New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3217434 =NA (NA)7 (0.060) 5/164 NT NA noncoding (1/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3217467 = NA (NA)noncoding (34/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 163 total aligned reads displayed.

ACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGT  >  NC_000913/3217368‑3217565
                                                                                                   |                                                                                                  
ggagcacaatgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtagcgggtgtagGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                    >  2:517146‑M1/67‑100 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                    <  1:1032385/100‑1 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                    <  2:481394/100‑1 (MQ=255)
 ccGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCt                                                                                                   >  2:1493773/1‑100 (MQ=255)
 ccGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCt                                                                                                   >  1:167321/1‑100 (MQ=255)
      ccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAcc                                                                                              <  2:197498/100‑1 (MQ=255)
      ccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAcc                                                                                              <  1:949807/100‑1 (MQ=255)
           tttGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTa                                                                                         <  2:1005634/100‑1 (MQ=255)
            ttGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTac                                                                                        <  2:317263/100‑1 (MQ=255)
             tGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTaca                                                                                       <  2:2424219/100‑1 (MQ=255)
              gATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacac                                                                                      <  1:2119289/100‑1 (MQ=255)
               atatTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacaca                                                                                     >  1:2012044/1‑100 (MQ=255)
                tatTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacacac                                                                                    >  2:2370678/1‑100 (MQ=255)
                tatTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacacac                                                                                    >  2:1793227/1‑100 (MQ=255)
                tatTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacacac                                                                                    <  1:1302350/100‑1 (MQ=255)
                   tACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACAcccc                                                                                 >  2:98346/1‑100 (MQ=255)
                     cGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGc                                                                               >  2:356696/1‑100 (MQ=255)
                     cGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGc                                                                               <  1:1545786/100‑1 (MQ=255)
                     cGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGc                                                                               <  2:1484001/100‑1 (MQ=255)
                      gCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCCCa                                                                              >  2:589386/1‑100 (MQ=255)
                       cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCa                                                                              >  1:906188/1‑99 (MQ=255)
                       cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAg                                                                             >  2:617925/1‑100 (MQ=255)
                       cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAg                                                                             >  2:803222/1‑100 (MQ=255)
                        aaCTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGTGCCTTATCCGGCCTACACCCGCTACACACCCCGCAgg                                                                            <  2:1729122/100‑1 (MQ=255)
                        aaCTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAgg                                                                            <  1:1247672/100‑1 (MQ=255)
                          cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGcc                                                                          >  1:438963/1‑100 (MQ=255)
                          cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGcc                                                                          >  2:1901210/1‑100 (MQ=255)
                          cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGcc                                                                          >  1:2248283/1‑100 (MQ=255)
                          cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGcc                                                                          >  1:2313675/1‑100 (MQ=255)
                            ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTg                                                                        <  1:63379/100‑1 (MQ=255)
                            ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTg                                                                        >  2:753227/1‑100 (MQ=255)
                             gATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACAGACCCCGCAGGCCTGa                                                                       >  1:3198668/1‑100 (MQ=255)
                              aTTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGAt                                                                      <  2:3174822/100‑1 (MQ=255)
                                 aaTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAg                                                                   <  2:1970151/100‑1 (MQ=255)
                                 aaTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAg                                                                   >  2:2994129/1‑100 (MQ=255)
                                  aTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGa                                                                  >  1:2114623/1‑100 (MQ=255)
                                    cgccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATg                                                                <  1:2994156/100‑1 (MQ=255)
                                     gccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCACGCCTGATAAGATgc                                                               >  2:1121004/1‑100 (MQ=255)
                                      ccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATgcg                                                              >  2:798440/1‑100 (MQ=255)
                                      ccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATgcg                                                              >  2:1798883/1‑100 (MQ=255)
                                        gcATCCGCGAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACATCCCGCTGGCCTGATAAGATGCGcc                                                            <  2:118945/100‑1 (MQ=255)
                                           tCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgc                                                         <  1:703206/100‑1 (MQ=255)
                                            ccGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgca                                                        >  2:2469698/1‑100 (MQ=255)
                                            ccGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgca                                                        <  1:1793239/100‑1 (MQ=255)
                                            ccGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgca                                                        >  2:501347/1‑100 (MQ=255)
                                             cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                       >  1:2501734/1‑100 (MQ=255)
                                             cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                       >  1:1126805/1‑100 (MQ=255)
                                              gCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatc                                                      <  1:1493781/100‑1 (MQ=255)
                                              gCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatc                                                      >  2:2464609/1‑100 (MQ=255)
                                               ccAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcg                                                     >  1:2916999/1‑100 (MQ=255)
                                               ccAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcg                                                     <  2:1442650/100‑1 (MQ=255)
                                               ccAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcg                                                     >  1:1733109/1‑100 (MQ=255)
                                                      cgcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAgg                                              <  1:322175/100‑1 (MQ=255)
                                                       gcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGc                                             <  1:847622/100‑1 (MQ=255)
                                                         ggTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCAt                                           <  2:1671643/100‑1 (MQ=255)
                                                            gCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtgt                                        >  1:2625749/1‑100 (MQ=255)
                                                             cAATTGCCGTATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATACGATGCGCCAGCATCGCATCAGGCATtgt                                        <  1:1901222/99‑1 (MQ=255)
                                                             cAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtgtg                                       >  2:2447481/1‑100 (MQ=255)
                                                               taggccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCt                                     >  2:3231797‑M2/37‑100 (MQ=255)
                                                               aTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCt                                     >  2:274481/1‑100 (MQ=255)
                                                                 tGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                   >  2:391270/1‑100 (MQ=255)
                                                                 ggccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTc                                    >  1:1478948‑M2/35‑99 (MQ=255)
                                                                  GCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCa                                  >  2:3157143‑M1/1‑100 (MQ=255)
                                                                   ccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                 >  1:1790986‑M2/33‑100 (MQ=255)
                                                                    CGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAc                                >  2:2628539‑M1/1‑100 (MQ=255)
                                                                    CGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAc                                <  1:2645362‑M1/100‑1 (MQ=255)
                                                                     GGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAcc                               >  2:2979938‑M1/1‑100 (MQ=255)
                                                                      aataaggcgcgtcaagcgtcgcatccggcCTACACCCGCGACAGACCCCGCAGGCCTTATAAGATGCGCCAGCATCGCATCATGCATTGTGCTCCAAccg                              >  2:1076686‑M2/30‑100 (MQ=255)
                                                                        taaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgcc                            <  1:1455518‑M2/73‑1 (MQ=255)
                                                                        TGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgcc                            >  1:108359‑M1/1‑100 (MQ=255)
                                                                        TGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgcc                            <  1:3143489‑M1/100‑1 (MQ=255)
                                                                         gCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgccg                           <  1:978269/100‑1 (MQ=255)
                                                                          cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                          >  1:327045/1‑100 (MQ=255)
                                                                             cGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATc                       >  1:765972/1‑100 (MQ=255)
                                                                              gCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATcc                      >  1:2367820/1‑100 (MQ=255)
                                                                               cTTGACGCGCCTTATCCGGCCTACCCGCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCg                     <  2:242432/100‑1 (MQ=255)
                                                                                 tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                   <  2:2501716/100‑1 (MQ=255)
                                                                                 tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCCGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                   <  1:2716240/100‑1 (MQ=255)
                                                                                  gACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAGCCGCCGGATCCGGCa                  >  1:3200135/1‑100 (MQ=255)
                                                                                  gACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCAAACCGCCGGATCCGGCa                  >  1:1983901/1‑100 (MQ=255)
                                                                                   aCGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCAt                 >  2:2232953/1‑100 (MQ=255)
                                                                                   aCGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCAt                 >  2:1414710/1‑100 (MQ=255)
                                                                                    cgcgCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATa                >  1:622168/1‑100 (MQ=255)
                                                                                     gcgcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAc               <  1:2742421/100‑1 (MQ=255)
                                                                                      cgcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAcc              >  2:2338518/1‑100 (MQ=255)
                                                                                       gcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCg             <  2:1152582/100‑1 (MQ=255)
                                                                                         cTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGAt           >  1:603650/1‑100 (MQ=255)
                                                                                         cTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGAt           >  1:358532/1‑100 (MQ=255)
                                                                                         cTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGAt           <  2:1567156/100‑1 (MQ=255)
                                                                                          ttATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGAtt          <  1:1678644/100‑1 (MQ=255)
                                                                                           tATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTa         >  1:722465/1‑100 (MQ=255)
                                                                                             tccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAAt       <  1:519526‑M2/94‑1 (MQ=255)
                                                                                             tccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAAt       <  1:439689‑M2/94‑1 (MQ=255)
                                                                                             tccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAAt       <  1:803224‑M2/94‑1 (MQ=255)
                                                                                             tccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAAt       >  1:2992237‑M2/7‑100 (MQ=255)
                                                                                              ccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg      >  2:287380‑M2/6‑100 (MQ=255)
                                                                                               cggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc     <  2:128540‑M2/96‑1 (MQ=255)
                                                                                                 gcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAg   <  2:2625728‑M2/98‑1 (MQ=255)
                                                                                                 gCCTACACCCGCTACACACCCCGCAGGCCTGATCAGATGCGACAGCATCCCATACGCCATTGTCCTCCAACCGCAGCATCAGCCATCCCGAATAATGCAg   <  2:2714457/100‑1 (MQ=255)
                                                                                                  cCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGt  >  1:1263608‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                  
ACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAGT  >  NC_000913/3217368‑3217565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.