New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4627662 =132 (1.100)8 (0.070) 5/170 NT 5.9% coding (348/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 4627688 = 127 (1.110)coding (374/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 178 total aligned reads displayed.

ACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAG  >  NC_000913/4627589‑4627787
                                                                                                   |                                                                                                   
ggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCg                                                                                                     >  1:2424684‑M1/74‑100 (MQ=255)
 cGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGt                                                                                                    >  2:2783423/1‑100 (MQ=255)
   aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                  >  2:2295910/1‑100 (MQ=255)
   aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                  <  1:2143084/100‑1 (MQ=255)
   aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                  >  1:2535020/1‑100 (MQ=255)
    gCTGCCTATCATTATGGGTTTTGACGATACACGTGACCGCGCGTTATTCGAAGACAGTGCCATGTCGCAGCAGGCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                 >  2:496856/1‑100 (MQ=255)
    gCTGCATATTATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                 <  1:2452954/100‑1 (MQ=255)
     catgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                >  1:758889‑M1/69‑100 (MQ=255)
     cTGCATATCATTATGGGTTTTGACGATACCCGTGCCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                >  1:1420126/1‑100 (MQ=255)
     cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                <  1:2777050/100‑1 (MQ=255)
       gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                                              >  1:832944/1‑100 (MQ=255)
       gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                                              >  2:674221/1‑100 (MQ=255)
            ttcttATGGGTTTAGGCTATACCCGTGACCGCGCGGTGTTCGACCATAGTGCCATGTTGCAGCCGCCGACCGTGCCGGATCGTCGGCGTTGGTTAt                                                                                             <  2:256314/93‑1 (MQ=255)
            tCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCa                                                                                         >  1:430452/1‑100 (MQ=255)
            tCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCa                                                                                         >  1:1948529/1‑100 (MQ=255)
            tCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCa                                                                                         >  1:773822/1‑100 (MQ=255)
             cATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                                                                                        >  1:2670369/1‑100 (MQ=255)
             cATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                                                                                        >  2:1052061/1‑100 (MQ=255)
             cATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaa                                                                                        >  2:3237238/1‑100 (MQ=255)
              aTTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                                                                                       >  1:1053731/1‑100 (MQ=255)
                 aTGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtt                                                                                    >  1:2669196/1‑100 (MQ=255)
                  tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                                   <  1:1381512/100‑1 (MQ=255)
                  tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                                   >  2:1453419/1‑100 (MQ=255)
                   gggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtttt                                                                                  <  2:534081/100‑1 (MQ=255)
                    ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                                                 >  1:49182/1‑100 (MQ=255)
                    ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                                                 >  1:2229680/1‑100 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                                                <  1:2087315/100‑1 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                                                <  1:2386230/100‑1 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                                                 >  2:711394/1‑99 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCACCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                                                >  1:2696654/1‑100 (MQ=255)
                        ttGACGCTACCCTTGACCGCGCGTTTTTCGAAGACAGTGCCATGTCGCATCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                                                                              <  2:2535002/99‑1 (MQ=255)
                        ttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata                                                                             <  1:2295926/100‑1 (MQ=255)
                        ttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata                                                                             <  2:910440/100‑1 (MQ=255)
                         tGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAatat                                                                            >  1:2853115/1‑100 (MQ=255)
                         tGACGATACCCGTGACCGCGAGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAatat                                                                            >  2:1725870/1‑100 (MQ=255)
                          gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                                           <  2:2560786/100‑1 (MQ=255)
                           aCGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                                           <  2:1246178/99‑1 (MQ=255)
                                 cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                                                    >  1:256831/1‑100 (MQ=255)
                                   cGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAata                                                                  >  1:866675/1‑100 (MQ=255)
                                       aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCg                                                              >  1:2933776/1‑100 (MQ=255)
                                               ttgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATg                                                      <  1:3119023/100‑1 (MQ=255)
                                                    cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                                                 >  1:155200/1‑100 (MQ=255)
                                                     gAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCa                                                <  2:674143/100‑1 (MQ=255)
                                                     gAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCa                                                >  2:1828188/1‑100 (MQ=255)
                                                      aaGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCaa                                               <  1:1239143/100‑1 (MQ=255)
                                                       aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                                              <  2:1585686/100‑1 (MQ=255)
                                                          cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                                           >  2:2844741/1‑100 (MQ=255)
                                                            gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                                         >  2:2075238/1‑100 (MQ=255)
                                                            gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                                         >  2:2659501/1‑100 (MQ=255)
                                                            gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                                         >  1:974178/1‑100 (MQ=255)
                                                             tGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAagag                                        >  2:3121389/1‑100 (MQ=255)
                                                              gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGCagagn                                       <  2:2413843/100‑2 (MQ=255)
                                                              gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAag                                          >  1:311258/1‑97 (MQ=255)
                                                              gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAgg                                       <  2:275961/100‑1 (MQ=255)
                                                              gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAgg                                       <  1:1684284/100‑1 (MQ=255)
                                                               ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg                                      >  1:1975877/1‑100 (MQ=255)
                                                                 aTGTCGCAGCAGCCGACCGTGCCGGGTCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCa                                    <  1:2750370/100‑1 (MQ=255)
                                                                  tGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCAt                                   >  2:2179865/1‑100 (MQ=255)
                                                                  aaccaacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCAt                                   >  1:2723741‑M2/34‑100 (MQ=255)
                                                                   gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTCTCAACGAAGAGGGCAt                                   >  1:1830023/1‑99 (MQ=255)
                                                                    tCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATgg                                 <  1:403824/100‑1 (MQ=255)
                                                                      gcagcaGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAg                               >  1:534685/1‑100 (MQ=255)
                                                                      gcagcaGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAg                               >  2:3169803/1‑100 (MQ=255)
                                                                       cagcagCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGc                              <  1:2783447/100‑1 (MQ=255)
                                                                       cagcagCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGc                              >  2:687784/1‑100 (MQ=255)
                                                                         gcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  2:234682‑M2/27‑100 (MQ=255)
                                                                         gcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  1:1392183‑M2/27‑100 (MQ=255)
                                                                         GCAGCGGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  1:1338934‑M1/1‑100 (MQ=255)
                                                                         GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  1:3176131‑M1/1‑100 (MQ=255)
                                                                         GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            <  1:2626454‑M1/100‑1 (MQ=255)
                                                                         GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  2:832941‑M1/1‑100 (MQ=255)
                                                                          cagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGt                           >  2:737588‑M2/26‑100 (MQ=255)
                                                                          cagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGt                           >  2:1656196‑M2/26‑100 (MQ=255)
                                                                           AGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                          <  2:1898380‑M1/100‑1 (MQ=255)
                                                                           AGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                          >  2:2783307‑M1/1‑100 (MQ=255)
                                                                           AGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                          <  1:1463038‑M1/100‑1 (MQ=255)
                                                                             ccGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATc                        <  1:666439/100‑1 (MQ=255)
                                                                             ccGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATc                        <  2:1535656/100‑1 (MQ=255)
                                                                              cGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATcc                       >  1:1549771/1‑100 (MQ=255)
                                                                              cGACAGTGCCGGATCGCCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGTATTCATGCTTTCAACGAAGAGGGCATGGAGCAGTATc                        >  2:1174194/1‑99 (MQ=255)
                                                                               gACCGTGCCGTATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTAt                         <  2:1412442/97‑1 (MQ=255)
                                                                                  cGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCAc                   >  1:1386798/1‑100 (MQ=255)
                                                                                   gTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACg                  >  1:1158464/1‑100 (MQ=255)
                                                                                     gCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGc                >  1:2674848/1‑100 (MQ=255)
                                                                                     gCCGGATCGTCTGCGTTGGTAATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGc                >  2:1977691/1‑100 (MQ=255)
                                                                                       cGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTg              >  2:2082454/1‑100 (MQ=255)
                                                                                        ggATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTgg             >  2:2262368/1‑100 (MQ=255)
                                                                                         gATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCGACGAAGAGGGCATGGAGCCGTATCCGCACGGCTggg            >  1:3091703/1‑100 (MQ=255)
                                                                                         gATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTggg            <  1:2982048/100‑1 (MQ=255)
                                                                                              tCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtg       <  1:3237266/100‑1 (MQ=255)
                                                                                               ctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtgt      <  1:1817498‑M2/96‑1 (MQ=255)
                                                                                               ctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtgt      >  1:2820554‑M2/5‑100 (MQ=255)
                                                                                                tgcGTTGGTTATTGCAAACTTTTAAATATCAGAAACATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtg       >  2:1317625‑M2/4‑98 (MQ=255)
                                                                                                tgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtgtg     >  2:3163447‑M2/4‑100 (MQ=255)
                                                                                                tgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtgtg     <  1:2454097‑M2/97‑1 (MQ=255)
                                                                                                 gcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTgg    <  2:237015‑M2/98‑1 (MQ=255)
                                                                                                 gcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTgg    >  2:496589‑M2/3‑100 (MQ=255)
                                                                                                 gcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTgg    >  2:2994450‑M2/3‑100 (MQ=255)
                                                                                                   gTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAg  <  1:768999/100‑1 (MQ=255)
                                                                                                   gTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAg  >  2:414602/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAG  >  NC_000913/4627589‑4627787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.