New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3676121 =NA (NA)5 (0.050) 5/164 NT NA noncoding (1/161 nt) RIP264 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP264 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
?NC_000913 3676146 = NA (NA)noncoding (26/161 nt) RIP264 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site RIP264 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 132 total aligned reads displayed.

TGGCTGGCTTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCCAACAATC  >  NC_000913/3676047‑3676245
                                                                                                   |                                                                                                   
tggctggcTTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGcc                                                                                                     <  1:2174813/100‑1 (MQ=255)
tggctggcTTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGcc                                                                                                     >  2:2376406/1‑100 (MQ=255)
atgccggatgcggcgtgaacgccttatccggcctacaaatccttgcgaattcaatatattgtatggaaattcagGCCTGATGCGCTACGCTTATCAGGcc                                                                                                     >  1:2426448‑M1/75‑100 (MQ=255)
 ggctggctTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCt                                                                                                    <  1:630586/100‑1 (MQ=255)
  gctggctTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATGAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTg                                                                                                   >  2:3227045/1‑100 (MQ=255)
  gctggctTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTg                                                                                                   <  1:2008280/100‑1 (MQ=255)
   ctggctTGACGTTAATCGCCCTGCTGCTGACCTATGAGTCGCGATATCAGTCGTTGTAATATGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTg                                                                                                   <  2:3071508/99‑1 (MQ=38)
   ccggatgcggcgtgaacgccttatccggcctacaaatccttgcgaattcaatatattgtatggaaattcagGCCTGATGCGCTACGCTTATCAGGCCTGa                                                                                                  >  2:40444‑M1/72‑100 (MQ=255)
    cggatgcggcgtgaacgccttatccggcctacaaatccttgcgaattcaatatattgtatggaaattcagGCCTGATGCGCTACGCTTATCAGGCCTGaa                                                                                                 >  1:1546963‑M1/71‑100 (MQ=255)
     ggctTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAAt                                                                                                >  1:2581077/1‑100 (MQ=255)
      gctTGACGTTAATCGCCCTGCTGCCGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAAtt                                                                                               >  2:2799919/1‑100 (MQ=255)
        ttGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTc                                                                                             <  1:1833216/100‑1 (MQ=255)
        ttGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTc                                                                                             >  1:1214242/1‑100 (MQ=255)
         tGACGTTAATCGCCCTGCTGCTGACCCATGAGGCGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTcc                                                                                            <  2:2468111/100‑1 (MQ=255)
         tGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTcc                                                                                            >  1:1317642/1‑100 (MQ=255)
         gcggcgtgaacgccttatccggcctacaaatccttgcgaattcaatatattgtatggaaattcagGCCTGATGCGCTACGCTTATCAGGCCTGAATTTc                                                                                             >  1:2449121‑M1/66‑99 (MQ=255)
          gACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCa                                                                                           <  1:3087091/100‑1 (MQ=255)
           aCGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCAt                                                                                          <  2:2621336/100‑1 (MQ=255)
             gTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATAc                                                                                        <  1:2253471/100‑1 (MQ=255)
              ttAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACa                                                                                       <  2:2803807/100‑1 (MQ=255)
               tAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACaa                                                                                      <  2:1159437/100‑1 (MQ=255)
               tAATCACCCTGCTGCTTACCCATGATGCTCGACACCAGTCGTTGTAATAAGAGTGTAAAGCCTTATGCGCTATGCTTATCAGGCCTGAAt                                                                                                <  2:2118335/90‑1 (MQ=25)
                aaTCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAat                                                                                     >  2:1883205/1‑100 (MQ=255)
                 aTCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAata                                                                                    >  1:2454972/1‑100 (MQ=255)
                  tCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGGTCCGCTTATCAGGCCTGAATTTACATACAatat                                                                                   >  2:1883359/1‑100 (MQ=255)
                   cGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAata                                                                                    >  2:2053889/1‑98 (MQ=255)
                    gCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAatatat                                                                                 >  2:682455/1‑100 (MQ=255)
                    gCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAatatat                                                                                 >  2:2954863/1‑100 (MQ=255)
                     cccTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATAtt                                                                                <  2:2701493/100‑1 (MQ=255)
                        tgctgctgACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCGATACAATATATTGaa                                                                             >  1:3205113/1‑100 (MQ=255)
                        tgctgctgACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGaa                                                                             <  2:521982/100‑1 (MQ=255)
                         gctgctgACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAAt                                                                            <  1:2212259/100‑1 (MQ=255)
                         gctgctgACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAAt                                                                            <  1:1656044/100‑1 (MQ=255)
                             ctgACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGc                                                                        <  1:1486707/100‑1 (MQ=255)
                              tgACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCa                                                                       >  1:2467092/1‑100 (MQ=255)
                               gACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCaa                                                                      <  1:976696/100‑1 (MQ=255)
                                aCCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAg                                                                     <  2:1803921/100‑1 (MQ=255)
                                 cccATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGAGCTATGCTTATAAGACCTGAATTTCCATAAAATATATTGAAttattaa                                                                      >  1:1717272/1‑93 (MQ=255)
                                       agaCGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGt                                                              >  2:1765100/1‑100 (MQ=255)
                                        gaCGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTa                                                             >  1:2944986/1‑100 (MQ=255)
                                         aCGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAg                                                            <  1:1151975/100‑1 (MQ=255)
                                          cgcgACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAgg                                                           >  2:628335/1‑100 (MQ=255)
                                          cgcgACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAgg                                                           <  1:1031711/100‑1 (MQ=255)
                                          cgcgACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAgg                                                           >  2:1139646/1‑100 (MQ=255)
                                             gACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGTGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCg                                                        >  2:1735704/1‑100 (MQ=255)
                                              aCATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCgg                                                       >  1:2938312/1‑100 (MQ=255)
                                               cATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGa                                                      <  2:1717260/100‑1 (MQ=255)
                                                aTCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGAt                                                     >  1:1680251/1‑100 (MQ=255)
                                                 tCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATa                                                    >  2:2196894/1‑100 (MQ=255)
                                                  cAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATaa                                                   >  1:1100412/1‑100 (MQ=255)
                                                  cAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATaa                                                   >  1:2564410/1‑100 (MQ=255)
                                                  cAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATaa                                                   >  2:55731/1‑100 (MQ=255)
                                                    gTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAgg                                                 >  1:2870249/1‑100 (MQ=255)
                                                     tCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAgg                                                 <  1:1500568/99‑1 (MQ=255)
                                                     tCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGc                                                >  1:842950/1‑100 (MQ=255)
                                                       gTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCg                                               <  2:120054/99‑1 (MQ=255)
                                                          gTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCa                                           >  2:1732724/1‑100 (MQ=255)
                                                          gTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCa                                           >  1:798044/1‑100 (MQ=255)
                                                           taataaGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGAGTTCAc                                          >  2:2306741/1‑100 (MQ=255)
                                                            aataaGAGTGAAACGCCTGATGCGCTACGCTTATCAGGCCTGAATATCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGAGTTCAcg                                         <  2:2454538/100‑1 (MQ=255)
                                                            aataaGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCAcg                                         >  2:332484/1‑100 (MQ=255)
                                                              taaGAGTGAAAAGCCTGATACGCTACGCTTATCAAGCCTGAATTTCCATACAACATAACGAATTCGCAAGAATTTGTAGGCCGCATAAGGCGTTCAcgcc                                       >  2:478285/1‑100 (MQ=25)
                                                               aaGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCAcgccg                                      <  1:2046977/100‑1 (MQ=255)
                                                               aaGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCAcgccg                                      <  2:2436781/100‑1 (MQ=255)
                                                                agagTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCAcgccgc                                     >  1:2832799/1‑100 (MQ=255)
                                                                agagTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCAcgccgc                                     <  2:230432/100‑1 (MQ=255)
                                                                agagTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCAcgccgc                                     >  1:700729/1‑100 (MQ=255)
                                                                  agTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCAt                                   >  2:3092820/1‑100 (MQ=255)
                                                                   gTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATc                                  >  1:3248144/1‑100 (MQ=255)
                                                                   gTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATc                                  >  2:588136/1‑100 (MQ=255)
                                                                   gTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATc                                  >  1:522520/1‑100 (MQ=255)
                                                                     ttcaggcctgataagcgtagcgcatcaggcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                >  1:1546963‑M2/31‑100 (MQ=255)
                                                                     tctaaGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                <  1:1304219/97‑1 (MQ=255)
                                                                     gAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                <  1:279753/100‑1 (MQ=255)
                                                                      tcaggcctgataagcgtagcgcatcaggcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                               >  2:40444‑M2/30‑100 (MQ=255)
                                                                        aaGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgaga                             >  2:1304211/1‑97 (MQ=255)
                                                                         ggcctgataagcgtagcgcatcaggcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt                            >  1:2426448‑M2/27‑100 (MQ=255)
                                                                          GCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg                           >  2:1214236‑M1/1‑100 (MQ=255)
                                                                           CCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa                          >  2:1680239‑M1/1‑100 (MQ=255)
                                                                           CCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa                          >  2:3248116‑M1/1‑100 (MQ=255)
                                                                             ttattcgcttcgcttATCAGTCCTGAATTTCTATACATTATATTGAATTCGTAATGATTTGTATTCCGGATAAGGCGTTCACGCCGCATCCGGCATGa                          <  2:2581057/93‑1 (MQ=18)
                                                                             TGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAAc                        <  2:1820815‑M1/100‑1 (MQ=255)
                                                                              GATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACa                       >  2:2513446‑M1/1‑100 (MQ=255)
                                                                               ATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACa                       >  1:570993‑M1/1‑99 (MQ=255)
                                                                                TGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACaaa                     >  1:920166‑M1/1‑100 (MQ=255)
                                                                                 gcgcTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAg                    >  1:1838036/1‑100 (MQ=255)
                                                                                  cgcTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGc                   >  2:1474075/1‑100 (MQ=255)
                                                                                  cgcTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGc                   <  1:840302/100‑1 (MQ=255)
                                                                                   gcTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAAGCGTTCACGCCGCATCCGGCATGAACAAAGca                  >  2:3136823/1‑100 (MQ=255)
                                                                                    cTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGcac                 >  1:2935368/1‑100 (MQ=255)
                                                                                         cTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACt              <  1:489954/98‑1 (MQ=255)
                                                                                           tATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGc          <  1:1883217/100‑1 (MQ=255)
                                                                                           tATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGc          >  2:1462845/1‑100 (MQ=255)
                                                                                             tcaggcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCca        <  1:990788‑M2/94‑1 (MQ=255)
                                                                                              caggcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCcaa       >  2:2043115‑M2/6‑100 (MQ=255)
                                                                                               aggcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCcaac      <  2:456431‑M2/96‑1 (MQ=255)
                                                                                               aggcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCcaac      >  1:350939‑M2/5‑100 (MQ=255)
                                                                                                 gcCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCcaacaa    >  1:2023601‑M2/3‑100 (MQ=255)
                                                                                                  cCTGAATTTCCATACAATATATTGAATTCGCACGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCCAACAAt   >  2:2238069‑M2/2‑100 (MQ=255)
                                                                                                   cTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCCAACAATc  <  2:2214149/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGGCTGGCTTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAATAAGAGTGAAAAGCCTGATGCGCTACGCTTATCAGGCCTGAATTTCCATACAATATATTGAATTCGCAAGGATTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCACACTTTGCCAACAATC  >  NC_000913/3676047‑3676245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.