| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,048 | G→T | 23.3% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 23.3% | 595.5 / 164.9 | 246 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (70/114); new base T (49/6); total (126/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.62e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.88e-01 | |||||||||||
Only 100 of 249 total aligned reads displayed.
TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705949‑3706146 | cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAg < 1:3028648/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAg < 1:2768602/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAgcg > 2:2536623/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCa < 1:2319709‑M2/100‑2 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCatc < 1:1243170‑M2/100‑4 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCatca > 1:2578396‑M2/1‑96 (MQ=255) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:141498/4‑100 (MQ=17) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑TTATGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:2064445/4‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAgg > 1:1066213/3‑99 (MQ=21) aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTGGTAGGCCTGATGCGCGGCGCTTATCAGGc < 1:2180039/100‑1 (MQ=21) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:1574772/1‑100 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:1677161/1‑100 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:346974/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:1546718/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:1544029/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:758786/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:628195/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2496663/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑ACACGTAGGCCTGATAAGCGAAGCGCATCAGGCa > 1:2719297/2‑100 (MQ=18) ggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCa > 2:3142817/2‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2426375/1‑99 (MQ=18) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTGCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtt < 1:73055/100‑1 (MQ=255) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:3245867/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:2054670/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:125044/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGCA‑GAGA‑TCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 2:2154284/7‑100 (MQ=14) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGCA‑GAGA‑TTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 2:2741940/7‑100 (MQ=17) gataaggcgTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt < 1:478085/95‑1 (MQ=21) ataaggcgTTTACGCCTTATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGGGC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAatttta > 2:852679/5‑99 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:1203661/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:493807/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:2862721/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:3156448/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc < 2:592659/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 1:1487863/1‑100 (MQ=255) ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt > 2:513034/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:1574763/100‑1 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt > 1:1136216/1‑99 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 2:1807535/100‑1 (MQ=255) tAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa > 2:1455542/1‑100 (MQ=255) cGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa > 2:3089330/1‑100 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 1:2458775/100‑1 (MQ=255) aTCCGGCCTAT‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:42761/100‑1 (MQ=255) cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 2:1188646/100‑1 (MQ=255) cTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCt > 1:1621840/1‑100 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:1397043/1‑100 (MQ=255) aaaaTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 2:1651247/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:407171/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCGTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:3036559/100‑1 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTagatcggaa > 2:2420668/1‑92 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg > 1:3237323/1‑100 (MQ=255) aaaTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa < 1:877622/99‑1 (MQ=255) aaaTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 2:107808/100‑1 (MQ=255) aaTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa < 2:877360/100‑1 (MQ=255) aTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 1:2536641/100‑1 (MQ=255) tCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:771543/100‑1 (MQ=255) cAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 1:898533/100‑1 (MQ=255) cAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 1:234274/100‑1 (MQ=255) aaTACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCTATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGAc > 2:1836600/1‑100 (MQ=255) gCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa < 2:2947838/100‑1 (MQ=255) cA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa > 2:407211/1‑100 (MQ=255) cA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa > 1:845539/1‑100 (MQ=255) gAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 2:2027922/100‑1 (MQ=255) ccgatctcgtaggCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgc < 2:1513200‑M1/94‑64 (MQ=255) aaT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg < 2:222898/100‑1 (MQ=255) aaT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg < 1:178610/100‑1 (MQ=255) t‑tttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt < 1:1658622/100‑1 (MQ=255) tttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATTGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:1879458/95‑1 (MQ=255) tCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGtt < 1:1917657/100‑1 (MQ=255) cGTAGGCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatcc < 1:1738871‑M2/100‑78 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccg > 2:1654213‑M1/1‑29 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg > 1:667050/1‑100 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 1:1087684/100‑1 (MQ=255) tAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGTCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 2:1287815/99‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:96943/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:1691153/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 2:1544183/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:1112885/100‑1 (MQ=255) ttccgatctaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt < 2:803631/91‑1 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggca > 2:1489341‑M1/1‑26 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggca > 2:322014‑M1/1‑26 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTATTGTATGGCTTTTAATTATTCGATAGAGACGATTTCGAAGTGATGTTTGCCt > 2:543353/1‑100 (MQ=255) gCCTGATAAGCGTAGCGCatcaggcctacaaggtttctgcaatatattgaattagcacgattttgtaggccggataaggcgtttacgctgcatccggcat < 1:594502‑M2/100‑83 (MQ=255) gCCTGATAAGCGTAGCGCatcaggcctacaaggtttctgcaatatattgaattagcacgattttgtaggccggataaggcgtttacgccgcatccggcat < 2:90364‑M2/100‑83 (MQ=255) gCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcat < 2:96290‑M2/100‑83 (MQ=255) gCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcat < 1:1186655‑M2/100‑83 (MQ=255) gCCTGATAAGCGGAGCGCatcaggcctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggcat < 1:1992686‑M2/100‑83 (MQ=255) ccTGATAAGCGTAGCGCatcaggcctacaaggtttctgcaatatattgaattagcacgattttgtaggccggataaggcgtttacgccgcatccggcata < 1:2119614‑M2/100‑84 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcata > 2:173377‑M1/1‑24 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcata > 2:1954015‑M1/1‑24 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa > 1:2673882/1‑100 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa > 1:2979237/1‑100 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa > 1:3180543/1‑100 (MQ=255) cTGATAAGCGGAGCGCATCAGGCATTTTTTTTTTTTTTTTTTTTCTTGTATGGCTGTTAATTATTTGATAGAGACGTTTTGGAAGTGATGTTTGCCttct > 2:3153354/1‑97 (MQ=255) tGATAAGCGGAGCGTATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 2:1605472/100‑1 (MQ=255) tAAGCGTAGCGCATCAGGCctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaa > 2:360169‑M1/1‑19 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATTGATCa > 2:2968442/1‑100 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 1:1277038/1‑100 (MQ=255) cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc > 1:227621/1‑100 (MQ=255) ggAGCGCATCAGGCATTTTTTTTTTTTTTTTCATTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc > 2:1361042/1‑100 (MQ=255) | TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACC > NC_000913/3705949‑3706146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |