New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1357753NA (NA)6 (0.060) 5/160 NT NA intergenic (‑85/+49) ymjA/puuP DUF2543 family protein/putrescine importer
?NC_000913 = 1357792 NA (NA)noncoding (23/30 nt) REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 138 total aligned reads displayed.

TAAGCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTA  >  NC_000913/1357693‑1357890
                                                                                                   |                                                                                                  
tAAGCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGC                                                                                                    <  2:3212771‑M2/100‑1 (MQ=255)
   gCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATc                                                                                                 >  1:3014452/1‑100 (MQ=255)
    cATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATcc                                                                                                >  2:21371/1‑100 (MQ=255)
     aTAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCg                                                                                               >  2:685977/1‑100 (MQ=255)
     aTAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCg                                                                                               <  2:327398/100‑1 (MQ=255)
      tAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGa                                                                                              >  2:525974/1‑100 (MQ=255)
      tAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGa                                                                                              >  2:1702701/1‑100 (MQ=255)
       aaGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGAc                                                                                             >  1:857133/1‑100 (MQ=255)
          ggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTAt                                                                                          >  1:222591/1‑100 (MQ=255)
              gatgatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACg                                                                                      <  2:1433270/100‑1 (MQ=255)
               atgatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGt                                                                                     <  1:2225409/100‑1 (MQ=255)
                 gatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGttt                                                                                   >  1:1080707/1‑100 (MQ=255)
                 gatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGttt                                                                                   >  2:1236363/1‑100 (MQ=255)
                 gatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGttt                                                                                   <  1:377426/100‑1 (MQ=255)
                  atAGCGCTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtc                                                                                  <  1:563186/100‑1 (MQ=255)
                  atAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtc                                                                                  >  1:1341770/1‑100 (MQ=255)
                   tAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtca                                                                                 >  2:1514463/1‑100 (MQ=255)
                   tAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtca                                                                                 >  1:1759078/1‑100 (MQ=255)
                    aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                <  1:704330/100‑1 (MQ=255)
                    aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                <  1:3175319/100‑1 (MQ=255)
                    aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                >  1:2161645/1‑100 (MQ=255)
                     gCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGtataa                                                                                 >  1:1648436/1‑94 (MQ=255)
                     gCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcact                                                                               >  2:899957/1‑100 (MQ=255)
                       aCTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcactca                                                                             >  1:2168345/1‑100 (MQ=255)
                         tCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcacccac                                                                            >  1:316333/1‑99 (MQ=255)
                            tGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCgg                                                                         >  2:40337/1‑99 (MQ=255)
                             naTCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCg                                                                       >  1:1621107/2‑100 (MQ=255)
                              aTCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGt                                                                      <  1:2095530/100‑1 (MQ=255)
                              aTCCGGGTCATACATCTTTTTATAGTTAATGGCGCCGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCg                                                                          >  2:770713/1‑96 (MQ=255)
                              aTCCGGGTCATACATCTTTTTATAGTTAATGGAGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCg                                                                       >  1:3087119/1‑99 (MQ=255)
                               tCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGtt                                                                     >  2:1765030/1‑100 (MQ=255)
                                ccGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTTACTCACCGGCGTTc                                                                    >  2:2405957/1‑100 (MQ=255)
                                 cGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCt                                                                   <  1:2354016/100‑1 (MQ=255)
                                 cGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCt                                                                   >  1:3006894/1‑100 (MQ=255)
                                  gggTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTc                                                                    <  2:375781/98‑1 (MQ=255)
                                  gggTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTg                                                                  >  1:2059678/1‑100 (MQ=255)
                                   ggTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGt                                                                 >  2:2633685/1‑100 (MQ=255)
                                    gTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTc                                                                <  2:1560949/100‑1 (MQ=255)
                                    gTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTc                                                                >  1:1366080/1‑100 (MQ=255)
                                     tCATACATCTTTTTATAGTTAATGGCGCGTCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGTCGTTCTGTCa                                                               <  2:2513871/100‑1 (MQ=255)
                                      cATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCAc                                                              <  1:2378380/100‑1 (MQ=255)
                                       aTACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCAcc                                                             >  1:2745067/1‑100 (MQ=255)
                                        tACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCTCTCACCGGCGTTCTGTCACca                                                            <  2:2856248/100‑1 (MQ=255)
                                        tACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACca                                                            >  1:2809963/1‑100 (MQ=255)
                                        tACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACca                                                            >  2:2429297/1‑100 (MQ=255)
                                        tACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACca                                                            <  1:1232735/100‑1 (MQ=255)
                                        tACATCTTTTTATAGTTAATGGCGCGGAGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTAACCGGCGTTCTGTCAcc                                                             >  2:363458/1‑99 (MQ=255)
                                         aCATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTTACcat                                                           >  1:39235/1‑100 (MQ=255)
                                          cATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatc                                                          >  2:2205673/1‑100 (MQ=255)
                                          cATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatc                                                          >  1:1485464/1‑100 (MQ=255)
                                           aTCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatca                                                         <  2:1539104/100‑1 (MQ=255)
                                               ttttATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACa                                                     >  1:436997/1‑100 (MQ=255)
                                               ttttATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACa                                                     <  1:2429313/100‑1 (MQ=255)
                                                tttATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCcattaactataaaaagatgtatgacccggatcacgagtgctatcatc                                                     <  2:1117237‑M2/99‑48 (MQ=255)
                                                 ttATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAAc                                                   >  2:2043754/1‑100 (MQ=255)
                                                 ttATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTAACTCACCGGCGTTCTGTCACAATCATACAAc                                                   >  2:2045274/1‑100 (MQ=255)
                                                   ataGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACgg                                                 >  2:162019/1‑100 (MQ=255)
                                                   ataGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAAAGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACgg                                                 <  2:2283437/100‑1 (MQ=255)
                                                    taGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGc                                                <  2:735397/100‑1 (MQ=255)
                                                     aGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCa                                               >  2:3043104/1‑100 (MQ=255)
                                                      gTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCAc                                              >  1:3064877/1‑100 (MQ=255)
                                                      gTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCAc                                              <  1:249160/100‑1 (MQ=255)
                                                      gTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCAc                                              >  2:1060103/1‑100 (MQ=255)
                                                      gTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCAc                                              <  1:3110710/100‑1 (MQ=255)
                                                           tGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGc                                         <  2:1657005/100‑1 (MQ=255)
                                                             gcgcggcgcgTTACCCTCAGGCAGGATAATGCGCCGCGCcattaactataaaaagatgtatgacccggatcacgagtgctatcatccgcccttatgctta                                       <  1:2537272‑M2/100‑62 (MQ=255)
                                                              cgcggcgcgTTACCCTCAGGCAGGATAATGCGCCGCGCcattaactataaaaagatgtatgacccggatcacgagtgctatcatccgcccttatgcttag                                      <  1:153065‑M2/100‑63 (MQ=255)
                                                              cgcggcgcgTTACCCTCAGGCAGGATAATGCGCCGCGCcattaactataaaaagatgtatgacccggatcacgagtgctatcatccgcccttatgcttag                                      <  1:17435‑M2/100‑63 (MQ=255)
                                                              cgcggcgcgTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGAt                                      <  1:904243/100‑1 (MQ=255)
                                                               gcggcgcgTTACCCTCAGGCAGGATAATGCGCCGCGCcattaactataaaaagatgtatgacccggatcacgagtgctatcatccgcccttatgcttagc                                     <  1:2851710‑M2/100‑64 (MQ=255)
                                                               gcggcgcgTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGAt                                      >  1:1812276/1‑99 (MQ=255)
                                                                 ggcgcgTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgc                                   <  1:2633706/100‑1 (MQ=255)
                                                                   ccctttACCCTCAGGCAGGATAATGCGCCTCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                    <  2:3103482/93‑1 (MQ=255)
                                                                    gcgTTACCCTCAGGCAGGATAATGCGCCGCGCcattaactataaaaagatgtatgacccggatcacgagtgctatcatccgcccttatgcttagcgcat                                 <  2:2201196‑M2/99‑68 (MQ=255)
                                                                      gTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGcggcgg                              >  1:2859635/1‑100 (MQ=255)
                                                                         aCCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGGTAGCGGCGGATc                           <  1:2130193/100‑1 (MQ=255)
                                                                          cccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCa                          >  2:2646428/1‑100 (MQ=255)
                                                                          cccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCa                          <  1:1993094/100‑1 (MQ=255)
                                                                          cccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCa                          <  1:2576363/100‑1 (MQ=255)
                                                                            cTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGa                        >  1:1013710/1‑100 (MQ=255)
                                                                              caggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATa                      <  2:1366072/100‑1 (MQ=255)
                                                                              caggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATa                      <  2:2168329/100‑1 (MQ=255)
                                                                               aggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATAc                     <  1:882432/100‑1 (MQ=255)
                                                                                ggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATAcc                    <  1:685978/100‑1 (MQ=255)
                                                                                ggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATAcc                    <  2:1648426/100‑1 (MQ=255)
                                                                                    ggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATaa                <  1:2105488/100‑1 (MQ=255)
                                                                                      aTAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAat              >  2:555396/1‑100 (MQ=255)
                                                                                       tAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAata             <  1:208294/100‑1 (MQ=255)
                                                                                        aaTGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAatat            >  1:1414970/1‑100 (MQ=255)
                                                                                         aTGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATg           <  2:2059663/100‑1 (MQ=255)
                                                                                          tGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATgc          >  2:1899841/1‑100 (MQ=255)
                                                                                          tGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGCTCTGTCACCATCATACAACGGCACTTTGCGCTAGCGGCGGATCAGACACCATAAATATgc          >  2:824290/1‑100 (MQ=255)
                                                                                            cgccgcGCATCCGACTATTACGTTTCACTCACCCGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATgcgc        >  2:1948983/1‑100 (MQ=255)
                                                                                              ccgcgccattaactataaaaagatgtatgacccggatcacgagtgctatcatccgcccttatgcttagcgcattaaccccaggggcaaataatgaaccac      <  2:3226220‑M2/100‑95 (MQ=255)
                                                                                              ccgcGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGcgccg      <  2:1747653/100‑1 (MQ=255)
                                                                                               cgcgccattaactataaaaagatgtatgacccggatcacgagtgctatcatccgcacttatgcttagcgaattaaccccagcggcaaataatgaaccacg     <  2:2855309‑M2/100‑96 (MQ=255)
                                                                                               cgcgCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGcgccgc     >  2:2745706/1‑100 (MQ=255)
                                                                                                gcgcATCCGACTATTACGTTCCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCgccgcc    >  1:3096154/1‑100 (MQ=255)
                                                                                                  gcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCCTACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTa  <  1:1575558/100‑1 (MQ=255)
                                                                                                  gcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTa  >  1:60711/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
TAAGCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTA  >  NC_000913/1357693‑1357890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.