| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,053,516 | (G)6→7 | coding (2663/2745 nt) | torS ← | hybrid sensory histidine kinase in two‑component regulatory system with TorR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,053,510 | 1 | . | G | 98.9% | 331.1 / ‑2.6 | 90 | coding (2669/2745 nt) | torS | hybrid sensory histidine kinase in two‑component regulatory system with TorR |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (47/42); total (48/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
GTTCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATGCGC > NC_000913/1053411‑1053604 | gttCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGaa > 1:2559458/1‑100 (MQ=255)gttCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGaa > 1:2384019/1‑100 (MQ=255) ttCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑g < 2:1946389/100‑1 (MQ=255) tCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑gg < 2:2070758/100‑1 (MQ=255) cTTAACTGGCTGATATTGACTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggg > 1:2146468/1‑100 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggggg < 2:2595199/100‑1 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggggg > 2:755488/1‑100 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggggg > 1:1539667/1‑100 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggggg > 2:687487/1‑100 (MQ=255) tAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggggg < 1:2062603/100‑1 (MQ=255) aCTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggggggg > 1:2185354/1‑99 (MQ=255) aCTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑ggggggg < 2:1922226/100‑2 (MQ=255) cTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑gggggggc < 2:1540386/100‑3 (MQ=255) cTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑gggggggc < 1:202987/100‑3 (MQ=255) cTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGCGGAA‑‑gggggggc < 2:1855706/100‑3 (MQ=255) tGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑gggggggca < 1:1635940/100‑4 (MQ=255) cTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCCACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGAt > 1:647385/1‑100 (MQ=255) tGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATa < 2:2571798/100‑1 (MQ=255) tGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATa > 2:1127186/1‑100 (MQ=255) tGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATa > 2:708374/1‑100 (MQ=255) gATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATaa > 2:2545018/1‑100 (MQ=255) gATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATaa > 1:1967219/1‑100 (MQ=255) gATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATaa < 1:1353744/100‑1 (MQ=255) ttGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgc > 1:800158/1‑100 (MQ=255) ttGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgc > 2:2117060/1‑100 (MQ=255) tGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgct < 2:339362/100‑1 (MQ=255) tGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgct < 2:2292186/100‑1 (MQ=255) tGATTCAAATCGCGTTCAGGTCTTTCGTATGCAACCATGCTTCCAGGGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgct < 1:2583581/100‑1 (MQ=255) gATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgctg > 1:2404842/1‑100 (MQ=255) gATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑GGGGGGCAGATAATGgctgc > 2:2091006/1‑100 (MQ=255) aTTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgctgc > 2:568968/1‑100 (MQ=255) tCAAATCTCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgctgctg > 2:1490262/1‑100 (MQ=255) aaaTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGgctgctgct < 1:2445009/100‑1 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTcc > 2:2697181/1‑100 (MQ=255) aTCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTcc < 2:1889005/100‑1 (MQ=255) tCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCa < 2:2265928/100‑1 (MQ=255) gcgTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGt < 1:520616/100‑1 (MQ=255) gcgTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGt > 2:267803/1‑100 (MQ=255) cgTTGAGGTCTTTCTTATGCAACCATGCATCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAAATAATGGCTGCTGCTCCAGtt < 1:195205/100‑1 (MQ=255) gTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTtg > 2:1891932/1‑100 (MQ=255) gTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTtg < 2:71942/100‑1 (MQ=255) gTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTtg > 2:898534/1‑100 (MQ=255) gTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTtg < 1:1106112/100‑1 (MQ=255) tCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTtgtg < 2:271427/100‑1 (MQ=255) tCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTtgtg > 1:513978/1‑100 (MQ=255) cAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTgc < 1:2330402/100‑1 (MQ=255) cAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTgc > 1:2346153/1‑100 (MQ=255) ggTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTgcgc < 2:2071366/100‑1 (MQ=255) ggTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTgcgc > 2:520369/1‑100 (MQ=255) ggTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTgcgc > 2:632816/1‑100 (MQ=255) gTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCa > 2:1411280/1‑100 (MQ=255) ctttcttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATa > 2:2324730/1‑100 (MQ=255) tttcttATGCAACCATGCTTCCAGAGCGGGAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATa < 1:526029/99‑1 (MQ=255) tcttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgct > 2:1407363/1‑100 (MQ=255) cttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctg > 2:927146/1‑100 (MQ=255) cttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctg > 1:1791863/1‑100 (MQ=255) ttATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctgg < 1:755482/100‑1 (MQ=255) tATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCCGTTGTGCGCATAgctggc > 2:1863945/1‑100 (MQ=255) aTGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggct > 1:799383/1‑100 (MQ=255) tGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggctg > 2:188076/1‑100 (MQ=255) tGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAgctggctg > 2:1593631/1‑100 (MQ=255) cAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCtggctggc > 2:1234551/1‑100 (MQ=255) cAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCtggctggc > 2:2280747/1‑100 (MQ=255) aCCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGa > 2:1177537/1‑100 (MQ=255) ccATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGat > 2:1007435/1‑100 (MQ=255) aTGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGatat < 1:2171823/100‑1 (MQ=255) aTGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGatat < 2:613794/100‑1 (MQ=255) tGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGatat < 1:71903/99‑1 (MQ=255) tGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATg < 2:2445870/100‑1 (MQ=255) tGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATg < 2:1788186/100‑1 (MQ=255) ttCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCAt < 2:2346172/100‑1 (MQ=255) nccAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCAtt > 1:2019739/2‑100 (MQ=255) cAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTcc > 2:2240037/1‑100 (MQ=255) gagCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCa > 1:1061289/1‑100 (MQ=255) gCGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGa > 1:2422657/1‑100 (MQ=255) cGGCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGAc < 2:1729423/100‑1 (MQ=255) gCAACACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGGCTc > 1:2596304/1‑100 (MQ=255) aaCACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGa < 1:2345707/100‑1 (MQ=255) aaCACTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGa < 1:445048/100‑1 (MQ=255) acacTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAg < 1:27620/100‑1 (MQ=255) acacTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAg < 2:1967234/100‑1 (MQ=255) cacTGCGTGTAATTTCTTCGTGTGGAAGGGGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAg > 1:968679/1‑100 (MQ=255) cacTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGc < 1:1277211/100‑1 (MQ=255) ccgatctgtAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCa < 2:901106/94‑1 (MQ=255) acTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCa > 2:2291498/1‑100 (MQ=255) acTGCGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCa < 2:1010434/100‑1 (MQ=255) cGTGTAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTg < 2:211033/100‑1 (MQ=255) gtgtAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGc > 2:2778890/1‑100 (MQ=255) gtgtAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGc < 1:907683/100‑1 (MQ=255) gtAATTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCaagatcgg > 1:901099/1‑94 (MQ=255) aaTTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttt > 2:2326261/1‑99 (MQ=255) aaTTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCtt < 1:927139/98‑1 (MQ=255) aTTTCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCttttt < 2:2456046/100‑1 (MQ=255) tttCTTCGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTa < 2:865713/100‑1 (MQ=255) ttcGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTg > 2:2524195/1‑100 (MQ=255) ttcGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTg < 1:1234543/100‑1 (MQ=255) tcGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGa > 1:1860393/1‑100 (MQ=255) cGTGTGGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGAt < 2:913505/100‑1 (MQ=255) tgtgGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATgc > 1:1150856/1‑100 (MQ=255) gtgGAAG‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATgcg > 2:1017334/1‑100 (MQ=255) | GTTCTTAACTGGCTGATATTGATTCAAATCGCGTTCAGGTCTTTCTTATGCAACCATGCTTCCAGAGCGGCAACACTGCGTGTAATTTCTTCGTGTGGAA‑‑GGGGGGCAGATAATGGCTGCTGCTCCAGTTGTGCGCATAGCTGGCTGGCGATATGCATTCCCAGACTCGAGCAACTGCTTTTTAGCTGATGCGC > NC_000913/1053411‑1053604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |