New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 792267NA (NA)7 (0.060) 6/164 NT NA noncoding (4/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 792297 NA (NA)noncoding (34/34 nt) REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 159 total aligned reads displayed.

GTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG  >  NC_000913/792199‑792395
                                                                                                  |                                                                                                  
 tttATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCa                                                                                                   <  1:828300/99‑1 (MQ=255)
  ttATGAATGATTTCGCTTTTTATCTGAAAAGAGACGCGGTTTCAGGCCTGCACGCGCCGAACCGTTGGCCTGAGAGGGTGCTAAGGCTGCCTACGGCAAg                                                                                                 <  2:253830/100‑1 (MQ=255)
    atgaatgaTTGCGCTTTTTCTCTGAAACAAGACGCGGCTTCATGCCTCCATGTCTCGAAACGTTGGCCGCGAATAGTGCTAACGCCGCCACCGCCAACGt                                                                                               >  2:2584302/1‑100 (MQ=255)
      gaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCa                                                                                             >  2:1854802/1‑100 (MQ=255)
      gaatgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCa                                                                                             >  1:3190443/1‑100 (MQ=255)
        atgaTTTCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGc                                                                                           <  2:3062599/100‑1 (MQ=255)
         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGcn                                                                                          <  2:930227/100‑2 (MQ=255)
         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                                                          <  1:598915/100‑1 (MQ=255)
         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                                                          >  2:3041775/1‑100 (MQ=255)
         tgaTTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCa                                                                                          >  2:1366733/1‑100 (MQ=255)
             tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACttc                                                                                      <  1:2191502/100‑3 (MQ=255)
             tGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAc                                                                                      <  1:2105079/100‑1 (MQ=255)
              gcgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTAcc                                                                                     <  2:3253020/100‑1 (MQ=255)
               cgcTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCg                                                                                    <  2:1441754/100‑1 (MQ=255)
                 cTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGAc                                                                                  >  1:1326530/1‑100 (MQ=255)
                 cTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGAc                                                                                  >  2:1079951/1‑100 (MQ=255)
                   ttttATTTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGCACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTc                                                                                <  2:2274171/100‑1 (MQ=255)
                   ntttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCTTCGAACAGTTGGCAGTAGAGGGTGCTAAGGCCGCCTACGGCAAGGTCAGCAATattgac                                                                                  >  2:1711879/2‑93 (MQ=255)
                     ttATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCaa                                                                              <  2:636751/100‑1 (MQ=255)
                      tATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAat                                                                             <  1:1219645/100‑1 (MQ=255)
                      tATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAat                                                                             <  2:1601048/100‑1 (MQ=255)
                       aTCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAata                                                                            <  1:1348644/100‑1 (MQ=255)
                        tCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatat                                                                           >  1:1737931/1‑100 (MQ=255)
                         cTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatata                                                                          >  2:2792022/1‑100 (MQ=255)
                          tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                                                         >  2:37513/1‑100 (MQ=255)
                          tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                                                         >  1:1539235/1‑100 (MQ=255)
                          tGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAatatat                                                                         >  1:40216/1‑100 (MQ=255)
                           gAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACAGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATAtt                                                                        >  2:1731012/1‑100 (MQ=255)
                               aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                                                    <  1:149265/100‑1 (MQ=255)
                               aaaGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTg                                                                    <  1:2953479/100‑1 (MQ=255)
                                 aGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTc                                                                  <  1:2378359/100‑1 (MQ=255)
                                    cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGc                                                               <  1:2000437/100‑1 (MQ=255)
                                    cgcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGc                                                               <  1:3041802/100‑1 (MQ=255)
                                     gcgGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGca                                                              <  1:3139738/100‑1 (MQ=255)
                                       ggTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGcaca                                                            >  1:2062452/1‑100 (MQ=255)
                                        gTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACAt                                                           <  1:295266/100‑1 (MQ=255)
                                            cATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAACACATAGCg                                                       >  1:468641/1‑100 (MQ=255)
                                              tGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGAt                                                     <  2:1085175/100‑1 (MQ=255)
                                                ccTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAGGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATag                                                   <  1:2763808/100‑1 (MQ=255)
                                                  ctcATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATagag                                                 <  2:1472355/98‑1 (MQ=255)
                                                    cATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATagagag                                               >  1:1472363/1‑98 (MQ=255)
                                                    cATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTc                                               <  2:2441701/100‑1 (MQ=255)
                                                     aTGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTcc                                              <  1:297724/100‑1 (MQ=255)
                                                     aTGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTcc                                              <  2:2863758/100‑1 (MQ=255)
                                                        cGTCGAACCGTTGGCCGGAGCGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCCCTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAcc                                           <  2:810714/100‑1 (MQ=255)
                                                        cGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCAcc                                           >  1:1371947/1‑100 (MQ=255)
                                                          tCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGt                                         >  2:3159030/1‑100 (MQ=255)
                                                           cGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTc                                        <  1:879589/100‑1 (MQ=255)
                                                           cGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTc                                        >  1:3196104/1‑100 (MQ=255)
                                                             aaCCGTTGGCCGGTGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCg                                      >  1:2181009/1‑100 (MQ=255)
                                                             aaCCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCg                                      <  2:2031331/100‑1 (MQ=255)
                                                                cGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGc                                    <  1:37513/99‑1 (MQ=255)
                                                                 gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcata                                  <  1:975713‑M2/100‑67 (MQ=255)
                                                                 gTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAc                                  >  2:2616154/1‑100 (MQ=255)
                                                                   tGGCCGGATAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGa                                <  2:2816803/100‑1 (MQ=255)
                                                                     gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaacc                              <  1:2755084‑M2/100‑71 (MQ=255)
                                                                     gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAAc                              <  2:2061518/100‑1 (MQ=255)
                                                                     gCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAAc                              <  2:3127272/100‑1 (MQ=255)
                                                                       cGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTGAGCACTACCGACTCAATATATTTTTGTCAGCACATACCGATAGAGTCCACCGTCCGGCACGAACTc                            >  2:1949994/1‑100 (MQ=255)
                                                                       cGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTc                            >  1:2433114/1‑100 (MQ=255)
                                                                         gagaGGGTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctct                          <  1:1238834‑M2/100‑75 (MQ=255)
                                                                         gagaGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCaa                          <  1:506025/100‑1 (MQ=255)
                                                                          agagGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAg                         <  1:1020582/100‑1 (MQ=255)
                                                                          agagGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAg                         >  1:1345185/1‑100 (MQ=255)
                                                                           gagGGTGCTAAGGCCGTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGa                        <  2:15400/100‑1 (MQ=255)
                                                                           gagGGTGCTAAGGCCGCCTCCGGCAAGGTCATCACTACCGACTCAATATCTTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGa                        >  2:891479/1‑100 (MQ=255)
                                                                            agGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGAc                       <  1:1084698/100‑1 (MQ=255)
                                                                             gggTGCTAAGGCCGCCTCCGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttt                      >  2:975708‑M2/1‑22 (MQ=255)
                                                                             gggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACg                      >  1:795106/1‑100 (MQ=255)
                                                                              ggTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCATCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGa                        >  2:1503917/1‑97 (MQ=255)
                                                                                 gCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATgg                  >  1:1380439/1‑100 (MQ=255)
                                                                                 gCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATgg                  >  1:1512823/1‑100 (MQ=255)
                                                                                   tAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGt                <  2:1578560/100‑1 (MQ=255)
                                                                                    aaGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTa               >  2:399559/1‑100 (MQ=255)
                                                                                    aaGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTa               >  2:2261679/1‑100 (MQ=255)
                                                                                     aGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTaa              >  1:2582471/1‑100 (MQ=255)
                                                                                      ggCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAAt             >  2:1460839/1‑100 (MQ=255)
                                                                                      ggCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAAt             >  1:1437804/1‑100 (MQ=255)
                                                                                      ggCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAAt             <  1:2851866/100‑1 (MQ=255)
                                                                                         cttatccgtCcaacggttcgacgcatgcaggcattaaaccgcgtcttttttcagataaaaagctcaatcattcataaaccctctgttttataa                 >  2:2179696‑M2/5‑10 (MQ=255)
                                                                                         cgccTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATa            <  1:166892/98‑1 (MQ=255)
                                                                                           ccTCCGGCAAGGTCAGCACTACCGACACAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcagg        >  1:1975070/1‑100 (MQ=255)
                                                                                            cTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGCCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggc       <  2:2719990/100‑1 (MQ=255)
                                                                                             tCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggca      >  1:1025073/1‑100 (MQ=255)
                                                                                             tCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggca      <  1:511308/100‑1 (MQ=255)
                                                                                              ccGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgc     <  1:750397‑M2/100‑96 (MQ=255)
                                                                                              ccGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgc     <  1:2269337‑M2/100‑96 (MQ=255)
                                                                                               cGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgc     <  1:2080326‑M2/99‑96 (MQ=255)
                                                                                               cGGCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcaaataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcg    >  1:2274187‑M2/1‑4 (MQ=255)
                                                                                               cGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggca      >  1:1819067/1‑98 (MQ=255)
                                                                                               cGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCAGGCACGAACTCAAGACGATGGGTAATAcaggta      >  2:2233692/1‑96 (MQ=255)
                                                                                                ggCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcgc   >  2:3139710‑M2/1‑3 (MQ=255)
                                                                                                ggCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaaacgcgc   >  2:848727‑M2/1‑3 (MQ=255)
                                                                                                ggCGAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATAcaggcaag    >  2:193958/1‑97 (MQ=255)
                                                                                                ggCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACaggcaggc   >  2:117216/1‑100 (MQ=255)
                                                                                                ggCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACaggcaggc   <  2:2567290/100‑1 (MQ=255)
                                                                                                ggCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTAAAGACGATGGGTAATAcaggcagg    >  1:655170/1‑99 (MQ=255)
                                                                                                 gCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcgca  >  1:1072085‑M2/1‑2 (MQ=255)
                                                                                                 gCcaacggttcgacgcatgcaggcatgaaaccgcgtcttttttcagataaaaagcgcaatcattcataaaccctctgttttataatcacttaatcgcgca  >  2:1383202‑M2/1‑2 (MQ=255)
                                                                                                 gCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGgcg  <  2:3196076/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
GTTTATGAATGATTGCGCTTTTTATCTGAAAAAAGACGCGGTTTCATGCCTGCATGCGTCGAACCGTTGGCCGGAGAGGGTGCTAAGGCCGCCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG  >  NC_000913/792199‑792395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.