New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620220NA (NA)4 (0.040) 3/166 NT 100% coding (1029/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620255 0 (0.000)coding (1064/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCAC  >  NC_000913/3620156‑3620354
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tGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCC                                                                                                     >  2:598211‑M2/1‑100 (MQ=255)
                                                           tACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacacca                                          <  2:92536‑M2/100‑60 (MQ=255)
                                                             ccGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc                                        <  1:3240501‑M2/100‑62 (MQ=255)
                                                             ccGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccacc                                        <  1:1217543‑M2/100‑62 (MQ=255)
                                                              cGGGGCCGGATGGTGGCGCACCGTCACACGGGCC‑‑‑ggtatttatcatcgtaagtatagctgcgcacctgtttgccactacggtcatacaccaccgccagt                                     <  2:804564‑M2/100‑66 (MQ=255)
                                                                                           gggCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatag          >  1:92538‑M2/1‑9 (MQ=255)
                                                                                              ccggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgc       >  1:1649466‑M2/1‑6 (MQ=255)
                                                                                               cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      >  2:165786‑M2/1‑5 (MQ=255)
                                                                                               cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      >  2:475862‑M2/1‑5 (MQ=255)
                                                                                               cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      >  2:328617‑M2/1‑5 (MQ=255)
                                                                                               cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      >  1:2553291‑M2/1‑5 (MQ=255)
                                                                                                ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcac     <  2:1691045‑M2/100‑97 (MQ=255)
                                                                                                ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcac     >  2:2900246‑M2/1‑4 (MQ=255)
                                                                                                ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcac     <  1:57676‑M2/100‑97 (MQ=255)
                                                                                                ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgacagttcgccgcgtggcgtccagccatagcgcac     <  2:190292‑M2/100‑97 (MQ=255)
                                                                                                 gccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacc    <  1:2546472‑M2/100‑98 (MQ=255)
                                                                                                 gccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgc       >  1:71584‑M2/1‑3 (MQ=255)
                                                                                                  ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   <  2:1564207‑M2/100‑99 (MQ=255)
                                                                                                  ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   <  2:93577‑M2/100‑99 (MQ=255)
                                                                                                  ccccggtatttatcatcgtaagtaaagctgcgcacctgttggccactaccgtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacc    >  2:2836425‑M2/1‑2 (MQ=255)
                                                                                                   cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag  <  2:1027605‑M2/100‑100 (MQ=255)
                                                                                                   cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag  <  2:2069574‑M2/100‑100 (MQ=255)
                                                                                                   cccggtaattatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag  <  1:1703064‑M2/100‑100 (MQ=255)
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TGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCAC  >  NC_000913/3620156‑3620354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.