BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4332016 =	NA (NA)	4 (0.040)	4/160	NT	NA	noncoding (3/32 nt)	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	4332047 =	NA (NA)	4 (0.040)	4/160	NT	NA	intergenic (+43/‑69)	proP/pmrR	proline/glycine betaine transporter/putative membrane‑bound BasS regulator

Only 100 of 138 total aligned reads displayed.

GATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAC  >  NC_000913/4331948‑4332144

    tGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGa                                                                                               >  1:400888/1‑100 (MQ=255)

    tGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGa                                                                                               <  2:171418/100‑1 (MQ=255)

      cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGaa                                                                                              >  2:319889/1‑99 (MQ=255)

       aGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAct                                                                                            <  2:1927022/100‑1 (MQ=255)

        ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                           <  1:2450410/100‑1 (MQ=255)

        ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                           >  2:2205053/1‑100 (MQ=255)

         gagAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActct                                                                                          >  1:2202940/3‑100 (MQ=255)

          cGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCtt                                                                                         >  1:1174284/1‑100 (MQ=255)

           gAAACTTACCCGCCTGGTGCAGCAACATCCGCGAAGTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTa                                                                                        <  1:1891651/100‑1 (MQ=255)

            aaaCGTACGCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTaa                                                                                       <  1:560326/100‑1 (MQ=255)

             aaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAg                                                                                      <  2:2043587/100‑1 (MQ=255)

             aaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAg                                                                                      <  2:155878/100‑1 (MQ=255)

              aCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAgg                                                                                     <  2:2285979/100‑1 (MQ=255)

              aCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAgg                                                                                     <  2:2337037/100‑1 (MQ=255)

              aCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAgg                                                                                     <  1:1791601/100‑1 (MQ=255)

                 tACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTc                                                                                  >  1:193783/1‑100 (MQ=255)

                 tACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTc                                                                                  >  2:2912520/1‑100 (MQ=255)

                 tACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTc                                                                                  >  2:2828962/1‑100 (MQ=255)

                  aCCCGCCTGGTGTAGCAACATCCGCGAATTGATGAATAAACTGGAATGGATGACCTGATGTGACGCTGTCTTATCAGGCCAATTGATCTCTTAAGGTTCa                                                                                 <  1:3239830/100‑1 (MQ=255)

                  aCCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCa                                                                                 >  2:2501904/1‑100 (MQ=255)

                   cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                >  2:1876789/1‑100 (MQ=255)

                   cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                >  1:1347212/1‑100 (MQ=255)

                    ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACt                                                                               <  1:2665621/100‑1 (MQ=255)

                    ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACt                                                                               <  1:3148080/100‑1 (MQ=255)

                    ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACt                                                                               <  2:2119047/100‑1 (MQ=255)

                        cTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAt                                                                           >  1:2037888/1‑100 (MQ=255)

                         tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtc                                                                          >  1:565888/1‑100 (MQ=255)

                            tGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATctct                                                                       >  1:910104/1‑100 (MQ=255)

                            tGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATctct                                                                       >  2:992636/1‑100 (MQ=255)

                              cagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGa                                                                     >  1:1289105/1‑100 (MQ=255)

                               agcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAc                                                                    >  2:1686307/1‑100 (MQ=255)

                               agcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAc                                                                    >  2:3002899/1‑100 (MQ=255)

                                gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                   >  2:1876420/1‑100 (MQ=255)

                                    cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                               <  2:969458/100‑1 (MQ=255)

                                     aTCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                               <  1:1281760/99‑1 (MQ=255)

                                     aTCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCAt                                                              >  2:3236729/1‑100 (MQ=255)

                                      tCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGGCGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATa                                                             >  2:266224/1‑100 (MQ=255)

                                       ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                            <  2:1399031/100‑1 (MQ=255)

                                       ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                            <  2:2202924/100‑1 (MQ=255)

                                         gcgAATTGATGAATAAGCTGAAACGGATGGCCGGATGTGACGCTGTCTTATCAGGCCAAGTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActc                                                          <  1:2195308/100‑1 (MQ=255)

                                              ttGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcctc                                                     >  1:2362165/1‑100 (MQ=255)

                                               tgatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                    <  1:980511/100‑1 (MQ=255)

                                               tgatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                    >  1:596038/1‑100 (MQ=255)

                                               tgatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                    <  1:906627/100‑1 (MQ=255)

                                                gatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCa                                                   >  1:932903/1‑100 (MQ=255)

                                                gatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCACATACTCTCCTCCa                                                   >  1:2804675/1‑100 (MQ=255)

                                                 atgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAg                                                  <  1:2213965/100‑1 (MQ=255)

                                                 atgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAg                                                  <  1:76924/100‑1 (MQ=255)

                                                 atgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAg                                                  <  2:2216610/100‑1 (MQ=255)

                                                  tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                 >  1:1568860/1‑100 (MQ=255)

                                                  tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                 <  2:2285773/100‑1 (MQ=255)

                                                   gaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGt                                                <  1:2054568/100‑1 (MQ=255)

                                                   gaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGt                                                >  2:3068640/1‑100 (MQ=255)

                                                    aaTGAGCTGAAGCGGGTGGCCTGATGTGACGCGGTCTTATGAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTTACGCGCATACTCTCCTCCAGGtt                                               <  2:1908647/100‑1 (MQ=255)

                                                        aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACg                                           >  1:1175403/1‑100 (MQ=255)

                                                        aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACg                                           >  2:196507/1‑100 (MQ=255)

                                                         gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                          <  2:2037874/100‑1 (MQ=255)

                                                         gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                          >  1:1564153/1‑100 (MQ=255)

                                                          cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgga                                         <  1:3147850/100‑1 (MQ=255)

                                                          cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgga                                         >  2:2846962/1‑100 (MQ=255)

                                                           tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                        <  1:2098057/100‑1 (MQ=255)

                                                           tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                        <  2:193781/100‑1 (MQ=255)

                                                           tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                        >  1:2701519/1‑100 (MQ=255)

                                                           tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                        <  1:518804/100‑1 (MQ=255)

                                                           tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGATCACTTAATCTCTGACGCGCATACTCTAATCCAGGTTAACggag                                        >  1:1112144/1‑100 (MQ=255)

                                                            gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGTTTAACgga                                         >  1:2501083/1‑98 (MQ=255)

                                                            gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagg                                       >  1:2288765/1‑100 (MQ=255)

                                                            gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagg                                       >  1:1292036/1‑100 (MQ=255)

                                                            gAAACGGATGGCCTCATGTGACGCTGTCTTATCAGGTCAATTGAACTCTTAAGGTTCACTTAATCTCTGCCGCGCATACTCTCCACCAGGTTAACggagg                                       <  2:143426/100‑1 (MQ=255)

                                                              aaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGgaggag                                     <  2:1671963/100‑1 (MQ=255)

                                                              aaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGgaggag                                     <  2:1347204/100‑1 (MQ=255)

                                                              aaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGgaggag                                     >  2:2182637/1‑100 (MQ=255)

                                                              aaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGAGCATACTCTCATCCAGGTTAACGgaggag                                     >  2:947291/1‑100 (MQ=255)

                                                                 aattggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGt                                  >  1:145001‑M2/35‑100 (MQ=255)

                                                                  gATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTg                                 <  1:2828986/100‑1 (MQ=255)

                                                                  gATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTg                                 >  2:2395942/1‑100 (MQ=255)

                                                                   aTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTg                                 <  2:194537/99‑1 (MQ=255)

                                                                     ggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCaa                              >  1:1466681‑M2/31‑100 (MQ=255)

                                                                      GCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCaa                              >  1:266226‑M1/1‑99 (MQ=255)

                                                                      GCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAAt                             <  1:973115‑M1/100‑1 (MQ=255)

                                                                       CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                            <  1:1436820‑M1/100‑1 (MQ=255)

                                                                       CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                            >  2:819375‑M1/1‑100 (MQ=255)

                                                                       CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                            >  1:2330559‑M1/1‑100 (MQ=255)

                                                                         TGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGaa                          >  2:910099‑M1/1‑100 (MQ=255)

                                                                               gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCg                    <  2:2462764/100‑1 (MQ=255)

                                                                                 cGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCATGTTAACGGAGAAAAAAGCAATGAAAAACCgtg                  >  1:1463897/1‑100 (MQ=255)

                                                                                 cGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCgtg                  <  1:319891/100‑1 (MQ=255)

                                                                                 cGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCgtg                  <  1:2535838/100‑1 (MQ=255)

                                                                                 cGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCATCCAGGTTAACGGAGGAAAATAAAAAAAAAAACCgtg                  <  2:1728486/100‑1 (MQ=255)

                                                                                     gTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTa              >  2:2015246/1‑100 (MQ=255)

                                                                                      tCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTAt             <  2:1134306/100‑1 (MQ=255)

                                                                                       cTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATg            <  2:2701496/100‑1 (MQ=255)

                                                                                        ttATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGa           <  2:400886/100‑1 (MQ=255)

                                                                                         tATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaa          >  1:2827919/1‑100 (MQ=255)

                                                                                          atcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa         <  1:2353615‑M2/91‑1 (MQ=255)

                                                                                             aggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGtt      >  2:1137883‑M2/7‑100 (MQ=255)

                                                                                              ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     <  2:1885335‑M2/95‑1 (MQ=255)

                                                                                              ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt     >  2:455014‑M2/6‑100 (MQ=255)

                                                                                               gccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATATTCTCCTCCAGGTTAACGGAGGAGAGTGCAATTAATTTCCGTGTTTATGAAAGTTTa    <  2:565683‑M2/96‑1 (MQ=255)

                                                                                                 cAATTGAACTCTTAAGGTTCACTTAATCACTGACGCGCATACTCTCCTCCAGGCTAACGGAGGAGAGCGAAATGAAAAACCCTGTTTAAGAAAGTTTAAc  >  2:1102553/1‑100 (MQ=255)

GATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAC  >  NC_000913/4331948‑4332144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.