAACGTCAGCCACCGG‑GCC                  >  2:1980620‑M2/1‑100 (MQ=255) aTGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCC                  >  2:2414171‑M2/1‑100 (MQ=255)  tgtgGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCT                 <  2:18472‑M2/100‑1 (MQ=255)   gtggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTG                <  1:876170‑M2/100‑1 (MQ=255)   gtggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTG                >  2:77351‑M2/1‑100 (MQ=255)    tggtgACGGGCCTCATCACGCGAATAACCACGCCGGATGGCAGGGCATCAGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTG                <  2:156086‑M2/99‑1 (MQ=255)     ggtgACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGAC              <  2:905633‑M2/100‑1 (MQ=255)      gtgACGGGCCTCATCACGCGCATAACCACGCTGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACG             >  1:1488324‑M2/1‑100 (MQ=255)           gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac        >  1:105818‑M2/1‑95 (MQ=255)           gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac        >  1:1838569‑M2/1‑95 (MQ=255)           gggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaac        >  1:2543668‑M2/1‑95 (MQ=255)            ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact       >  1:744373‑M2/1‑94 (MQ=255)            ggCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGC‑CCGGTGGCTGACGttaact       >  2:1581233‑M2/1‑94 (MQ=255)             gCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactg      >  2:402174‑M2/1‑93 (MQ=255)                  atcaCGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGGCCCGGT‑GGCTGACGttaactggttg  >  2:1361271‑M2/1‑88 (MQ=255)                                       |                                                                               ATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGG‑GCCTGACGGGCTGGAATTG  >  NC_000913/3620531‑3620646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.