New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4614607NA (NA)7 (0.060) 7/164 NT NA noncoding (351/388 nt) REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 = 4614640 NA (NA)noncoding (384/388 nt) REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 180 total aligned reads displayed.

CTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATC  >  NC_000913/4614509‑4614704
                                                                                                  |                                                                                                 
cTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCTGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATg                                                                                                  >  2:2282669‑M1/1‑99 (MQ=255)
  gATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcc                                                                                                >  2:1714629‑M1/1‑97 (MQ=255)
   aTGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcct                                                                                               <  2:1269889‑M1/100‑5 (MQ=255)
    tGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctg                                                                                              >  2:1293698‑M1/1‑95 (MQ=255)
    tGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctg                                                                                              <  1:328245‑M1/100‑6 (MQ=255)
          gcgtGTCACGTCTTATCATGCATACAGGTTTGTGCCGAACCGTATGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGc                                                                                          <  1:1116049/95‑1 (MQ=11)
            atctCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACg                                                                                      <  1:1462401/97‑1 (MQ=25)
              gTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCt                                                                                    <  1:1035028/100‑1 (MQ=35)
              gTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAAGCCGGATAAGGCGCTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCt                                                                                    >  2:953886/1‑100 (MQ=255)
                cgcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctgataagacgcgtc                                                                                  >  2:2185392‑M1/1‑83 (MQ=255)
                cgcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACgagat                                                                                  >  2:1462393/1‑96 (MQ=18)
                cgcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTg                                                                                  >  2:253124/1‑100 (MQ=33)
                cgcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTg                                                                                  <  1:2595927/100‑1 (MQ=33)
                  cgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGa                                                                                 <  1:882952/99‑1 (MQ=35)
                  cgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAc                                                                                >  1:2208782/1‑100 (MQ=35)
                    tcctATCCTCCCTACTGGTCCGTGCCGAGCCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcg                                                                               <  2:2037160/96‑1 (MQ=11)
                    tCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgc                                                                              >  1:1879787/1‑100 (MQ=38)
                     cTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgcg                                                                             <  2:475665/100‑1 (MQ=38)
                     cTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgcg                                                                             <  2:1568403/100‑1 (MQ=38)
                     cTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgcg                                                                             <  1:1295163/100‑1 (MQ=38)
                       tATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTc                                                                           <  2:3115112/100‑1 (MQ=38)
                       tATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTc                                                                           <  2:2861455/100‑1 (MQ=35)
                          cATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTA                                                                        <  1:286365‑M2/100‑1 (MQ=255)
                          cATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTAGatcggaagag                                                                        >  2:3143394/1‑91 (MQ=11)
                            tGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctgataagacgcgtcaagcgtcgcatc                                                                      <  2:227317‑M1/100‑30 (MQ=255)
                            tGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATC                                                                      <  1:933369‑M2/100‑1 (MQ=255)
                              ccTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAG                                                                    <  2:2693403‑M2/100‑1 (MQ=255)
                               cTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctgataagacgcgtcaagcgtcgcatcagg                                                                   <  2:2100655‑M1/100‑33 (MQ=255)
                               cTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                   >  1:1176071‑M2/1‑100 (MQ=255)
                                tACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGC                                                                  >  2:540193‑M2/1‑100 (MQ=255)
                                 aCAGGTTTGTGCCGAACCGTAGGCCGGATTAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATTCCTGATGCGACGCTTGACGCGTCTTATCAGGcc                                                                 <  2:1954823/100‑1 (MQ=255)
                                 aCAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGcc                                                                 <  2:1597019/100‑1 (MQ=255)
                                 aCAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGcc                                                                 <  1:3102641/100‑1 (MQ=255)
                                  cAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCt                                                                <  1:1798359/100‑1 (MQ=40)
                                  cAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCt                                                                <  2:1924895/100‑1 (MQ=255)
                                  cAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCt                                                                <  2:865783/100‑1 (MQ=255)
                                   aGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctgataagacgcgtcaagcgtcgcatcaggcatt                                                               <  1:1437432‑M1/100‑37 (MQ=255)
                                    ggTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc                                                              >  2:177867/1‑100 (MQ=255)
                                     gTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACa                                                             >  2:1725308/1‑100 (MQ=255)
                                     gTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACa                                                             >  1:1005337/1‑100 (MQ=40)
                                     gTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACa                                                             <  1:800464/100‑1 (MQ=255)
                                      tttGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctgattagacgcgtcaagcgtcgtatcaggcattgtg                                                            <  1:2185408‑M1/100‑40 (MQ=255)
                                       ttGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAg                                                           <  1:658424/100‑1 (MQ=255)
                                       ttGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAg                                                           >  2:1837148/1‑100 (MQ=40)
                                         gtgCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTc                                                         <  1:2896595/100‑1 (MQ=255)
                                         gtgCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTc                                                         >  2:2168682/1‑100 (MQ=40)
                                         gtgCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTc                                                         >  2:2583861/1‑100 (MQ=255)
                                         gtgCCGAACCGTACGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATgcctgataagacgcgtcaagcgtcgcatcaggcattg                                                              <  2:3100139‑M1/95‑38 (MQ=255)
                                           gCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCtg                                                       >  2:734641/1‑100 (MQ=255)
                                            ccGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCtgt                                                      >  1:485115/1‑100 (MQ=255)
                                            ccGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCtgn                                                      <  2:2740729/100‑2 (MQ=255)
                                             cGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCtgtg                                                     <  2:55642/100‑1 (MQ=255)
                                              gAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGc                                                    >  2:2913349/1‑100 (MQ=17)
                                               aaCTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGcc                                                   <  2:666919/100‑1 (MQ=255)
                                               aaCAGTCGGTCGGATAAGGCGTTTGCGCCGCTTCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACa                                                             <  2:2401949/90‑1 (MQ=14)
                                                aCCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCg                                                  >  1:3062203/1‑100 (MQ=255)
                                                 ccGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGcc                                                   >  2:1672483/1‑98 (MQ=255)
                                                 ccGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGa                                                 >  1:824520/1‑100 (MQ=40)
                                                   gTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAAc                                               <  2:256605/100‑1 (MQ=40)
                                                   gTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAAc                                               <  2:1836256/100‑1 (MQ=255)
                                                   gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAAc                                               <  1:2913374/100‑1 (MQ=18)
                                                      ggCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGt                                            >  1:120530/1‑100 (MQ=255)
                                                      ggCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGt                                            >  1:2273803/1‑100 (MQ=255)
                                                      ggCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGt                                            >  1:2802160/1‑100 (MQ=255)
                                                       gacGGATCAGGCGTTCGAGCCGGCTAAAGCAGTTGGCGCACAATGCCTGACGCGACGCTTTTCGGCTCTTATCAGTCCTACAAGTGTATGccta                                                 >  2:2239114/3‑92 (MQ=2)
                                                       gCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTa                                           <  1:2085073/100‑1 (MQ=40)
                                                         cGGATAAGGCGTTCGCGCCGCATCTGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAgg                                         <  1:1293706/100‑1 (MQ=255)
                                                         cGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAgg                                         >  2:822516/1‑100 (MQ=255)
                                                          ggATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGc                                        <  1:1890885/100‑1 (MQ=255)
                                                          ggATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGc                                        >  2:749485/1‑100 (MQ=40)
                                                          ggATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGAGCCGAACCGTAGGc                                        <  2:1688154/100‑1 (MQ=255)
                                                                ggCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATc                                  >  2:494654/1‑100 (MQ=255)
                                                                  cGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCg                                <  2:2060290/100‑1 (MQ=255)
                                                                   gTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCgg                               >  1:1911787/1‑100 (MQ=255)
                                                                   gTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCgg                               <  2:1176023/100‑1 (MQ=255)
                                                                    ttCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGc                              <  2:549356/100‑1 (MQ=255)
                                                                    ttCGCGCCGCATCCGGCAGTTGGCGCACAATGCCGGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGc                              <  1:1358064/100‑1 (MQ=255)
                                                                     tCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCa                             <  1:2428058/100‑1 (MQ=255)
                                                                     tCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCa                             <  2:1230495/100‑1 (MQ=255)
                                                                     tCGAGCCGCATACGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGc                              <  1:170734/99‑1 (MQ=255)
                                                                      cgcgCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCAt                            <  1:520975/100‑1 (MQ=255)
                                                                       gggccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATg                           <  2:1966687/98‑1 (MQ=255)
                                                                       gcgcCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGTCGTATCCGGCATg                           <  2:2011971/100‑1 (MQ=255)
                                                                            gcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTcaca                      <  1:3027152/100‑1 (MQ=255)
                                                                            gcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTcaca                      <  2:2897617/100‑1 (MQ=255)
                                                                              aTCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACaaa                    <  1:433642/100‑1 (MQ=255)
                                                                               tCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAAt                   <  1:1493566/100‑1 (MQ=255)
                                                                               tCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAAt                   <  1:253126/100‑1 (MQ=255)
                                                                                ccGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATa                  <  1:1635663/100‑1 (MQ=255)
                                                                                 cGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATag                 >  1:2458264/1‑100 (MQ=255)
                                                                                      gTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAgcgc            >  1:1553064/1‑100 (MQ=255)
                                                                                         ggCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCgg         <  1:2329476/100‑1 (MQ=255)
                                                                                          gcgcACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGa        >  2:10593/1‑100 (MQ=255)
                                                                                          gcgcACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGa        <  1:2706183/100‑1 (MQ=255)
                                                                                             cacaATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATATCACAAATAGAGCGCCGGAAat     <  2:1879775/100‑1 (MQ=255)
                                                                                             cacaATGCCTGATACGACGCTTGACGCGTCTAATCAGGCattgtgcgccaactgccggatgcggcgcgaacgccttatccggcctacggttcggcacaaa     <  1:2185408‑M2/100‑62 (MQ=255)
                                                                                              acaATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAata    <  1:734642/100‑1 (MQ=255)
                                                                                              acaATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAata    >  1:2092202/1‑100 (MQ=255)
                                                                                               caATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCattgtgcgccaactgccggatgcggcgcgaacgccttatccggcgtacggttcggcac        <  2:3100139‑M2/95‑59 (MQ=255)
                                                                                               caATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAatat   >  2:2378187/1‑100 (MQ=255)
                                                                                                  |                                                                                                 
CTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATC  >  NC_000913/4614509‑4614704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.