BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4457231	NA (NA)	4 (0.040)	4/164	NT	NA	noncoding (47/84 nt)	REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 4457264	NA (NA)	4 (0.040)	4/164	NT	NA	noncoding (80/84 nt)	REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 153 total aligned reads displayed.

GCGAAGAAGGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCG  >  NC_000913/4457132‑4457330

   aagaagGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcc                                                                                                  >  1:2086548‑M1/1‑97 (MQ=255)

   aagaagGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcc                                                                                                  <  1:1162896‑M1/100‑4 (MQ=255)

     gaagGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctg                                                                                                <  1:1721488‑M1/100‑6 (MQ=255)

       agGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCCGATATAGTACACGTAAGCCGGATAAGGCGATCACGCCGCATCCGGCAATTAAGCATACTGCCt                                                                                                 >  1:476164/1‑97 (MQ=25)

       agGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgat                                                                                              <  1:2114497‑M1/100‑8 (MQ=255)

       agGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgat                                                                                              <  2:705709‑M1/100‑8 (MQ=255)

       aagCGGAAGCTGCGCAGTAATTCACAGCCTCAGCCTGATAGAGTGTGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTg                                                                                                >  2:1514933/3‑100 (MQ=16)

        ggCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATg                                                                                             <  1:695674/100‑1 (MQ=255)

         gCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                                                            <  2:1288855/100‑1 (MQ=255)

         gCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                                                            <  2:3127610/100‑1 (MQ=255)

         gCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                                                            >  1:1826038/1‑100 (MQ=255)

         gCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                                                            <  2:1817112/100‑1 (MQ=255)

          cggaatgagcgcAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCg                                                                                           <  1:2773066/92‑1 (MQ=255)

           ggAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGa                                                                                          >  2:1484932/1‑100 (MQ=255)

           ggAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGa                                                                                          >  2:2780252/1‑100 (MQ=255)

            gAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGa                                                                                          >  2:2601446/1‑99 (MQ=255)

             aaGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACg                                                                                        >  2:2485318/1‑100 (MQ=255)

                ccGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcat                                                                                     >  1:117853‑M1/1‑84 (MQ=255)

                ccGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCtt                                                                                     <  1:1484940/100‑1 (MQ=255)

                ccGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCtt                                                                                     >  2:2478433/1‑100 (MQ=255)

                 cgcgCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTg                                                                                    <  2:1203818/100‑1 (MQ=255)

                 cgcgCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTg                                                                                    <  2:2879577/100‑1 (MQ=255)

                    gcAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATg                                                                                 <  1:391741/100‑1 (MQ=255)

                    gcAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATg                                                                                 <  2:3050554/100‑1 (MQ=255)

                    gcAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATg                                                                                 <  1:1154328/100‑1 (MQ=255)

                     cAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGc                                                                                <  2:1840494/100‑1 (MQ=255)

                       gTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGt                                                                              >  1:1933107/1‑100 (MQ=255)

                          aTT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGGCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCtt                                                                           <  1:2803041/100‑1 (MQ=255)

                          aTT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCtt                                                                           <  2:2997658/100‑1 (MQ=255)

                               cGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATC                                                                        >  1:1081216‑M2/1‑100 (MQ=255)

                               cGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATC                                                                        >  1:2839726‑M2/1‑100 (MQ=255)

                               cGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTAT                                                                         >  1:208167‑M2/1‑99 (MQ=255)

                                gtccTTAGCCAAATATAGTATGCGTAGGCCGGATAATGCGTTCACGTCGCATCTGTCATTTTAGCATAGTGCCTGATTCGACGCTTGATGCGTCt                                                                            <  2:2594480/93‑1 (MQ=255)

                                  ccTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGG                                                                     >  1:2704659‑M2/1‑100 (MQ=255)

                                   cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggc                                                                    <  1:802594‑M1/100‑34 (MQ=255)

                                   cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGC                                                                    <  2:2544737‑M2/100‑1 (MQ=255)

                                    ttAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc                                                                   <  2:1391719/100‑1 (MQ=255)

                                    ttAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc                                                                   <  2:2327207/100‑1 (MQ=255)

                                     tAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggcac                                                                  <  2:117851‑M1/100‑36 (MQ=255)

                                     tAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCt                                                                  <  2:2574684/100‑1 (MQ=255)

                                     tAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCt                                                                  >  1:2294113/1‑100 (MQ=255)

                                     tAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCt                                                                  >  1:931573/1‑100 (MQ=255)

                                      agtcAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTa                                                                 <  1:3015593/97‑1 (MQ=255)

                                       gCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCttc                                                                <  1:2189780/100‑3 (MQ=255)

                                       gCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTAc                                                                <  1:1647723/100‑1 (MQ=255)

                                       gCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTAc                                                                >  2:192114/1‑100 (MQ=255)

                                        ccAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACa                                                               <  1:3183065/100‑1 (MQ=255)

                                        ccAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACa                                                               >  1:524018/1‑100 (MQ=255)

                                          aGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAgg                                                             <  1:3129495/100‑1 (MQ=255)

                                             tataGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGc                                                          >  1:765088/1‑100 (MQ=255)

                                               taGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCAc                                                        >  2:683080/1‑100 (MQ=255)

                                               taGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCAc                                                        <  2:1574504/100‑1 (MQ=255)

                                                aGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCAcc                                                       <  1:316383/100‑1 (MQ=255)

                                                 gTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCg                                                      <  1:131002/100‑1 (MQ=255)

                                                   aTGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTa                                                    <  2:3139021/100‑1 (MQ=255)

                                                    ctcaaatgCCGGATGCGGCGTGAACGCCTTATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTAt                                                   >  2:824296/8‑100 (MQ=18)

                                                     gCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATc                                                  <  1:118932/100‑1 (MQ=255)

                                                     gCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATc                                                  >  2:1445852/1‑100 (MQ=255)

                                                      cGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATcc                                                 <  2:347415/100‑1 (MQ=255)

                                                       gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCg                                                >  1:1530948/1‑100 (MQ=255)

                                                         aGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGc                                              <  2:393711/100‑1 (MQ=255)

                                                         aGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGc                                              <  1:177407/100‑1 (MQ=255)

                                                          ggCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATGGTGCCTGATGCGACGCTTGGTGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCa                                             >  2:1771470/1‑100 (MQ=255)

                                                          ggCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCa                                             >  1:1486797/1‑100 (MQ=255)

                                                          ggCAGGATAAGGCTTTCACGCGGCATCCGGTATTTGGGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCTGGCGTACAGGTGCACCGTAGCCGGc                                              <  2:2184734/99‑1 (MQ=21)

                                                            ccGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCaaa                                           >  2:938614/1‑100 (MQ=255)

                                                             cGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAAc                                          <  2:2086533/100‑1 (MQ=255)

                                                                 tAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATa                                      >  1:1463761/1‑100 (MQ=255)

                                                                  aaGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATAc                                     <  1:1727044/100‑1 (MQ=255)

                                                                   aGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACt                                    >  2:57783/1‑100 (MQ=255)

                                                                    ggCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTc                                   <  1:2921060/100‑1 (MQ=255)

                                                                     gCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGTCTACAGGTGCACCGTATCCGGCAAACCATACTca                                  <  2:1268731/100‑1 (MQ=255)

                                                                     gCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTca                                  <  2:496087/100‑1 (MQ=255)

                                                                      cGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTcan                                 <  1:2601467/100‑2 (MQ=255)

                                                                         tCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATc                              >  2:12105/1‑100 (MQ=255)

                                                                          cACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATca                             >  1:1435645/1‑100 (MQ=255)

                                                                          cACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATca                             >  2:1134216/1‑100 (MQ=255)

                                                                           aCGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATcaa                            >  1:2219668/1‑100 (MQ=255)

                                                                                    ccGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGaaaa                   >  1:183062/1‑100 (MQ=255)

                                                                                     cGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACCTCAACAACGAAAAt                  >  1:2821064/1‑100 (MQ=255)

                                                                                     cGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAt                  >  1:815309/1‑100 (MQ=255)

                                                                                     cGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAt                  >  1:3254020/1‑100 (MQ=255)

                                                                                     cGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAt                  >  1:1307421/1‑100 (MQ=255)

                                                                                     cGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAt                  >  2:2855687/1‑100 (MQ=255)

                                                                                      ggCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAtt                 >  1:1146164/1‑100 (MQ=255)

                                                                                      ggCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAtt                 <  2:815307/100‑1 (MQ=255)

                                                                                         aTTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTAcc              <  1:607481/100‑1 (MQ=255)

                                                                                          tttGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTAccc             <  2:683075/100‑1 (MQ=255)

                                                                                           ttGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCt            <  1:2013479/100‑1 (MQ=255)

                                                                                             gAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTc          <  1:2485334/100‑1 (MQ=255)

                                                                                               gCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCactatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgcatactatatct        <  1:2770578‑M2/100‑61 (MQ=255)

                                                                                                 aTAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTtc      >  1:939732/1‑100 (MQ=255)

                                                                                                 aTAGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGTCTAAAGTTGCAACGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGt        <  2:746052/98‑1 (MQ=37)

                                                                                                  tAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTtct     >  1:2946184/1‑100 (MQ=255)

                                                                                                   aGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTtctc    >  1:2567763/1‑100 (MQ=255)

                                                                                                   aGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCGACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTtctc    >  2:1735029/1‑100 (MQ=255)

                                                                                                    gTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTcc   <  2:1626299/100‑1 (MQ=255)

                                                                                                    gTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTcc   <  2:947487/100‑1 (MQ=255)

                                                                                                     tGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCg  <  2:931568/100‑1 (MQ=255)

                                                                                                     tGCCGGATGCGGCGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCg  >  2:2019672/1‑100 (MQ=255)

GCGAAGAAGGCGGAAGCCGCGCAGTAATT‑‑CGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCG  >  NC_000913/4457132‑4457330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.