BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2835067 =	NA (NA)	9 (0.080)	3/164	NT	NA	noncoding (1/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	2835099 =	NA (NA)	9 (0.080)	3/164	NT	NA	noncoding (33/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 183 total aligned reads displayed.

TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835000‑2835198

 cGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    >  2:2885240/1‑100 (MQ=255)

  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTTGGCTACTGTGCCTAAAATGTCGTATGCCACGCTGGCGCGTCTTATCCGACCTa                                                                                                   >  1:2999354/1‑100 (MQ=255)

  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                   >  1:1104833/1‑100 (MQ=255)

  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                   >  2:238910/1‑100 (MQ=255)

  ggATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTa                                                                                                   >  2:545694/1‑100 (MQ=255)

   gATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTAc                                                                                                  >  2:3169792/1‑100 (MQ=255)

     tGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgg                                                                                                >  2:1674068/1‑100 (MQ=255)

       aaaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                                                              <  1:1774891/100‑1 (MQ=255)

        aaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGa                                                                                             <  2:3044465/100‑1 (MQ=255)

        aaGAGGCATTTGGATTGTTGAAAACAGTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGa                                                                                             >  1:1982631/1‑100 (MQ=255)

            ggCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGc                                                                                          >  2:524817/1‑99 (MQ=255)

            ggCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCAACCTACGGGGACGCa                                                                                         >  1:995881/1‑100 (MQ=255)

            ggCATTTGGATTGTTGAAAACATTGCCGAGGTAGGGGGGCGACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCa                                                                                         <  1:1115231/100‑1 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       <  1:2602191/100‑1 (MQ=255)

               aTTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       >  1:568927/1‑99 (MQ=255)

               aTTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGACTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       <  1:1938718/99‑1 (MQ=255)

                    gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGg                                                                                 >  2:2143817‑M1/1‑99 (MQ=255)

                       tgttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccg                                                                              <  2:3195597‑M1/100‑5 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                             >  1:453477‑M1/1‑95 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                             <  1:1263672‑M1/100‑6 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccgg                                                                             >  2:2484370‑M1/1‑95 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCAACCTACGGGGACGCATGTGTAGgccgg                                                                             >  1:1249310‑M1/1‑95 (MQ=255)

                          tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                           >  1:2788072‑M1/1‑93 (MQ=255)

                          tgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggat                                                                           >  2:449761‑M1/1‑93 (MQ=255)

                           gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                          <  1:1805468/100‑1 (MQ=255)

                           gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                          >  1:1346105/1‑100 (MQ=255)

                           gAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATa                                                                          >  2:372976/1‑100 (MQ=255)

                              aaCATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAgg                                                                       <  1:1674080/100‑1 (MQ=255)

                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     >  1:2416755/1‑100 (MQ=255)

                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     >  1:2523621/1‑100 (MQ=255)

                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     <  1:567316/100‑1 (MQ=255)

                                  ttGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGtt                                                                   <  2:2983196/100‑1 (MQ=255)

                                   tGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGAATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGttt                                                                  >  1:2293821/1‑100 (MQ=255)

                                      cGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcg                                                               <  2:1141954/100‑1 (MQ=255)

                                       gATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgc                                                              >  1:1375105/1‑100 (MQ=255)

                                        aTGTAGGTGGGCTACTGTGTCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  1:320026/100‑1 (MQ=255)

                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  2:139919/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            <  2:2595571/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            <  1:2031140/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            <  2:2900057/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            >  2:973681/1‑100 (MQ=255)

                                          gTAGGTGGGCTACTGTGCCTAAAATGGCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccgc                                                           <  2:923737/100‑1 (MQ=255)

                                           tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          <  1:2345941‑M2/100‑1 (MQ=255)

                                           tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCA                                                          <  1:1281749‑M2/100‑1 (MQ=255)

                                           tAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGACGGATAAGGCGTTTACGCCGCA                                                          <  1:818381‑M2/100‑1 (MQ=255)

                                             ggTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATC                                                        <  1:2625637‑M2/100‑1 (MQ=255)

                                               tGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCG                                                      <  1:369355‑M2/100‑1 (MQ=255)

                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccgg                                                     <  1:645102‑M1/100‑30 (MQ=255)

                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccgg                                                     <  1:1397957‑M1/100‑30 (MQ=255)

                                                gggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG                                                     <  2:2677577‑M2/100‑1 (MQ=255)

                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                    <  1:1165169‑M2/100‑1 (MQ=255)

                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC                                                    <  2:1298015‑M2/100‑1 (MQ=255)

                                                  gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                   <  1:2484386/100‑1 (MQ=255)

                                                  gCTACTGTGCCTAAAATGTCGGATGCGACGCTAGCGCGTGTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATGCGGCa                                                   >  2:2176883/1‑100 (MQ=255)

                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGgccggatgcggcgtaaacgccttatccggcctac                                                <  1:2770553‑M1/100‑35 (MQ=255)

                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                >  1:140164/1‑100 (MQ=255)

                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                <  1:2105429/100‑1 (MQ=255)

                                                      cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATgg                                               <  1:958394/100‑1 (MQ=255)

                                                      cTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTCTACGCCGCATCCGGCAATgg                                               <  2:1982619/100‑1 (MQ=255)

                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:811656/1‑100 (MQ=255)

                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          >  2:3191572/1‑100 (MQ=255)

                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          >  2:3255128/1‑100 (MQ=255)

                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCAGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          >  1:135668/1‑100 (MQ=255)

                                                             tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaa                                        >  1:1055371/1‑100 (MQ=255)

                                                             tAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGAGTTTACGCCGCATCCGGCAATGGTGTCCaa                                        >  1:2714529/1‑100 (MQ=255)

                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       >  2:2512867/1‑100 (MQ=255)

                                                               aaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAAt                                      <  2:2417686/100‑1 (MQ=255)

                                                               aaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAAt                                      <  1:1864804/100‑1 (MQ=255)

                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   <  1:2470980/100‑1 (MQ=255)

                                                                  tGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   <  1:1612623/100‑1 (MQ=255)

                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   >  1:1643206‑M1/1‑99 (MQ=255)

                                                                     cggataagacgcgccagcgtcttatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAaca                                >  2:2842603‑M2/31‑100 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  1:1329731‑M2/30‑100 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  2:71152‑M2/30‑100 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAaca                                >  2:2584987‑M2/30‑99 (MQ=255)

                                                                       gataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                              >  2:1249958‑M2/29‑100 (MQ=255)

                                                                       gataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                              >  1:622374‑M2/29‑100 (MQ=255)

                                                                       gataagacgcgccagcgtcgaatccgacCTACGGGGACGCATATCTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTTTCCAAATGCAACACg                              >  1:1034536‑M2/29‑100 (MQ=255)

                                                                          gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           <  1:1835079/100‑1 (MQ=255)

                                                                          gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           <  1:326904/100‑1 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCCATGGTGTCCAAATGCAACACGtttt                          >  2:420135/1‑100 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  1:1579244/1‑100 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  2:2349015/1‑100 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  2:1849408/1‑100 (MQ=255)

                                                                            gACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTa                         >  2:1043153/1‑100 (MQ=255)

                                                                              cGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATc                       <  1:2964204/100‑1 (MQ=255)

                                                                              cGCTGGCGCGTCTTATCCGACCTACGCGGACCCATGTGTAGGCCGGATAAGGCGTTTACGCCGCGTCCGGCAATGGTGTCCAAATGCAACACGTTTTAtn                       <  1:1439563/100‑2 (MQ=255)

                                                                              cGCTGGCGCGCCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGCCAATGGTGTCCAAATGCAACACGTTTTATc                       <  2:2129157/100‑1 (MQ=255)

                                                                                   gcgcGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTc                  <  2:1375097/100‑1 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCt                 <  1:1298023/100‑1 (MQ=255)

                                                                                     gcgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTg                <  1:1513697/100‑1 (MQ=255)

                                                                                        tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             >  1:2170099/1‑100 (MQ=255)

                                                                                          ttATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACtt           <  2:1823898/100‑1 (MQ=255)

                                                                                           tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc          >  1:3126219/1‑100 (MQ=255)

                                                                                           tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc          <  1:2947401/100‑1 (MQ=255)

                                                                                           tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc          <  1:2411034/100‑1 (MQ=255)

                                                                                           tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc          >  2:3124976/1‑100 (MQ=255)

                                                                                             tccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGCGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAc        <  1:1877062‑M2/94‑1 (MQ=255)

                                                                                              ccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCa         >  1:995079‑M2/6‑98 (MQ=255)

                                                                                                  cCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCt   <  1:3179545‑M2/99‑1 (MQ=255)

TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835000‑2835198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.