New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 937227 =NA (NA)9 (0.080) 6/162 NT NA noncoding (4/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 937261 = NA (NA)intergenic (+48/‑111) ftsK/lolA DNA translocase at septal ring sorting daughter chromsomes/lipoprotein chaperone

Only 100 of 155 total aligned reads displayed.

ACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTAATTT  >  NC_000913/937162‑937360
                                                                                                   |                                                                                                   
aCAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAc                                                                                                     <  1:1163964/100‑1 (MQ=255)
 ctctattccaggctaataatcagcttgaggaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAct                                                                                                    >  1:1501142‑M1/65‑100 (MQ=255)
  tttattccagtctaataatcagcttgatgaaagaagaaaatactgaattttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCAct                                                                                                    >  2:2785111‑M1/64‑99 (MQ=255)
   ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActct                                                                                                  >  1:2319862/1‑100 (MQ=255)
   ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActct                                                                                                  >  1:742578/1‑100 (MQ=255)
   ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActct                                                                                                  >  2:745870/1‑100 (MQ=255)
   ctattccaggctaataagcagctggaggaaagaagaaaatactgaatgttcagttgatagagTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActc                                                                                                   >  2:2743187‑M1/63‑99 (MQ=255)
    gggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTa                                                                                                 <  1:153125/100‑1 (MQ=255)
     ggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTAt                                                                                                <  1:1950590/100‑1 (MQ=255)
     ggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTAt                                                                                                >  1:1927412/1‑100 (MQ=255)
       cacaACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCa                                                                                              <  1:2382851/100‑1 (MQ=255)
         caACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTAAGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAAc                                                                                            >  2:2072701/1‑100 (MQ=255)
               tAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaaaa                                                                                      >  2:2355200/1‑100 (MQ=255)
               tAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaaaa                                                                                      >  1:2946313/1‑100 (MQ=255)
                 ttatctgcttgaggagagaagaaaattctgaattttcagttgatagggTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAAt                                                                                     >  1:967361‑M1/49‑99 (MQ=255)
                  tCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                                                   <  1:1291065/100‑1 (MQ=255)
                  tCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                                                   >  2:3155786/1‑100 (MQ=255)
                   tgTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACCGAAAATTCa                                                                                  <  1:1411329/99‑1 (MQ=255)
                   cGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCa                                                                                  >  2:2453355/1‑100 (MQ=255)
                    gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                                                                 <  2:2577199/100‑1 (MQ=255)
                    gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACCGAAAATTCaa                                                                                 >  2:1411321/1‑99 (MQ=255)
                    gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATACATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                                                                 >  2:1744084/1‑100 (MQ=255)
                    gTGAAGTGCTGGCCACACCGCCGTTTGACTAACTAATGAATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                                                                 >  2:1410993/1‑100 (MQ=255)
                      gAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                                                                 >  2:451728/1‑98 (MQ=255)
                      gAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTa                                                                               <  2:520851/100‑1 (MQ=255)
                          tGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCATCCCATCCGGCCCTCTATAAACTAaaaaaacagaa                                                                               >  1:633939/1‑89 (MQ=255)
                           tcTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                                                          <  2:1864939/99‑1 (MQ=255)
                           gCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                                                          >  1:1028580/1‑100 (MQ=255)
                            cTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttct                                                                         >  1:2855871/1‑100 (MQ=255)
                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                                                       >  2:342990/1‑100 (MQ=255)
                              ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATACTGAATTttcagt                                                                       <  1:7636/100‑4 (MQ=255)
                               gCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTtcttct                                                                      <  2:1876724/100‑1 (MQ=255)
                                 cccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCttt                                                                    >  2:1609893/1‑100 (MQ=255)
                                   cACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                                                  >  1:2171262/1‑100 (MQ=255)
                                   cACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                                                  >  1:1922408/1‑100 (MQ=255)
                                   cACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                                                  <  2:714004/100‑1 (MQ=255)
                                    aCCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCt                                                                 <  2:2148265/100‑1 (MQ=255)
                                     ccgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTcc                                                                  <  2:1028575/98‑1 (MQ=255)
                                      cgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCa                                                               >  1:2009333/1‑100 (MQ=255)
                                         cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTGTCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                                                            <  2:1729754/100‑1 (MQ=255)
                                         cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                                                            >  2:846016/1‑100 (MQ=255)
                                           tttGACTAATTAATGCATCGTATGCCGGAGAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAg                                                             <  1:1148202/97‑1 (MQ=255)
                                           tttGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTg                                                          <  2:619881/100‑1 (MQ=255)
                                              gACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatt                                                       <  2:1525768/100‑1 (MQ=255)
                                              gACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGat                                                        <  1:1588869/99‑1 (MQ=255)
                                               actaactaATGCATTGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatta                                                      >  2:1088390/1‑100 (MQ=255)
                                               actaactaATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatta                                                      <  1:2323750/100‑1 (MQ=255)
                                                ctaactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTTCTCAAGCTGatta                                                      <  2:2009321/99‑1 (MQ=255)
                                                ctaactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGattat                                                     >  1:724343/1‑100 (MQ=255)
                                                attttcagttgatagagtgccggatgcgacgctaccgcgccttatccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGattat                                                     >  2:186166‑M2/52‑100 (MQ=255)
                                                  aactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGAttatta                                                   <  2:2729802/100‑1 (MQ=255)
                                                  aactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGAttatta                                                   >  2:1565090/1‑100 (MQ=255)
                                                   actaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAg                                                  >  1:225601/1‑100 (MQ=255)
                                                    ctaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGc                                                 >  2:1066444/1‑100 (MQ=255)
                                                    ctaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGc                                                 <  1:1642502/100‑1 (MQ=255)
                                                       aTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTg                                              <  2:2906403/100‑1 (MQ=255)
                                                       aTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTg                                              <  2:232130/100‑1 (MQ=255)
                                                          cATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGaa                                           <  2:1682020/100‑1 (MQ=255)
                                                              gTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATGTTCTTCTTGCCTCAAGCGGATTATTAGCCTGGAATag                                        >  2:1119639/1‑99 (MQ=255)
                                                               tATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagag                                      >  1:3128159/1‑100 (MQ=255)
                                                                gtgccggatgcgacgctaccgcgccttatccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagaga                                     >  2:1554608‑M2/36‑100 (MQ=255)
                                                                aTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagaga                                     >  1:415636/1‑100 (MQ=255)
                                                                 TGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagagag                                    <  1:1274021‑M1/100‑1 (MQ=255)
                                                                 TGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagagag                                    >  2:1107583‑M1/1‑100 (MQ=255)
                                                                  gccggatgcgacgctaccgcgccttatccggcaCTCTATCAACTGACAATTCAGTATTTTCTTCTTTCTTCAAGCTGACTATTAGCCTGGAATagagag                                    >  2:2595830‑M2/34‑99 (MQ=255)
                                                                  gccggatgcgacgctaccgcgccttatccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGt                                   >  2:176893‑M2/34‑100 (MQ=255)
                                                                  GCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGt                                   <  2:362114‑M1/100‑1 (MQ=255)
                                                                     GGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTaga                                <  2:1216381‑M1/100‑1 (MQ=255)
                                                                       ATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAgg                              >  2:964730‑M1/1‑100 (MQ=255)
                                                                        TAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAggg                             >  2:3110137‑M1/1‑100 (MQ=255)
                                                                         aaGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGa                            <  2:1922396/100‑1 (MQ=255)
                                                                         aaGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGa                            >  2:2813960/1‑100 (MQ=255)
                                                                          aGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGaa                           >  1:2059988/1‑100 (MQ=255)
                                                                          aGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGaa                           >  1:2912716/1‑100 (MQ=255)
                                                                          aGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGaa                           >  1:505873/1‑100 (MQ=255)
                                                                          aGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGaa                           >  2:1047152/1‑100 (MQ=255)
                                                                           ggCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGaa                           >  1:516187/1‑99 (MQ=255)
                                                                           ggCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAAc                          >  1:102253/1‑100 (MQ=255)
                                                                            gcgcGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACt                         <  2:1274013/100‑1 (MQ=255)
                                                                             cgcgGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTc                        >  2:2268627/1‑100 (MQ=255)
                                                                               cgGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTccc                      <  1:964291/100‑1 (MQ=255)
                                                                               cgGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTccc                      <  1:3155814/100‑1 (MQ=255)
                                                                                ggTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCg                     <  2:2857098/100‑1 (MQ=255)
                                                                                    gCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCg                 <  1:1744096/100‑1 (MQ=255)
                                                                                    gCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCg                 >  2:429386/1‑100 (MQ=255)
                                                                                    gCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCg                 <  2:63021/100‑1 (MQ=255)
                                                                                      tccgatctcggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCggg               <  1:697777‑M2/87‑1 (MQ=255)
                                                                                       tCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGa              <  2:2912691/100‑1 (MQ=255)
                                                                                        cGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAg             <  2:1374521/100‑1 (MQ=255)
                                                                                         gCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAg             >  2:1480691/1‑99 (MQ=255)
                                                                                          cATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGCATAGAGAGCTGAGGGAACTCCCGATCGGGCGTg           >  2:2202605/1‑100 (MQ=255)
                                                                                          cATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTg           <  1:2502031/100‑1 (MQ=255)
                                                                                           atccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGagttc          <  1:923489‑M2/92‑3 (MQ=255)
                                                                                           atccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGGGTGa          <  2:955297‑M2/92‑1 (MQ=255)
                                                                                            tccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGAc         <  1:1847075‑M2/93‑1 (MQ=255)
                                                                                             ccggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGa          >  1:630691‑M2/7‑98 (MQ=255)
                                                                                              cggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGAtcgggagatcgga       >  2:697776‑M2/6‑94 (MQ=255)
                                                                                               ggcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCgggagttccct       <  1:2697447‑M2/95‑6 (MQ=255)
                                                                                                gcaCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTa      <  2:742577‑M2/96‑1 (MQ=255)
                                                                                                   ctctATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTAAttt  <  2:2319846/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAGTAGAGGGAACTCCCGATCGGGAGTGACGTAATTT  >  NC_000913/937162‑937360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.