New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627204104 (0.870)5 (0.050) 5/162 NT 4.8% coding (1293/1383 nt) radA DNA repair protein
?NC_000913 = 4627223 105 (0.960)coding (1312/1383 nt) radA DNA repair protein
Rejected: Frequency below cutoff threshold.

Only 100 of 149 total aligned reads displayed.

TGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATA  >  NC_000913/4627105‑4627303
                                                                                                   |                                                                                                    
tGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCG                                                                                                      <  2:1927882‑M1/100‑1 (MQ=255)
tGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCG                                                                                                      <  2:1927679‑M1/100‑1 (MQ=255)
tGAAGTCGGGCTGGCAGGGGAGATCAGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCG                                                                                                      <  1:474171‑M1/100‑1 (MQ=255)
 gAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCcggcgg                                                                                                     <  1:1258000/100‑1 (MQ=255)
  aaGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCggcggc                                                                                                    <  1:2558425/100‑1 (MQ=255)
  aaGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCggcggc                                                                                                    <  1:1625046/100‑1 (MQ=255)
  aaGTCGGGCTGGCAGGGGAGATCCGCACGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCggcggc                                                                                                    <  1:1617202/100‑1 (MQ=255)
    gTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCt                                                                                                   >  2:1177084/1‑99 (MQ=255)
       gggCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACg                                                                                               <  2:146466/100‑1 (MQ=255)
          cTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGc                                                                                            >  1:283828/1‑100 (MQ=255)
            ggCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCg                                                                                          >  2:2626894/1‑100 (MQ=255)
              cAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGATTTTCGTCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑aa                                                                                       >  2:2282056/1‑100 (MQ=255)
                ggggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑aaaa                                                                                     >  1:884471/1‑100 (MQ=255)
                ggggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑aaaa                                                                                     <  1:3184963/100‑1 (MQ=255)
                 gggAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑aaaaa                                                                                    >  1:3212130/1‑100 (MQ=255)
                   gagaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAg                                                                                  <  2:2260683/100‑1 (MQ=255)
                    agaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGc                                                                                 <  1:1011640‑M2/100‑2 (MQ=255)
                     gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGcg                                                                                >  2:1576363‑M2/1‑98 (MQ=255)
                     gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGc                                                                                 <  1:886896‑M2/99‑2 (MQ=255)
                     gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTGTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAg                                                                                  <  2:246816/98‑1 (MQ=255)
                       tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGcgcc                                                                              <  1:752879‑M2/100‑5 (MQ=255)
                       tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACATGCCG‑AAAAAAGcgcc                                                                              <  1:1539896‑M2/100‑5 (MQ=255)
                         cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGTCGATTGTTCCGGCGcttttttcggcacgttagccgccgg                                                                             <  2:160552‑M1/100‑26 (MQ=255)
                             cGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgccggaaca                                                                         <  1:1589806‑M1/100‑30 (MQ=255)
                              ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAggg                                                                       <  2:884467/100‑1 (MQ=255)
                              ggTGCCAAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAggg                                                                       <  2:2905847/100‑1 (MQ=255)
                               gTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGa                                                                      <  1:2347917/100‑1 (MQ=255)
                                tGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGcttttttcggcacgttagccgccggaacaatc                                                                      <  2:732224‑M1/100‑33 (MQ=255)
                                tGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGa                                                                      <  1:158216/99‑1 (MQ=255)
                                 gCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATg                                                                    <  1:985828/100‑1 (MQ=255)
                                  cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGc                                                                   >  2:2339679/1‑100 (MQ=255)
                                   ccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCa                                                                  >  2:1690206/1‑100 (MQ=255)
                                       aggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCAGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGAtt                                                              >  2:2282604/2‑100 (MQ=255)
                                        ggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGAttt                                                             >  2:3149485/1‑100 (MQ=255)
                                         gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGAtttt                                                            >  1:1032776/1‑100 (MQ=255)
                                         gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGAtttt                                                            <  1:856116/100‑1 (MQ=255)
                                         gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGAtttt                                                            >  1:1094038/1‑100 (MQ=255)
                                           cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                          >  1:254830/1‑100 (MQ=255)
                                           cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                          <  1:149210/100‑1 (MQ=255)
                                           cAGGAACGAATCTCTCAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                          <  1:3194958/100‑1 (MQ=255)
                                             ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                        >  1:2542511/1‑100 (MQ=255)
                                             ggAACGAATCTCTGAAGAGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAGCGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                        >  2:2164046/1‑100 (MQ=255)
                                              gAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                       >  2:3170011/1‑100 (MQ=255)
                                               aaCGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGt                                                      >  2:1727617/1‑100 (MQ=255)
                                                 cGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTa                                                    <  2:209876/100‑1 (MQ=255)
                                                   aaTCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGtt                                                     <  2:331218/97‑1 (MQ=255)
                                                     tctcTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaaaa                                                <  2:1243062/100‑1 (MQ=255)
                                                      ctctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaaaaa                                               >  2:2743348/1‑100 (MQ=255)
                                                       tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                              >  2:2024483/1‑100 (MQ=255)
                                                          gAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAActct                                           >  2:2486425/1‑100 (MQ=255)
                                                          gAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAActct                                           >  2:181549/1‑100 (MQ=255)
                                                            aGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                         >  1:1880101/1‑100 (MQ=255)
                                                            aGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                         >  1:2712145/1‑100 (MQ=255)
                                                            aGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                         <  1:2408236/100‑1 (MQ=255)
                                                             gcggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCg                                        >  2:354291/1‑100 (MQ=255)
                                                               ggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAc                                      <  2:3115242/100‑1 (MQ=255)
                                                                 cgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgc                                    >  1:1214436/1‑100 (MQ=255)
                                                                 cgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgc                                    <  1:631434/100‑1 (MQ=255)
                                                                   aaaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACgcgc                                  <  1:2522262/100‑1 (MQ=255)
                                                                      cacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTa                               >  1:2665017/1‑100 (MQ=255)
                                                                       acGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAg                              <  2:874143/100‑1 (MQ=255)
                                                                         ggTTTTCGCCGGGCGATTGTTCCGGCGGTTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                            <  2:1776614/100‑1 (MQ=255)
                                                                         ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGc                             <  1:2662259/99‑1 (MQ=255)
                                                                         ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                            >  2:1562219/1‑100 (MQ=255)
                                                                          gTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgt                           <  1:2251815/100‑1 (MQ=255)
                                                                             ttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgtgt                         <  1:1582363/99‑1 (MQ=255)
                                                                              tCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTc                       <  1:2290903/100‑1 (MQ=255)
                                                                              gcGCCGGGAGATTTTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAATATCTCTCCGACGCGCTTAGCg                            <  2:2837860/94‑1 (MQ=255)
                                                                               cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                      >  2:1253614/1‑100 (MQ=255)
                                                                               cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                      <  2:51604/100‑1 (MQ=255)
                                                                                 ccGGGGGATTGTTCCGGCGGCTAACGTGCCGAAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                      <  1:2626915/99‑1 (MQ=255)
                                                                                   gggCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacga                  >  2:1531937/1‑100 (MQ=255)
                                                                                    ggCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCgacgac                 >  1:2079396/1‑100 (MQ=255)
                                                                                      cGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACtt               >  1:79021/1‑100 (MQ=255)
                                                                                      cGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACtt               >  1:1474236/1‑100 (MQ=255)
                                                                                       gATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggca              <  2:732224‑M2/100‑69 (MQ=255)
                                                                                       gATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCTGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTta              <  1:2282620/100‑1 (MQ=255)
                                                                                       gATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTta              >  1:1968774/1‑100 (MQ=255)
                                                                                       gATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTta              >  2:2025624/1‑100 (MQ=255)
                                                                                        aTTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcac             <  2:2026376‑M2/100‑70 (MQ=255)
                                                                                        aTTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGAACCGTAACGGCAGCAGATATTTGGCGTTAAAAAACACTACGACTCGCATAGCTTGTTCGACGACTtat             >  2:434726/1‑100 (MQ=255)
                                                                                         ttGTTCCGGCGGCTAACGTGCCG‑AAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcacc            <  1:1674139‑M2/100‑71 (MQ=255)
                                                                                         ttGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtata            <  2:2739255/100‑1 (MQ=255)
                                                                                          tGTTCTGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTACGACGCGCTTAGCGTGTTCGACGACTTATaa           >  2:2544645/1‑100 (MQ=255)
                                                                                          tGTTCCGGCGGCTAACGTGCCG‑AAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccg           <  1:1589806‑M2/100‑72 (MQ=255)
                                                                                           gTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATaa           >  1:2828291/1‑99 (MQ=255)
                                                                                             tCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga        >  2:2987101/1‑100 (MQ=255)
                                                                                             tCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga        >  1:2447885/1‑100 (MQ=255)
                                                                                              ccGGCGcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcg        <  1:2418083‑M1/100‑95 (MQ=255)
                                                                                              ccGGCGGCTAACGTGCCG‑AAAAAAGcgccggaacaatcgaccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcg       <  2:160552‑M2/100‑76 (MQ=255)
                                                                                              ccGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag       <  1:1690218/100‑1 (MQ=255)
                                                                                              ccGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag       >  2:3087728/1‑100 (MQ=255)
                                                                                               cggcggCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgaga      <  2:283826/100‑1 (MQ=255)
                                                                                               cGGCGcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcgg       >  1:2390037‑M1/1‑5 (MQ=255)
                                                                                                ggcggcTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAAGCGCTTAGCGTGTTCGACGACTTATAATGAGat     >  2:1492804/1‑100 (MQ=255)
                                                                                                ggCGcttttttcggcatgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcgga      <  1:1539896‑M1/100‑97 (MQ=255)
                                                                                                ggCGcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcgga      <  1:1374292‑M1/100‑97 (MQ=255)
                                                                                                  cgcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcggatc    <  2:1604154‑M1/100‑99 (MQ=255)
                                                                                                   gctttttttggcacgttagccgccggaacaatggcccggcgaaaaccgtgttgcgccgcttcagagattcgttcctgaccgctgggcaccgggcg        <  2:2657620‑M1/95‑95 (MQ=255)
                                                                                                   gcttttttcggcacgttagccgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcggatct   <  1:1011640‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                    
TGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATA  >  NC_000913/4627105‑4627303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.