| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3706042 | NA (NA) | 10 (0.090) | 5/164 | NT | NA | noncoding (80/98 nt) | RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3706053 | NA (NA) | noncoding (91/98 nt) | RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP266 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
Only 100 of 260 total aligned reads displayed.
CAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGAT > NC_000913/3705944‑3706141 | cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAg < 2:314618/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAgcg > 2:2536623/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCa < 1:2319709‑M2/100‑2 (MQ=255) atttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCAt > 1:459037/9‑100 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCatc < 1:1823918‑M2/100‑4 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCatca > 1:2578396‑M2/1‑96 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCatcag < 1:2027936‑M2/100‑6 (MQ=255) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:141498/4‑100 (MQ=17) ntgCCGGAAGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATAGTGCAAATACAATACATTGCA‑GAAT‑CTCCGTAGGCCGGATAAGCGGAGCGCatcaggc < 2:1296808‑M2/99‑8 (MQ=255) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAgg > 1:1066213/3‑99 (MQ=21) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATgcgctccgcttatcaggc < 1:739240‑M1/100‑19 (MQ=255) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATgcgctccgcttatcaggc < 1:1186655‑M1/100‑19 (MQ=255) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATgcgctccgcttatcaggc < 1:1118506‑M1/100‑19 (MQ=255) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCatcaggc < 2:691183‑M2/100‑8 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:1574772/1‑100 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:1677161/1‑100 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa > 2:334523/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:1546718/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:628195/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGACGCATCCGACCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1523100/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1954102/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:478128/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑ACACGTAGGCCTGATAAGCGAAGCGCATCAGGCa > 1:2505895/2‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2426375/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 1:2377400/1‑99 (MQ=25) ccGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 2:2161661/1‑98 (MQ=18) cGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATgcgctccgcttatcaggcctac < 1:2065379‑M1/100‑23 (MQ=255) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:125044/7‑100 (MQ=18) ggATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATgcgctccgcttatcaggcctacg < 1:1738871‑M1/100‑24 (MQ=255) gataaggcgTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt < 1:478130/95‑1 (MQ=21) ataaggcgTTTACGCCTTATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGGGC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAatttta > 2:852679/5‑99 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:1203661/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:3156448/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 1:1655618/1‑100 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc < 2:592659/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:306408/100‑1 (MQ=255) ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt > 1:2129788/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:540356/100‑1 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATGCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 1:2282249/100‑1 (MQ=255) tAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa > 2:823393/1‑100 (MQ=255) aaCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAt < 1:388807/100‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:334525/100‑1 (MQ=255) ctccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCTTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:2961205/97‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 2:1595774/100‑1 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 2:407169/1‑100 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt < 2:2046065/100‑1 (MQ=255) aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:691184/100‑1 (MQ=255) cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 2:2269442/100‑1 (MQ=255) cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 2:1188646/100‑1 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg < 1:2917159/100‑1 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg < 2:284799/100‑1 (MQ=255) gCCTAT‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATgg < 2:3126902/100‑1 (MQ=255) gCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATgg < 2:3188983/100‑1 (MQ=255) cTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCt > 1:1621840/1‑100 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:1397043/1‑100 (MQ=255) c‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttn < 1:1296816/100‑2 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:2129773/100‑1 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTagatcggaa > 2:2420668/1‑92 (MQ=255) cAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 1:2813053/1‑100 (MQ=255) aaaTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 2:107808/100‑1 (MQ=255) tttCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 2:892118/99‑1 (MQ=255) aTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 1:2536641/100‑1 (MQ=255) aTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 1:1132154/100‑1 (MQ=255) ttCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga > 1:892122/1‑100 (MQ=255) cAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 2:1433791/100‑1 (MQ=255) aaTACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCTATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGAc > 2:1836600/1‑100 (MQ=255) ttGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc < 2:1505578/100‑1 (MQ=255) ttGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc > 1:847855/1‑100 (MQ=255) a‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:2502104/100‑1 (MQ=255) gAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgc < 1:3235040‑M2/100‑71 (MQ=255) aaT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg < 1:175134/100‑1 (MQ=255) t‑tttCGTAGGCCTAATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt < 1:2980725/100‑1 (MQ=255) tttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATTGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:1879458/95‑1 (MQ=255) tCGTAGGCCTGATAAGCGGAGCGCgtcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatc < 1:41579‑M2/100‑77 (MQ=255) tCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGtt < 1:1917657/100‑1 (MQ=255) cGTAGGCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgcagatcgg > 1:1513209‑M1/1‑30 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccg > 2:1654213‑M1/1‑29 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 1:1087684/100‑1 (MQ=255) tAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGTCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 2:1287815/99‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:3237295/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:96943/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:1671323/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:801972/100‑1 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggca > 2:3006009‑M1/1‑26 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggca > 2:1489341‑M1/1‑26 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt > 2:1572042/1‑100 (MQ=255) gCCTGATAAGCGTAGCGCatcaggcctacaaggtttctgcaatatattgaattagcacgattttgtaggccggataaggcgtttacgctgcatccggcat < 1:594502‑M2/100‑83 (MQ=255) gCCTGATAAGCGTAGCGCatcaggcctacaaggtttctgcaatatattgaattagcacgattttgtaggccggataaggcgtttacgccgcatccggcat < 2:90364‑M2/100‑83 (MQ=255) gCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcat < 2:96290‑M2/100‑83 (MQ=255) gCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcat < 1:1992686‑M2/100‑83 (MQ=255) gCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtagaccggataaggcgttaacgccgcatccggcat < 2:1618080‑M2/100‑83 (MQ=255) ccTGATgcgctccgcttatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcata < 2:56686‑M1/100‑95 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcata > 2:173377‑M1/1‑24 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa > 1:3180543/1‑100 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa > 1:2764506/1‑100 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa > 1:2673882/1‑100 (MQ=255) cTGATgcgctccgcttatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcataa > 1:1209698‑M1/1‑5 (MQ=255) gATgcgctccgcttatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcataaac < 1:1243170‑M1/100‑98 (MQ=255) gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt > 1:54405/1‑98 (MQ=255) tAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGAt < 2:17942/100‑1 (MQ=255) | CAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGAT > NC_000913/3705944‑3706141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |