| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4209894 = | NA (NA) | 3 (0.030) | 3/156 | NT | 100% | intergenic (+45/‑149) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon |
| ? | NC_000913 | 4209912 = | 0 (0.000) | intergenic (+63/‑131) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon | |||||
GGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATG > NC_000913/4209813‑4210011 | gagagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtt > 2:410475‑M2/100‑100 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagttt < 2:2987662‑M2/2‑1 (MQ=255) agagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagttt < 1:2488186‑M2/2‑1 (MQ=255) gagactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtttt > 2:2770991‑M2/98‑100 (MQ=255) agactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTg < 1:2863568‑M2/4‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 2:1178899‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 1:2787804‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 1:2766114‑M2/5‑1 (MQ=255) gactcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 1:2634608‑M2/5‑1 (MQ=255) actcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgag < 1:1209750‑M2/6‑1 (MQ=255) actcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgag < 2:528424‑M2/6‑1 (MQ=255) actcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgag < 1:873054‑M2/6‑1 (MQ=255) actcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgag < 1:2938450‑M2/6‑1 (MQ=255) actcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTga < 1:2751077‑M2/5‑1 (MQ=255) ctcacgaaccactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 2:2858115‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttttatattaattatctcaaacatcacccgaagatgagtTTTgaga > 2:143317‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga < 2:341306‑M2/7‑1 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga > 2:666947‑M2/94‑100 (MQ=255) ctcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgag > 2:2474698‑M2/94‑99 (MQ=255) tcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTgaga < 2:3218157‑M2/7‑1 (MQ=255) tcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGat > 1:2518214‑M2/93‑100 (MQ=255) tcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGat < 1:2210757‑M2/8‑1 (MQ=255) tcacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGat < 2:499351‑M2/8‑1 (MQ=255) tcacgaacaactttcgttgttcagtgcttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGat < 1:690551‑M2/8‑1 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata < 2:3220228‑M2/9‑1 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata < 1:2471830‑M2/9‑1 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:136062‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:1529054‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 2:2679563‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 2:1014141‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:1677165‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:1839350‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:346725‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:3209922‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 2:610842‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:2362282‑M2/92‑100 (MQ=255) cacgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGata > 1:2385047‑M2/92‑100 (MQ=255) acgaacaactttcgttgttcagtgtttcaattttcagcttgattcagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGatat < 2:1039839‑M2/10‑1 (MQ=255) acgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGatat > 2:1587963‑M2/91‑100 (MQ=255) acgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGatat > 1:2409062‑M2/91‑100 (MQ=255) cgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGATAtt < 2:942517‑M2/11‑1 (MQ=255) cgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGATAtt > 2:3197816‑M2/90‑100 (MQ=255) cgaacaactttcgttgttcagtgtttcaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGATAtt > 1:1574211‑M2/90‑100 (MQ=255) cgaacaactttcgttgttcagtgtttaaattttcagcttgatccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGatat > 2:2813166‑M2/90‑99 (MQ=255) tccagatttttaaagagcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACt > 1:1355771‑M2/49‑100 (MQ=255) agagcaaatatctcaaacatcacccgaagatgagtGTTGAGATATTTACTCTTTAAAAATCTGGATCAAGATGAAAATTGAAACACTGAACAACGAAAg > 1:944339‑M2/36‑99 (MQ=255) agcaaatatctcaaacatcacccgaagatgagtTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAgttg > 1:1987581‑M2/34‑100 (MQ=255) TTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatg > 2:1389122‑M2/1‑100 (MQ=255) TTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACgatg < 2:927665‑M2/100‑1 (MQ=255) | GGCGGTAACAGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTCATCTTCGGGTGATGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATG > NC_000913/4209813‑4210011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |