New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4325806 =NA (NA)26 (0.230) 10/164 NT NA noncoding (5/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 4325838 = NA (NA)noncoding (37/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 247 total aligned reads displayed.

TTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAG  >  NC_000913/4325707‑4325905
                                                                                                   |                                                                                                   
cctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactg                                                                                                     >  1:1132337‑M1/100‑100 (MQ=255)
 tACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAggcggc                                                                                                    >  2:854396/1‑100 (MQ=255)
 tACAGGAAAAAGAGAGGAAGGGACTTAAAGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGTggcgg                                                                                                     <  1:473395/99‑1 (MQ=255)
  tgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactGcc                                                                                                   >  1:2944899‑M1/98‑100 (MQ=255)
   ccGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCt                                                                                                  >  2:439366/1‑100 (MQ=255)
    atgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactGCCTg                                                                                                 >  1:2656609‑M1/96‑100 (MQ=255)
     ggCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGa                                                                                                >  2:122891/1‑100 (MQ=255)
      gcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactGCCTGAt                                                                                               >  2:600611‑M1/94‑100 (MQ=255)
       cAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATa                                                                                              <  2:2066751/100‑1 (MQ=255)
        aaaaGAGAGGTAGGTACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGGGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATaa                                                                                             <  1:371928/100‑1 (MQ=255)
        aaaaGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATaa                                                                                             <  2:2529239/100‑1 (MQ=255)
         aaaGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAg                                                                                            >  1:1057822/1‑100 (MQ=255)
          aaGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGa                                                                                           <  2:478239/100‑1 (MQ=255)
           agagagGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGAc                                                                                          >  2:3202557/1‑100 (MQ=255)
                ggTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGAcgcgcg                                                                                     >  1:741013/1‑100 (MQ=255)
                ggTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGAcgcgcg                                                                                     >  1:2350803/1‑100 (MQ=255)
                ggTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGAcgcgcg                                                                                     <  2:2253023/100‑1 (MQ=255)
                ggTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGAcgcgc                                                                                      >  1:304448/1‑99 (MQ=255)
                  cgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactGCCTGATAAgacgcgcgcg                                                                                   <  2:2158669‑M1/19‑3 (MQ=255)
                    gggACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCg                                                                                 >  1:2035166/1‑100 (MQ=255)
                    gggACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGATAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCg                                                                                 <  2:2079739/100‑1 (MQ=255)
                        cTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGc                                                                             >  2:2770376/1‑100 (MQ=255)
                        cTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGc                                                                             >  1:1329864/1‑100 (MQ=255)
                         ttAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCa                                                                            <  1:2809547/100‑1 (MQ=255)
                          tAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCAt                                                                           >  2:1156338/1‑100 (MQ=255)
                           aaCGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATc                                                                          >  2:1855077/1‑100 (MQ=255)
                           aaCGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATc                                                                          >  2:2978608/1‑100 (MQ=255)
                              ggCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAgg                                                                       <  1:1856924/100‑1 (MQ=255)
                               gCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCTCGCGCGTCTTATCAGGc                                                                      <  1:781584/100‑1 (MQ=255)
                               gCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGc                                                                      <  1:667701/100‑1 (MQ=255)
                               gCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGc                                                                      <  2:2351303/100‑1 (MQ=255)
                               ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactGCCTGATAAGACGCGCGAGCGTCGCATCAGGc                                                                      >  1:638422‑M1/69‑100 (MQ=255)
                               ctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactGCCTGATAAGACGCGCAAGCGTCGCATCAGGc                                                                      <  1:2262401‑M1/32‑1 (MQ=255)
                                 acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaatggtgccgactGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAg                                                                    >  1:2327930‑M1/67‑100 (MQ=255)
                                 acaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacggtgccgactGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAg                                                                    >  1:551691‑M1/67‑100 (MQ=255)
                                  caaatttccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAg                                                                    >  1:2478026‑M1/66‑99 (MQ=255)
                                  caaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccaactGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGt                                                                   >  1:2386761‑M1/66‑100 (MQ=255)
                                   gataGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCTGCCTGATGCGACGCTCGCGCGTCTTATCAGGccgcc                                                                  <  1:2722516/100‑5 (MQ=21)
                                     attcccacaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCgg                                                                >  1:1299095‑M1/63‑100 (MQ=255)
                                      ttcccgcaccctccgtaggccggataaggcgtttacgccgcatccggcaacagtgccgactGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGc                                                               >  1:2158685‑M1/62‑100 (MQ=255)
                                      ggTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGc                                                               >  1:2920504/1‑100 (MQ=255)
                                        tGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCAc                                                             <  2:176259/100‑1 (MQ=255)
                                        tGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCAc                                                             <  1:2250802/100‑1 (MQ=255)
                                              cAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGc                                                       >  2:666467/1‑100 (MQ=255)
                                              cAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGc                                                       <  2:1565747/100‑1 (MQ=255)
                                               aGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGcc                                                      <  1:57563/100‑1 (MQ=255)
                                                gTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCg                                                     >  1:1610598/1‑100 (MQ=255)
                                                   aaGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGAt                                                  >  1:1022786/1‑100 (MQ=255)
                                                    agagAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATg                                                 >  2:491101/1‑100 (MQ=255)
                                                    agagAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATg                                                 >  2:1620881/1‑100 (MQ=255)
                                                     gagaAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgc                                                >  1:3092956/1‑100 (MQ=255)
                                                       gaAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATggg                                               >  2:2727411/1‑97 (MQ=255)
                                                        gccggataaggcgtttacgccgcatccggcaacagtgccgactGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgcggc                                             >  2:1472142‑M1/44‑100 (MQ=255)
                                                        aaGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATgcggc                                             >  1:2517868/1‑100 (MQ=255)
                                                          gCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGt                                           >  2:2820429/1‑100 (MQ=255)
                                                           ccAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTa                                          >  2:417490/1‑100 (MQ=255)
                                                             aGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTaaa                                        >  1:173802/1‑100 (MQ=255)
                                                              gTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAAc                                       >  2:141028/1‑100 (MQ=255)
                                                               ttAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACg                                      <  1:1804387/100‑1 (MQ=255)
                                                               cggtctgtgGTTCGAAATTTATACGGGTGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACCATTGCCGTATGCGGCGTAAAc                                       <  2:2002508/94‑1 (MQ=17)
                                                                tAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGc                                     >  2:2620715/1‑100 (MQ=255)
                                                                 aaGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGcc                                    >  2:548365/1‑100 (MQ=255)
                                                                 aaGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGcc                                    >  1:2423633/1‑100 (MQ=255)
                                                                 aaGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGcc                                    <  1:2510964/100‑1 (MQ=255)
                                                                 aaGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGcc                                    <  2:3149093/100‑1 (MQ=255)
                                                                 aaGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGcc                                    <  1:3220694/100‑1 (MQ=255)
                                                                    tgtAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTa                                 >  1:457545/1‑100 (MQ=255)
                                                                     gtAGTTCGAAATTTATACAGGTGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAAcagctcgg                                >  1:2002520/1‑93 (MQ=18)
                                                                       aGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCACTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTCTcc                              >  1:850643/1‑100 (MQ=255)
                                                                        gTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCg                             >  2:719554/1‑100 (MQ=255)
                                                                         ttCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGTAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCgg                            <  1:1751584/100‑1 (MQ=255)
                                                                           cGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGcc                          >  1:1437954/1‑100 (MQ=255)
                                                                           cGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGcc                          >  1:150555/1‑100 (MQ=255)
                                                                            gAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCt                         <  1:285602/100‑1 (MQ=255)
                                                                             aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                        >  2:29237/1‑100 (MQ=255)
                                                                             aaaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                        <  2:2862406/100‑1 (MQ=255)
                                                                              aaTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAc                       <  2:331053/100‑1 (MQ=255)
                                                                               aTTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCATAAACGCCTTATCCGGCCTACg                      <  2:328996/100‑1 (MQ=255)
                                                                                  tataCAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAg                   >  2:3110591/1‑100 (MQ=255)
                                                                                   ataCAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAgg                  >  1:2095735/1‑100 (MQ=255)
                                                                                    taCAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAggn                 <  2:2319709/100‑2 (MQ=255)
                                                                                    taCAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAggg                 <  2:1057817/100‑1 (MQ=255)
                                                                                      cAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTg               >  2:761696/1‑100 (MQ=255)
                                                                                         aTGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCgg            <  1:1620891/100‑1 (MQ=255)
                                                                                         aTGAGAGGCGGCCTGATAAGACACGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCgg            <  2:1804356/100‑1 (MQ=255)
                                                                                           gagaGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGa          <  2:2400067/100‑1 (MQ=255)
                                                                                            agagGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGaa         <  1:417492/100‑1 (MQ=255)
                                                                                             gagGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAt        >  1:2235759/1‑100 (MQ=255)
                                                                                               ggcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt      >  2:2177058/1‑100 (MQ=40)
                                                                                               ggcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAAttt      >  1:3237794/1‑100 (MQ=255)
                                                                                               ggcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTCTTGCCGGCTGCGGCGCAAGCGCCTTATTCGTCGCGCGGAGGGCGCgg            >  2:2217277/1‑94 (MQ=14)
                                                                                                gcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTg     <  1:122893/100‑1 (MQ=40)
                                                                                                gcggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTg     <  2:1066554/100‑1 (MQ=40)
                                                                                                 cggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGt    <  2:1981474/100‑1 (MQ=40)
                                                                                                  tgcCTGATGCGACGCTCGCGCGTCTTATCAGGCAGTCGGCACTGTTGTCGGATGCGGCGTAAACGCCGTATCCGGCCGGCGGTGGGTGCGGTaagagtg    >  2:3037933/2‑94 (MQ=2)
                                                                                                  ggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa   >  1:2612247/1‑100 (MQ=38)
                                                                                                  ggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTa   <  2:1381167/100‑1 (MQ=38)
                                                                                                  ggcCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTAAGGAGGGTGCGGGAATTTGTa   >  1:2550729/1‑100 (MQ=255)
                                                                                                   GCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg  >  1:1166838‑M1/1‑100 (MQ=255)
                                                                                                   GCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAg  >  2:168407‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTACCGGCAAAAGAGAGGTAGGGACTTAACGGCATGATGGTGACCTCAGTTAAGAGAAGCCAGTTAAGTGTAGTTCGAAATTTATACAGATGAGAGGCGGCCTGATAAGACGCGCGAGCGTCGCATCAGGCAGTCGGCACTGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAG  >  NC_000913/4325707‑4325905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.