New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 526005	NA (NA)	6 (0.050)	6/168	NT	100%	coding (2745/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 526027	0 (0.000)					coding (2767/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGC  >  NC_000913/525928‑526126                                                                                                    |                                                                                                    tACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGG                                                                                                     >  1:1335724‑M2/1‑100 (MQ=255)                                                                      gCCACGGACCCGGCGGGCAACCGGCTGCCGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgt                                <  2:199355‑M2/100‑70 (MQ=255)                                                                       ccACGGACCCGGCGGGCAACCGGCTGCCGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtg                               <  1:996547‑M2/100‑71 (MQ=255)                                                                        cACGGACCCGGCGGGCAACCGGCTGCCGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtgg                              <  1:1610411‑M2/100‑72 (MQ=255)                                                                             aCCCGGCGGGCAACCGGCTGCCGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctg                         <  2:837549‑M2/100‑77 (MQ=255)                                                                              cccGGCGGGCAACCGGCTGCCGGgtccgtggcatacgggatgcggatgtccaggtctggcgcgagggtgcgcacactctccagcctgcccgtggcgctg                         <  2:1418503‑M2/99‑77 (MQ=255)                                                                                cggcggGCAACCGGCTGCCGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtag                      <  1:1634446‑M2/100‑80 (MQ=255)                                                                                        ttccgatctccgggtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattc              >  1:531494‑M2/10‑13 (MQ=255)                                                                                                gtctggtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcg         >  1:949510‑M2/5‑5 (MQ=255)                                                                                                gCCGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcgcgcgtct      >  1:1708360‑M2/1‑5 (MQ=255)                                                                                                gCCGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtct      >  1:285494‑M2/1‑5 (MQ=255)                                                                                                 ccGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtctg     >  1:675723‑M2/1‑4 (MQ=255)                                                                                                 ccGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtctg     >  2:209637‑M2/1‑4 (MQ=255)                                                                                                 ccGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcagatcggaa     <  2:531492‑M2/100‑97 (MQ=255)                                                                                                  cGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtct      >  2:978514‑M2/1‑3 (MQ=255)                                                                                                  cGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccaccctgcccgtggcgctgtagccgtattcccgcgtctgt    >  2:1727793‑M2/1‑3 (MQ=255)                                                                                                  cGGgtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactcgccagcctgcccgtggcgctgtagccgtattcccgcgtctg     >  2:1582854‑M2/1‑3 (MQ=255)                                                                                                   gggtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtctgtc   <  2:2201417‑M2/100‑99 (MQ=255)                                                                                                   gggtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtctgtc   >  2:80494‑M2/1‑2 (MQ=255)                                                                                                    ggtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtctgtcg  >  1:679088‑M2/1‑1 (MQ=255)                                                                                                    ggtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtctgtcg  <  1:339866‑M2/100‑100 (MQ=255)                                                                                                    ggtccgtggcatacgggatgcggatgtccaggtctggtgcgagggtgcgcacactctccagcctgcccgtggcgctgtagccgtattcccgcgtctgtcg  <  1:180318‑M2/100‑100 (MQ=255)                                                                                                    |                                                                                                    TACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGC  >  NC_000913/525928‑526126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.