BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3754860 =	NA (NA)	9 (0.080)	8/164	NT	NA	noncoding (1/82 nt)	REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3754890 =	NA (NA)	9 (0.080)	8/164	NT	NA	noncoding (31/82 nt)	REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 170 total aligned reads displayed.

TTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACG  >  NC_000913/3754791‑3754989

ttGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGcc                                                                                                     <  1:627893/100‑1 (MQ=255)

  ggCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTa                                                                                                   >  2:96854/1‑100 (MQ=255)

  ggCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTa                                                                                                   >  2:309289/1‑100 (MQ=255)

  ggCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTa                                                                                                   >  1:1467603/1‑100 (MQ=255)

    cGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCATaaa                                                                                                 <  1:2688724/100‑3 (MQ=255)

    cGTAGTCTGGGTTATTGCGCAAGTAGGATTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGAGGCGTGTACGCCTTATCCGACCTACg                                                                                                 >  2:3056568/1‑100 (MQ=37)

      tAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGt                                                                                               >  1:457810/1‑100 (MQ=255)

        gTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCa                                                                                             <  1:1823498/100‑1 (MQ=255)

        gTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCa                                                                                             <  2:1153957/100‑1 (MQ=255)

          cTGGGTTATTGCGCACGTAGGTTTCAAACGTAAATGGTAACAACGTGCGCTTTTTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           >  2:2380382/1‑100 (MQ=255)

          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           >  1:1346450/1‑100 (MQ=255)

          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           >  1:2846189/1‑100 (MQ=255)

          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           >  1:2817795/1‑100 (MQ=255)

          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           <  2:407986/100‑1 (MQ=255)

          cTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           <  1:2326667/100‑1 (MQ=255)

           tGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGt                                                                                          <  2:727867/100‑1 (MQ=255)

            gggTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGtt                                                                                         >  1:1982982/1‑100 (MQ=255)

            gggTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGAGGCGGCGTGTACGCCTTATCCGGCCTACGGTCAgg                                                                                           >  1:908161/1‑98 (MQ=255)

              gTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTcc                                                                                       >  1:1567574/1‑100 (MQ=255)

                tATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCg                                                                                     <  2:3002058/100‑1 (MQ=255)

                tATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCg                                                                                     <  2:269409/100‑1 (MQ=255)

                tATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCg                                                                                     >  1:384414/1‑100 (MQ=255)

                 aTTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGt                                                                                    <  2:860354/100‑1 (MQ=255)

                 aTTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGt                                                                                    <  2:858027/100‑1 (MQ=255)

                    gcgcACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAgg                                                                                 <  1:1243723/100‑1 (MQ=255)

                    gcgcACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAgg                                                                                 <  1:1204527/100‑1 (MQ=255)

                     cgcACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGAGTGTACGCCTTATACGGCCTACGGTCAGGTTCGCGTAgg                                                                                 >  2:3161384/1‑99 (MQ=255)

                      gcACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCa                                                                               >  1:2976987/1‑100 (MQ=255)

                        aCGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATg                                                                             >  1:224014/1‑100 (MQ=255)

                           tAGGTTTAAAACGTAAATTGTAACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTCCGGTCAGGTTCCCGTAGGCATGATa                                                                          >  1:1978863/1‑100 (MQ=255)

                            aGGTTTAAAACGTAAATTGTAACAATGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACTGTCAGGTTCCCGTAGGCATGATaa                                                                         <  2:2646051/100‑1 (MQ=255)

                             ggTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAg                                                                        >  1:1056080/1‑100 (MQ=255)

                               tttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAc                                                                      >  2:528625/1‑100 (MQ=255)

                               tttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAc                                                                      <  1:2380398/100‑1 (MQ=255)

                                  aaaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAcgcg                                                                   >  1:1902655/1‑100 (MQ=255)

                                    aaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTa                                                                 <  2:679406/100‑1 (MQ=255)

                                      cGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAg                                                               >  2:1786619/1‑100 (MQ=255)

                                       gTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGc                                                              >  1:94064/1‑100 (MQ=255)

                                        tAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCg                                                             >  1:1315783/1‑100 (MQ=255)

                                         aaaTTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGt                                                            >  2:1941894/1‑100 (MQ=255)

                                           aTTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCg                                                          <  2:1308402/100‑1 (MQ=255)

                                              gTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCAt                                                       >  1:2022106/1‑100 (MQ=255)

                                              gTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCAt                                                       >  1:468356/1‑100 (MQ=255)

                                               tAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATc                                                      >  1:2371822/1‑100 (MQ=255)

                                                cctacgggaacctgaccgtaggccggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCa                                                     >  1:544362‑M2/52‑100 (MQ=255)

                                                aacaacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCa                                                     <  1:394340/100‑1 (MQ=255)

                                                aacaacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCa                                                     <  1:2312244/100‑1 (MQ=255)

                                                 acaacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCTTACGCGTcttatcat                                                    <  2:2144658/100‑8 (MQ=25)

                                                  caacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAgn                                                   <  2:2161488/100‑2 (MQ=255)

                                                  caacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAgg                                                   >  1:1347733/1‑100 (MQ=255)

                                                   acgggaacctgaccgtatGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAgg                                                   >  1:1877155‑M1/19‑99 (MQ=255)

                                                   aacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGc                                                  <  2:101603/100‑1 (MQ=255)

                                                    acGTGCGTTTTGTTTATGCCGTATGCGGCGTGTACGCCTTATCCGGCCTTCGGTCATGTTCCCGTAGTCATGATAAGACGCGTAAGCGTCGCATCAg                                                    <  2:1031763/97‑1 (MQ=37)

                                                     cGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCaa                                                >  1:1287597/1‑100 (MQ=255)

                                                     cGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCaa                                                >  1:557895/1‑100 (MQ=255)

                                                       tGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATg                                              <  1:962202/100‑1 (MQ=255)

                                                        gcgcTTTGTTTATGCCGGATGCGGCGTGTATGCCTTATCCGGCCCCCTGTCAGGTTCCCGTAGGTATGATGCGACGCTTACGCGTCTTATCATGcctacg                                             <  1:2313817/100‑6 (MQ=12)

                                                        gcgcTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGa                                             >  1:3132930/1‑100 (MQ=255)

                                                         cgcTTTGTTTATGCCTGATGCGTCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAATACGCGTAAGCGTCGCATCAGGCAATGaa                                            >  2:2101826/1‑100 (MQ=255)

                                                          gcTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAAt                                           <  1:2757992/100‑1 (MQ=255)

                                                           cTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATa                                          >  1:2298623/1‑100 (MQ=255)

                                                            tttGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATAc                                         >  1:2461419/1‑100 (MQ=255)

                                                               gTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCa                                      >  2:1438812/1‑100 (MQ=255)

                                                                 ttATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAAt                                    >  2:3188962/1‑100 (MQ=255)

                                                                 ttATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAAt                                    >  1:2084193/1‑100 (MQ=255)

                                                                 ttATGCCGGATGCGGCGTGTACGCCATATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAAGCGTAAGCGTCGCATCAGGCAATGAATAACCaa                                     >  2:557281/1‑99 (MQ=255)

                                                                  taggccggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATg                                   >  2:3213597‑M2/34‑100 (MQ=255)

                                                                   aTGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGc                                  <  2:1499288/100‑1 (MQ=255)

                                                                    ggccggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCg                                 >  1:2526857‑M2/32‑100 (MQ=255)

                                                                     GCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGa                                <  1:2970033‑M1/100‑1 (MQ=255)

                                                                      ccggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAc                               >  2:2883167‑M2/30‑100 (MQ=255)

                                                                      CCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAc                               >  1:3242533‑M1/1‑100 (MQ=255)

                                                                       CGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAcc                              <  2:2011745‑M1/100‑1 (MQ=255)

                                                                        ggataaggcgtacacgccgcatccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCa                             >  1:2835779‑M2/28‑100 (MQ=255)

                                                                         GATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAg                            >  2:2298607‑M1/1‑100 (MQ=255)

                                                                           TGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCt                          <  1:3255061‑M1/100‑1 (MQ=255)

                                                                             cggcgTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGcttc                        <  1:673039/100‑1 (MQ=255)

                                                                             cggcgTGTACGCCTTATCCGGCCTACGGTCAGATTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGcttc                        >  1:3078737/1‑100 (MQ=255)

                                                                              ggcgTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGcttct                       <  1:309291/100‑1 (MQ=255)

                                                                                cgTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTta                     <  2:2371806/100‑1 (MQ=255)

                                                                                 gtgtACGCTTTATCCGGCCTACGGTCAGGTTCCCGTAGGTATGCTAAGACGCGTTAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTtat                    <  2:1536129/100‑1 (MQ=37)

                                                                                  tgtACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTtata                   >  2:3155126/1‑100 (MQ=255)

                                                                                   acacgccgcatccggcATACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTatat                  <  2:1877143‑M2/84‑1 (MQ=255)

                                                                                    tACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATc                 <  1:1044720/100‑1 (MQ=255)

                                                                                    tACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATc                 <  2:167006/100‑1 (MQ=255)

                                                                                     aCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCATTGAATACCCAATGCGACCAGCTTCTTATATCa                >  1:2642435/1‑100 (MQ=255)

                                                                                     aCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCa                >  2:2912578/1‑100 (MQ=255)

                                                                                     aCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCa                <  1:528627/100‑1 (MQ=255)

                                                                                     aCGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCa                <  2:1567565/100‑1 (MQ=255)

                                                                                      cGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAg               <  2:457808/100‑1 (MQ=255)

                                                                                      cGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAg               <  2:457899/100‑1 (MQ=255)

                                                                                       gCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAACGCGACCAGCTTCTTATATCAGa              >  2:907784/1‑100 (MQ=255)

                                                                                         cTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAAc            >  2:2478937/1‑100 (MQ=255)

                                                                                          ttATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACa           >  2:1112063/1‑100 (MQ=255)

                                                                                            atccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGc         >  2:1831939‑M2/8‑100 (MQ=255)

                                                                                            atccggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGc         <  2:2526839‑M2/93‑1 (MQ=255)

                                                                                               cggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGcccc      >  1:50178‑M2/5‑100 (MQ=255)

                                                                                               cggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGcccc      <  1:2063442‑M2/96‑1 (MQ=255)

                                                                                                ggcCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCa     <  1:859201‑M2/97‑1 (MQ=255)

                                                                                                   cTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACg  <  2:2782250/100‑1 (MQ=255)

TTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACG  >  NC_000913/3754791‑3754989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.